Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone15ag1212 ATGGCTTACCGGCGTGATGTTCCGGCGGAGTGTTGCTCACTCGTTGTCGTACTTCTGCTTGCTCTGGTTTTTCAATCTTTACTGGTTTTCGTCTCTGCTGAAGGAACTAATCTTACCGGTCGCTGGAAAACTTTAAGCGGTGGTGCTCCTTTAGTTGTGGCAAGAGGTGGATTTTCTGGAATTTTTCCAGATTCGAGTTCGTATTCGTACGCTTTGGCTATGCTAGTTAGTGAGCCTGATGTAATTTTATGGTGCGACGTGCAATTAACCAAGGATGGAGTTGGAATCTGCGCTCCAGATCTGAAGCTGGAAAATTCTACTGCCATAGCGATCTCTTTTCCTGAAAGGAACAATGTTTATCTCGTTAATGGAGTCTCGATCAGTGGATTTTTTTCTGTTGATTTTACGGCCGATGAATTATCATCCGTTCCCCTTTCTCAGGGTCTATATATGCGAACCAATAAGTTTGATGGCAATAATTTAAAAATTCTTACTCCTCTAGATGTTGCTGGGCTTAAGCCATCTGGACTATGGCTGAATATTCAGCATGATGCATTCTTCTCACAACACAACTTGAGTATGAGAATCTTTGTACTGTCTATATCCAGAACCGCTATTATTAATTATATATCATCACCAGAAGTGGCCTTCCTAAGAAGTATTACTGCAAGATTTAAGCCAAGTAGAACGAAGCTGATATTTCGGTTCTTAGAAAAAGATCAGTTAGAGCCCACAACCAAACGGAGTTATGGTTCTTTCCTGAAAAATCTCACATTTGTCAAGACATTTGCCTCTGGAATTCTCGTTCCAAAGTATTACATATGGCCAGTGGATGTGGAGGGTTATTTAGAACCTCATACCTCACTGGTGTCAGATGCTCATAAAGAAGGGATAGAAATTTTTGCATCAGAGTTCTATAATGACGTTCCATTGAGCTACAACTACAGTTTCGATCCTGTCTCAGAATACCTTTCTTATATTGATAATGGAGACTTTTCTGTGGATGGCGTACTGTCTGATTTCCCAATAACACCATCAGAAGCAGTCAATTGTTTTTCTCATCTAGGAAAAAGTGATAAAGGCCAAGAAAATCCTTTGGTTATCTCTAGATATGGAGCAAGTGGAGACTATCCTGGTTGTACTGACTTAGCCTATGAGAATGCTATTAAAGATGGTGTAGATGTGCTCGACTGTCCCGTTCAAATGGCTAAAGATGGAACACCTGTTTGCTTAAGCTCTATAAATCTTATAGATAGTACAAATGTTGCTCAAACAAATTTCAGCACCCTCACAAGATCAATTCCAGCAATTAATTCTGGCATGGGGATATTTACCTTCGACCTTTCATGGCCTCAGATAAAGAGCTTGACTCCGGTGATTTTAGATCGCTTTTCAGACTATACATTGCAACGAAATCCCAAGTATAGAAATGAAGGAAGATTATTAACATTGTCTGATTTTTTGTCCTTGACAAAGAACTCCAGCAGTCTTTCTGGTATCTTGATCAGCATAGAGCATGCAGCCTATCTAGCTGAGCAGGGTTTAAATGTAATAGATGCAGTCCTTGATGCCTTAAGCAAAGCTGGTTATGAGAACAAGACTGCTCCTCTAGAAGTTATGATTCAATCCTCAAATAGTTCTGTCCTAACAAAACTCAAGGCTAAAACCAATTACAAGCTTGTATACAAGATAGATGAAAAAATCGAGGATGCAAGTAACTCTACTGTTACTGAAATCAAGAATTTCGCCCATGCTGTCATTATTCGCAAATCTTCCGTCTTTACAACAAATTCCTTGTTCCTCACTGGAACCACAGAGGTTGTACCAAAATTTCAATCCTTTAATCTTCCTGTTTATGTGGAACTCTTCAGCAATGAGTTTGTGTCTCAAGCATGGGACTTCTACTCGGATGCAACTGTGGAAATCAACTCGTTTGTCATGGGAGCCAATATTAATGGTGTCATCACAGATTTCCCGAAAGTGGCGGCTAGATATAAAAAAAACAAATGTTTAAAATTGGGTGTTAAGACACCCATGTACATGAAGCCTGTTCAACCCGGGGATCTTGTCCAGCTCATTACTAGTGAATACCTGCCACCAGCTGAAGCTCCACTTCCTATCCTAAATAACACTGATGTGATAGAGCCGCCACTGCCGCCACTGCCGCCTGTATCAGAGAATGCCCCTCCTCCCACCACGGGCGGCAGTGCAACAATAGCTCCAATAGCACCGCCGCCAAGTGGGCAGCCGGAGATAGCTTCATTCTCCTTTCTAGTCAATCTGGCAATGCTCGGTTCCGTTCTTTTTCTAGTTTGA 2316 41.28 