Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone15ag1161 ATGACGAAGATATCAGGGAAGGTTCAACCGGCGACATTACCGATCACTTTATCCTCCAAGTTACTGAATCCACCACCTGGAGGCTCAGATCTTCAAGACAGGCCGAGCTCGCGCAAGACGACAAGGCGGAGAATCCAAGGTCCTTCCGCCAGGGTTAAGAGAACCGGAACTTCGGCCGGGAAGCGGAGCAGGCCTGAGACTCCACTTTTGAAGTGGAATACTAAGGAGAGAAGCGACGGCGATGGAGGTGATGGTGATGATGGTGGAGTTAGAGGCAGAGCTGGAGAGTTTGAGAAGGAGGAGGAGAAGAAGAGTTGTCGGAGAGGTTGCCGGAGAGGGAGGAGAGGAAGGGAGGTGGCTGTGGTTTCGGCGAGGAAGCTTGCTGCAGGACTGTGGTGGTTGCATTTTCCGGAGGTAGGTGGTTTTGGTGACGGAGGTAGGAATGGTCTACGGCAGAGAGAGGATCGGCCAAGATTTCAGGCTGGTTTCGAATCAAAGGATCTTTTACGGAGCCCTCATTCAATCTCGGGTCCTGAAAGTGGATTCTTCTACAAGTATTCCAATTCAGCATTGGAGGGGGCGACAAAGTGGGACCCTCTTTGTACAAAACCATCTGATGAGGTACACCAGATATACAGCCAAATGAAGATTATAGACCAACAAGTAAGTGCTAATACAACTATATCTGCACTGAAATCCGATTTAGAGCAAGCCCGGCTACGTATTCAAGAACTCGAGACCGAGCGCAAAAGCTCAAGAAAGAAACTCGATCAGTTCTTGAGGAAAGTTAGTGAAGAGAAGGCCTTATGGAGAAGCAGAGAGCATGAGAAAATCCGGGCATTTATTGATGACATGAAAGCCGAGTTAAACCGGGAAAGGAAAATCCGGCAAAGGGTTGAAATTTTGAATTCCAAATTGGTCAATGAACTGGCCGATATTAAGGTATCTGCTAAACGGTTCATGCAGGACTATGAAAAGGAAAGGAAGGAAAGGGAATTAATCGAGGAAGTGTGTGAAGAACTGGCAAAAGAAATTGGAGAAGACAAGGGAGAAGTAGAAGAGTTAAAGAGAGAATCCCTGAAACTTAGAGAAGAAGTGGAAGACGAAAGGAGGATGCTTCAAATGGCTGAGGTATGGCGTGAAGAACGGGTCCAGATGAAGCTAGTAGATGTCAAGGTGGCAGTTGAAGAGAAATACTCTCAGATGAATAAACTGGTTTTGGATCTCGAAAACTTCCTCATCTCAAAAAATGCAAAAAACCAATTAGATGGAAAGGAGGTAAGAGAAGCCTTGGCTCTGAAGGAAGCTGCTTCCGCTTTAAGTATTCAAGATATCAAGGAGTTTTCTTATGAACCGCCTAACCCAGATGATATTTTTGCCATTTTTGAAGATGTTAATTTTGTAGAAGGAAATGAGAGGGAGATTGAGCAATGTGGTGATATGAATAATAATAATTACAAGGATGGATTTGTTGATCGGATCAACGGTGATCATGAGATTGAAGAAGATGAAAGTGGATGGGAAACTGTGAGTAATATCGATCAAGAAGGCTCAAGTATTTCTCCAGAAGGGAGTGTTCCATCTGTGAATAAGAATTGCAGGGTCAGTAATTGCTCGGTGAGTGGGACCGAATGGGGAGAAGAAAACGAAGGGAGAGAAACCCCAATTAATGAAATAAGTGAGATTTGTCTGGGACCCACGAAGCAAGTGAAGAAGGCATCTTCCTTAGCAAAGCTATGGAAATCTAGGTCGAATAATGGTGAGAACTATAAGATAATTTCGGTTGATGGAATGAACGGTAGGGTTTCAAATGGGAGAATGTCCAATGGAAATGGTTTTTCTCCGGACCGGAAGTTGGACCGAGGTGAGGGTGGGCTTAGCAACCTGGGCTTGGAGTCTCAGTGGAGTTCTCCGGACCGAGGGAAGAAAGGGTGTATTCCTTTAAGCTCACAGAAGCATAGCTTAAAGGCGAAGCTATTGGAGGCAAGATTTGAAAGCCAAAAGGTTCAAATTCGACATCTTCTTAAGCAGAAGACATAG 2040 45.2 