Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone15ag1202 | ATGGCCTCTTACGCAGATTCATGGATAAAGGAGTACAATGAAGCCCAAAAGCTTGCTGATGATATCAATGGCACGATAACTGAGCGGAGTTCCCTTTCTGTATCTGGACCTGACGCCCAGCGCAGTGCGTCTGCTATAAGGCGGAAGATTACGATATTGGGCACTAGGATTGATACCTTACAGTCCCTTCTATCAAAGCTTCCTGGAAAGCAGCCCATGACAGAGAAAGAGTTGAATCGGCGAAAAGAAATGCTTACAAATTTGAGAACAAAAGTTACAGAGATGTCAACAACATTGAACACGTCAAACTCTGCTAATCGTGAAAGCTTGTTCGATCCAGACACAAAGGCAGAAGATTCCATGAACAGGAAGATGCTAGGACTGGATAACAAAGGCCTTCTTGGTCTCCAACAACAAATTATTAAAGAGCAAGATGAAGGCCTTGAAAAGCTGCAAGAGACTGTTATAAGTACAAAACATATTGCATTGGCAGTAAATGAAGAACTTGACCTTCACACTAGACTAATTGATCAGTTGGACCAACATGTGGATGTTACCGATTCCCGGTTAATGCAAGTGCAGAAGAAATTGGCGATCTTGAACAAGCGAACTAAGGGCTGTGGCTCCTGCGTGTCGATGCTTTTATCCACTTGCGGGATCGTGGGTCTGGTTGTTGTCATATTGCTTCTCATCAAATACTTGTAG | 705 | 43.4 | MASYADSWIKEYNEAQKLADDINGTITERSSLSVSGPDAQRSASAIRRKITILGTRIDTLQSLLSKLPGKQPMTEKELNRRKEMLTNLRTKVTEMSTTLNTSNSANRESLFDPDTKAEDSMNRKMLGLDNKGLLGLQQQIIKEQDEGLEKLQETVISTKHIALAVNEELDLHTRLIDQLDQHVDVTDSRLMQVQKKLAILNKRTKGCGSCVSMLLSTCGIVGLVVVILLLIKYL | 234 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
15 | 9586818 | 9589479 | - | Conep15aG0123100.1 | Cone15ag1202 | 454330 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone15ag1202 | 234 | PANTHER | SYNTAXIN | 8 | 217 | IPR045242 | GO:0000149(PANTHER)|GO:0005484(PANTHER)|GO:0006886(PANTHER)|GO:0006906(PANTHER)|GO:0012505(PANTHER)|GO:0016021(PANTHER)|GO:0031201(PANTHER)|GO:0048278(PANTHER) | |
Cone15ag1202 | 234 | Pfam | SNARE domain | 175 | 226 | IPR000727 | - | |
Cone15ag1202 | 234 | CDD | SNARE_Qc | 141 | 198 | - | - | |
Cone15ag1202 | 234 | SMART | tSNARE_6 | 133 | 200 | IPR000727 | - | |
Cone15ag1202 | 234 | ProSiteProfiles | t-SNARE coiled-coil homology domain profile. | 138 | 200 | IPR000727 | - | |
Cone15ag1202 | 234 | FunFam | syntaxin-51 isoform X2 | 140 | 202 | - | - | |
Cone15ag1202 | 234 | Gene3D | - | 140 | 202 | - | - | |
Cone15ag1202 | 234 | SUPERFAMILY | SNARE fusion complex | 129 | 199 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone14ag1185 | Cone-Chr14:9681715 | Cone15ag1202 | Cone-Chr15:9586818 | 2.85E-111 | wgd | |
Cone15ag1202 | Cone-Chr15:9586818 | Cone6ag0041 | Cone-Chr6:250828 | 4.66E-100 | wgd | |
Cone15ag1202 | Cone-Chr15:9586818 | Cone9ag0047 | Cone-Chr9:243349 | 5.90E-101 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone15ag1202 | K08503 | - | cit:102608030 | 317.775 |