MAYRRDVPAECCSLVVVLLLALVFQSLLVFVSAEGTNLTGRWKTLSGGAPLVVARGGFSGIFPDSSSYSYALAMLVSEPDVILWCDVQLTKDGVGICAPDLKLENSTAIAISFPERNNVYLVNGVSISGFFSVDFTADELSSVPLSQGLYMRTNKFDGNNLKILTPLDVAGLKPSGLWLNIQHDAFFSQHNLSMRIFVLSISRTAIINYISSPEVAFLRSITARFKPSRTKLIFRFLEKDQLEPTTKRSYGSFLKNLTFVKTFASGILVPKYYIWPVDVEGYLEPHTSLVSDAHKEGIEIFASEFYNDVPLSYNYSFDPVSEYLSYIDNGDFSVDGVLSDFPITPSEAVNCFSHLGKSDKGQENPLVISRYGASGDYPGCTDLAYENAIKDGVDVLDCPVQMAKDGTPVCLSSINLIDSTNVAQTNFSTLTRSIPAINSGMGIFTFDLSWPQIKSLTPVILDRFSDYTLQRNPKYRNEGRLLTLSDFLSLTKNSSSLSGILISIEHAAYLAEQGLNVIDAVLDALSKAGYENKTAPLEVMIQSSNSSVLTKLKAKTNYKLVYKIDEKIEDASNSTVTEIKNFAHAVIIRKSSVFTTNSLFLTGTTEVVPKFQSFNLPVYVELFSNEFVSQAWDFYSDATVEINSFVMGANINGVITDFPKVAARYKKNKCLKLGVKTPMYMKPVQPGDLVQLITSEYLPPAEAPLPILNNTDVIEPPLPPLPPVSENAPPPTTGGSATIAPIAPPPSGQPEIASFSFLVNLAMLGSVLFLV 771
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 9632991 9663695 + Conep15aG0124100.1 Cone15ag1212 454340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone15ag1212 771 PANTHER GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE 16 729 - GO:0008889(PANTHER)
Cone15ag1212 771 FunFam Glycerophosphodiester phosphodiesterase GDPDL3 363 666 - -
Cone15ag1212 771 CDD GDPD_SHV3_repeat_2 365 665 - -
Cone15ag1212 771 CDD GDPD_SHV3_repeat_1 50 348 - -
Cone15ag1212 771 Pfam Glycerophosphoryl diester phosphodiesterase family 372 660 IPR030395 GO:0006629(InterPro)|GO:0008081(InterPro)
Cone15ag1212 771 SUPERFAMILY PLC-like phosphodiesterases 49 348 IPR017946 GO:0006629(InterPro)|GO:0008081(InterPro)
Cone15ag1212 771 ProSiteProfiles GP-PDE domain profile. 50 349 IPR030395 GO:0006629(InterPro)|GO:0008081(InterPro)
Cone15ag1212 771 MobiDBLite consensus disorder prediction 718 743 - -
Cone15ag1212 771 Gene3D Phosphatidylinositol (PI) phosphodiesterase 363 666 IPR017946 GO:0006629(InterPro)|GO:0008081(InterPro)
Cone15ag1212 771 Gene3D Phosphatidylinositol (PI) phosphodiesterase 49 348 IPR017946 GO:0006629(InterPro)|GO:0008081(InterPro)
Cone15ag1212 771 ProSiteProfiles GP-PDE domain profile. 365 666 IPR030395 GO:0006629(InterPro)|GO:0008081(InterPro)
Cone15ag1212 771 FunFam Glycerophosphodiester phosphodiesterase GDPDL3 48 348 - -
Cone15ag1212 771 SUPERFAMILY PLC-like phosphodiesterases 364 665 IPR017946 GO:0006629(InterPro)|GO:0008081(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone15ag1212 Cone-Chr15:9632991 Cone4ag0607 Cone-Chr4:2796663 6.70E-203 dispersed
Cone14ag1192 Cone-Chr14:9726814 Cone15ag1212 Cone-Chr15:9632991 0 wgd
Cone15ag1212 Cone-Chr15:9632991 Cone6ag0036 Cone-Chr6:216015 0 wgd
Cone15ag1212 Cone-Chr15:9632991 Cone9ag0039 Cone-Chr9:167576 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone15ag1212 - - - 0.0