MTKISGKVQPATLPITLSSKLLNPPPGGSDLQDRPSSRKTTRRRIQGPSARVKRTGTSAGKRSRPETPLLKWNTKERSDGDGGDGDDGGVRGRAGEFEKEEEKKSCRRGCRRGRRGREVAVVSARKLAAGLWWLHFPEVGGFGDGGRNGLRQREDRPRFQAGFESKDLLRSPHSISGPESGFFYKYSNSALEGATKWDPLCTKPSDEVHQIYSQMKIIDQQVSANTTISALKSDLEQARLRIQELETERKSSRKKLDQFLRKVSEEKALWRSREHEKIRAFIDDMKAELNRERKIRQRVEILNSKLVNELADIKVSAKRFMQDYEKERKERELIEEVCEELAKEIGEDKGEVEELKRESLKLREEVEDERRMLQMAEVWREERVQMKLVDVKVAVEEKYSQMNKLVLDLENFLISKNAKNQLDGKEVREALALKEAASALSIQDIKEFSYEPPNPDDIFAIFEDVNFVEGNEREIEQCGDMNNNNYKDGFVDRINGDHEIEEDESGWETVSNIDQEGSSISPEGSVPSVNKNCRVSNCSVSGTEWGEENEGRETPINEISEICLGPTKQVKKASSLAKLWKSRSNNGENYKIISVDGMNGRVSNGRMSNGNGFSPDRKLDRGEGGLSNLGLESQWSSPDRGKKGCIPLSSQKHSLKAKLLEARFESQKVQIRHLLKQKT 679
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 9406158 9410056 + Conep15aG0119000.1 Cone15ag1161 454289

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cone15ag1161 679 PANTHER GB|AAF24581.1 50 673 IPR043424 -
Cone15ag1161 679 MobiDBLite consensus disorder prediction 68 107 - -
Cone15ag1161 679 MobiDBLite consensus disorder prediction 1 113 - -
Cone15ag1161 679 MobiDBLite consensus disorder prediction 607 644 - -
Cone15ag1161 679 Coils Coil 282 302 - -
Cone15ag1161 679 Coils Coil 324 372 - -
Cone15ag1161 679 MobiDBLite consensus disorder prediction 1 25 - -
Cone15ag1161 679 Coils Coil 228 262 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone15ag1161 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone15ag1161 Cone-Chr15:9406158 Cone5ag1331 Cone-Chr5:7858068 9.56E-10 dispersed
Cone8ag0616 Cone-Chr8:6048702 Cone15ag1161 Cone-Chr15:9406158 3.86E-06 dispersed
Cone14ag1143 Cone-Chr14:9476714 Cone15ag1161 Cone-Chr15:9406158 0 wgd
Cone15ag1161 Cone-Chr15:9406158 Cone6ag0066 Cone-Chr6:350762 4.75E-185 wgd
Cone15ag1161 Cone-Chr15:9406158 Cone9ag0081 Cone-Chr9:360829 1.06E-193 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi19g509 . Blo03g01451 Bda07g00362 Bda09g00401 . Bpe08g01123 Bma10g00547 Bma13g01056 Cmo16g00894 Cmo06g00920 Cma01g01132 Cma09g00953 . Car09g00866 Sed05g0664 Cpe06g00768 Cpe02g00770 Bhi09g01642 Tan01g4552 Cmetu06g1796 . Hepe01g1277 Mch11g1189 . . . . . . . . . . Cone14ag1143 Cone15ag1161 Lsi02g01905 Csa07g01090 . . Blo07g00906 Blo10g00831 . Bda12g00908 Bpe11g00549 . Bma07g01296 Bma14g00337 . Cmo01g01183 Cmo09g00951 . . . Car16g00841 . . . . . . . . . Cla09g01008 Cam09g1065 Cec09g1066 Cco09g1083 . . Cre09g1029 . . . Cme01g01046
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0003664 3 1 3 4 2 1 2 1 1 1 1 1 2 1 1 2 1 4 2 1 1 1 1 1 1 1 1 0 1 2 45