Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone15ag1218 ATGAAGCAGAGCAGCAAAGAGACTTCTGAGACTCGGTTCTTAGGAAGCATTTCTGCTTCGTCGATTCGAAATCTGCTTCCCAGATCAATCTCGTCTAAGAAGAAACTCAATGAAAACCTTAAATTTTCCATATTCAACTCTGAGAACACACCGCCTGTAGATCCAAATGTTCGGATTAACAGTGACGAGATCTCTGTCTCTATTGTGAAACAGTCACAGACTGAAATGTTGAATTCTCAGCAGGATACTGCCGGAAGAGATGATCTGCATGAAGTATCTTCAGATCCGAATCCATCTTTGAAGGGAGGATTAACGCAATTGGATCCTCAGCATGAAGTACCTTTGCCTTGTGGCCCACCGGTCAAGGTTGTTGTGAGAATTAGACCGGCGAACGGAAATGAAAGGGATAGTGAACGATCAGTGAAGAAGGTCTCTTCAGATACCTTATCTGTAGGGGATCGGCAATTTACATTTGATTCAGTTTTTGACTCAAATTCGAAACAGGAAGATATCTTTCACTCAGTTGGTGTTCCAATGGTTAAAAATGCATTAGCAGGTTACAACACTTCGATATTGTCATACGGCCAGACTGGAAGTGGTAAGACATACACAATGTGGGGTCCGCCGAGTGCCATGTTTGAGAGTGTCTCGGTCGACAGTAACCTAGGCATTGTTCCTCGCATCTTCCAAAAGCTATTCTCTGAGATTCAGAAAGAGCAAGAGAACTCTGATGGAAAACAGATTAACTATCAGTGCCGTTGTTCTTTTCTGGAGATATACAATGAGCAAATAGGGGATTTGCTTGATACTACTCAGAGGAATCTTCAGATAAAAGAGGATCCCAAAAATGGAGTGTACTTTGAGAATTTAACTGAGGAGTATGTCACGAGTCATGAGGATGTAACACAAATTTTGATCAAGGGGCTTTCAAGCAGAAAGGTAGGAGCAACCTCGATAAATTCTAAGAGCTCTAGGTCCCATATCGTGTTCACTTTCACAATTGAATCATGGTGCAAGGGAACTACATCCAAGTGTTTTGGAAGTTCAAAAACAAGCAGAATCAGCCTTATTGATCTTGCCGGACTGGATAGTAATATAGGTGATGATGCTGGTAGACAATGTACAAGAGAAGGCAAAAATGTGAAGAAGTCATTATCCCGGCTTGGGCACTTGGTGAAAACACTTGGGAAAGGAAGTCAATCAGAAAATTTGTATCGAAGCTCATGTTTGACGCACTTACTAAGAGAATCACTTGGTGGCAATGCCATGCTCACTGTTATCTGTGCCATCTCCTCTGATAACAGCTATAGTGGTGAAACGCTAAGAACACTTAGATTTGGACAAAGACTGAAATCCATAAAAAACGAGCCAGTGATAAATGAAATTACAGAGGATGATGTTGATGATCTGAGTGATCGAATTCGTCAGCTAAAGGAAGAGCTTATTAGAGCAAAGTCTAGTAATGAATGCAATTCACTTGGTAGTAACCACGGATACTTTCAAGGCAGGAATGTACGTGAAAGCTTGAATCAACTGAGAGTTAGTCTTAATCGGTCTTTAATTCTACCCCATATTGATAATGGTGATTCTGATGAAGAACTGAAATTTGATGAAGAAGAAGATATCAGGGAACTGCATCAGCATTTAGAGAAGTTGCACGGGGAAGAAGAGAACTCAGAAAACTCATCTGTTAAAAGAGATTCCCTCCAATTCTCTTCTGTAGCTGAAAGTTTCCACACTGACCTTTCAAGCGATGATGATGATGATGAAGCAATTTCTCCAGAAGAAATCATAGTTGAAGAAATAAGTCTCGAAAATCCTAAGAAGGACACCTCAAGGGCTAGCATTTCAGTCAGCTCAATTGGGCGGTCCTCTATTCTTGAAGATCCACCATTGTCTGAATCTCCAAAAATCAGAAACTCTCCAAGGAGGAGCATGGCTTTTGTATCGGAAAGCTCTAAGCTTAAGGAAGATAATATACTGAGGCAGTCGCTAAATCAGAGCCAGCCGCCGATTAGATCTTCATTTCAATCAAGTAGAGTATTTATGGGCCCCACTGAGTCTCTGGCAGCTAGTCTTCAAAGAGGGTTGAAGATCATTGACAATCATCAGAGAAACTCAGGATCAAACAAATCTTCAGTGGTCGCCTTCTCATTTGAGCATCTAGCATTGAAACCATCTCCTGAAGTAGATAAAGCCAACTATACTTCTTCAGAGGGAGGACCTACCTCTTACCTTTGTACATCTTGCAGAAGAAGAATTTACGAAAATGACACTGATGATGTCCAGGATAGCTTGAAGACATGGATTGTAGCTGCTGATGAACCTGGAGATACCAACAAACTTGCCAATGAAATGTCCAAGATGGAGCAAAACAAGCATGAGAATGAGATTGTACCATTCGAGGGATCCAAAGGCGACAAGCATTTTGAGGACAATCACAATGGAAAGGACAAATGTGAAATAAAGGAAGTCCAGGGAGGGATAAAAAATTGTGAGCATGGTAATGGATTCTCTGATGCCAATGAGAAGGAAGAACTTCTCAAGGAAATCGAAATTCTAAGAAATAAGTTGCAGACATTTTCCGATGTGTCTGCTAACAAATCTACTGACAAGCTAAGATCCTCATTATTGTCACGATCCATGCAGCTTCGGAAAAGCAATCTGGGTTTTCCAGGTAATAATAATAGTGAGGAAGAACTTGAGAAGGAAAGAGAGAGATGGACAGAAATGGAGAGCGAATGGATTTCCTTAACAGATGATCTCAAAATGGACCTTGAATCAAATCGGAGAAGAGCAGAGAAGGTAGAGAATGAATTGAGGAAGGAGAAGAAATGCACGGAAGAGTTAGATGATGCACTTCATAGAGCAGTTATAGGACATTCTAGATTTATTGAGCACTATACTGAATTACAAGAGAAATACAATGACTTAGCCGCAAGGTATAGAGCCATTATGGAAGGAATAGCAGAGGTGAAAAGGGCAGCAACAAAAGCCGGAGCTAAAGGTCATGGGTCACGCTTTGCCAAATCCCTTGCTGCAGAGCTTTCTGCATTGAGGGTGGAAAGAGAGAGGGAGAAGGATTTATTGAAGAAGGAAAATAAAAGCCTTAGAATTCAACTAAGAGATACTGCAGAAGCTGTTCATGCCGCTGGAGAATTACTTGTTCGGCTTAGGGAAGCTGAGCAATCAGCATCATCCGCAGAGGATAATTTTTCAAGGGTGCAGCAAGAGAATGAGAATTTGAAGAAGCAAATGGAGAAGATGAAAAGAAAGCACAAGATGGAGATGGTTACTATGAAGCAGTACCTTGCAGATAGCAGATTGCCAGCATCAGCATTGCAACCGCTGTATCGGGAGGATTCTGACACGACGCTCGATAAAAACGGGCCCACTTTTGATGATGATCAAGCATGGAGAGCAGAATTTGGAGCCATTTATCAAGAGCATTACTAG 3456 41.41 MKQSSKETSETRFLGSISASSIRNLLPRSISSKKKLNENLKFSIFNSENTPPVDPNVRINSDEISVSIVKQSQTEMLNSQQDTAGRDDLHEVSSDPNPSLKGGLTQLDPQHEVPLPCGPPVKVVVRIRPANGNERDSERSVKKVSSDTLSVGDRQFTFDSVFDSNSKQEDIFHSVGVPMVKNALAGYNTSILSYGQTGSGKTYTMWGPPSAMFESVSVDSNLGIVPRIFQKLFSEIQKEQENSDGKQINYQCRCSFLEIYNEQIGDLLDTTQRNLQIKEDPKNGVYFENLTEEYVTSHEDVTQILIKGLSSRKVGATSINSKSSRSHIVFTFTIESWCKGTTSKCFGSSKTSRISLIDLAGLDSNIGDDAGRQCTREGKNVKKSLSRLGHLVKTLGKGSQSENLYRSSCLTHLLRESLGGNAMLTVICAISSDNSYSGETLRTLRFGQRLKSIKNEPVINEITEDDVDDLSDRIRQLKEELIRAKSSNECNSLGSNHGYFQGRNVRESLNQLRVSLNRSLILPHIDNGDSDEELKFDEEEDIRELHQHLEKLHGEEENSENSSVKRDSLQFSSVAESFHTDLSSDDDDDEAISPEEIIVEEISLENPKKDTSRASISVSSIGRSSILEDPPLSESPKIRNSPRRSMAFVSESSKLKEDNILRQSLNQSQPPIRSSFQSSRVFMGPTESLAASLQRGLKIIDNHQRNSGSNKSSVVAFSFEHLALKPSPEVDKANYTSSEGGPTSYLCTSCRRRIYENDTDDVQDSLKTWIVAADEPGDTNKLANEMSKMEQNKHENEIVPFEGSKGDKHFEDNHNGKDKCEIKEVQGGIKNCEHGNGFSDANEKEELLKEIEILRNKLQTFSDVSANKSTDKLRSSLLSRSMQLRKSNLGFPGNNNSEEELEKERERWTEMESEWISLTDDLKMDLESNRRRAEKVENELRKEKKCTEELDDALHRAVIGHSRFIEHYTELQEKYNDLAARYRAIMEGIAEVKRAATKAGAKGHGSRFAKSLAAELSALRVEREREKDLLKKENKSLRIQLRDTAEAVHAAGELLVRLREAEQSASSAEDNFSRVQQENENLKKQMEKMKRKHKMEMVTMKQYLADSRLPASALQPLYREDSDTTLDKNGPTFDDDQAWRAEFGAIYQEHY 1151
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 9685401 9690563 - Conep15aG0124700.1 Cone15ag1218 454346

