Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone15ag1164 | ATGCTGGAGAGAGACTGCATCTCACTAAGGATCTGCTTGCTAGTTGTGAGAGCATTGAGTGGCAGGAAGGTGGATGAGTTGGACAAAGCTGTTGCTGTAGCAGCAAGAGATCCTGCTTGGTATGGGATTGACGAAGTGGAACTTGAAAAACGAAGGAGGTGGACAAGCACCGCTCGTACTCAGGTTGGAAATGTTAAGAAAGTGGTTGGTGCTGGTAAGGACTTGAGTGGTACTGGTACTACAAGTGCGAGTGGAATGCGCAGGGAGCTAATGAGACTGCCTAACACGAATCAAGGGGACCGGTCCCGCCAGTACTCTGATGACAATGATGATTTCATAGCATCCGAATCAGACCGACAAATGCTTCTCATAAAACAGCAGGATGAGGAGTTGGATGAGCTCAGTGCAAGTGTGCAGAGAATTGGAGGTGTTGGGCTTACTATACATGAAGAACTTCTAGCTCAGGATAAAATTATAGATGAATTAGGTATGGAATTGGAAAGTACATCAAACCGTCTCGATTTTGTTCAGAAAAAGGTCGGATTGTTGATGAAAAAGGCAGGTGCCAAGGGGCAGATAATGATGATATTGTTTTTGGTTGTTCTATTCATCATCCTATTTGTTTTGGTGTTCTTTACCTAA | 642 | 44.39 | MLERDCISLRICLLVVRALSGRKVDELDKAVAVAARDPAWYGIDEVELEKRRRWTSTARTQVGNVKKVVGAGKDLSGTGTTSASGMRRELMRLPNTNQGDRSRQYSDDNDDFIASESDRQMLLIKQQDEELDELSASVQRIGGVGLTIHEELLAQDKIIDELGMELESTSNRLDFVQKKVGLLMKKAGAKGQIMMILFLVVLFIILFVLVFFT | 213 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
15 | 9426505 | 9429857 | - | Conep15aG0119300.1 | Cone15ag1164 | 454292 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone15ag1164 | 213 | SUPERFAMILY | t-snare proteins | 23 | 67 | IPR010989 | GO:0016020(InterPro)|GO:0016192(InterPro) | |
Cone15ag1164 | 213 | Coils | Coil | 159 | 179 | - | - | |
Cone15ag1164 | 213 | ProSiteProfiles | t-SNARE coiled-coil homology domain profile. | 121 | 183 | IPR000727 | - | |
Cone15ag1164 | 213 | FunFam | syntaxin-61 isoform X1 | 124 | 185 | - | - | |
Cone15ag1164 | 213 | SUPERFAMILY | SNARE fusion complex | 119 | 183 | - | - | |
Cone15ag1164 | 213 | Gene3D | - | 123 | 184 | - | - | |
Cone15ag1164 | 213 | SMART | tSNARE_6 | 116 | 183 | IPR000727 | - | |
Cone15ag1164 | 213 | Pfam | SNARE domain | 158 | 209 | IPR000727 | - | |
Cone15ag1164 | 213 | ProSitePatterns | Syntaxin / epimorphin family signature. | 127 | 166 | IPR006012 | GO:0005484(InterPro)|GO:0006886(InterPro)|GO:0016020(InterPro) | |
Cone15ag1164 | 213 | PANTHER | GOLGI SNARE BET1-RELATED | 113 | 206 | - | - | |
Cone15ag1164 | 213 | CDD | SNARE_Qc | 124 | 180 | - | - | |
Cone15ag1164 | 213 | Pfam | Syntaxin 6, N-terminal | 23 | 66 | IPR015260 | GO:0016020(InterPro)|GO:0048193(InterPro) | |
Cone15ag1164 | 213 | Gene3D | - | 17 | 71 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone14ag1146 | Cone-Chr14:9492524 | Cone15ag1164 | Cone-Chr15:9426505 | 9.47E-113 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone15ag1164 | K08500 | - | csv:101212527 | 264.618 |