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cone15ag1218 1151 SMART kinesin_4 118 461 IPR001752 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro)
Cone15ag1218 1151 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 121 487 IPR027417 -
Cone15ag1218 1151 Coils Coil 894 914 - -
Cone15ag1218 1151 Coils Coil 460 487 - -
Cone15ag1218 1151 Pfam Kinesin motor domain 137 453 IPR001752 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro)
Cone15ag1218 1151 ProSiteProfiles Kinesin motor domain profile. 120 453 IPR001752 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro)
Cone15ag1218 1151 Gene3D Kinesin motor domain 119 495 IPR036961 -
Cone15ag1218 1151 Coils Coil 844 864 - -
Cone15ag1218 1151 Coils Coil 1051 1099 - -
Cone15ag1218 1151 Coils Coil 919 953 - -
Cone15ag1218 1151 MobiDBLite consensus disorder prediction 600 619 - -
Cone15ag1218 1151 MobiDBLite consensus disorder prediction 625 652 - -
Cone15ag1218 1151 FunFam Kinesin-like protein KIN-12F 117 492 - -
Cone15ag1218 1151 PANTHER KINESIN-LIKE PROTEIN KIN-12D 121 489 IPR044986 -
Cone15ag1218 1151 MobiDBLite consensus disorder prediction 72 103 - -
Cone15ag1218 1151 Coils Coil 1009 1047 - -
Cone15ag1218 1151 PRINTS Kinesin heavy chain signature 403 424 IPR001752 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro)
Cone15ag1218 1151 PRINTS Kinesin heavy chain signature 317 334 IPR001752 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro)
Cone15ag1218 1151 PRINTS Kinesin heavy chain signature 353 371 IPR001752 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro)
Cone15ag1218 1151 PRINTS Kinesin heavy chain signature 186 207 IPR001752 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro)
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone15ag1218 K10400 - - mdm:103427986 1251.88
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag0594 Cone-Chr11:3631330 Cone15ag1218 Cone-Chr15:9685401 1.27E-120 dispersed
Cone15ag1218 Cone-Chr15:9685401 Cone18ag0912 Cone-Chr18:6488216 1.27E-173 dispersed
Cone14ag1198 Cone-Chr14:9742909 Cone15ag1218 Cone-Chr15:9685401 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi19g604 . . . . Bpe09g00138 . Bma10g00586 Bma13g01105 Cmo16g00977 . . . . . . . . . . . . . . . Cla10g00437 Cam10g0436 Cec10g0458 Cco10g0447 Clacu10g0444 Cmu10g1275 Cre10g0691 . . Cone14ag1198 Cone15ag1218 . Csa03g00446 . Cme06g02803 Blo07g00875 . Bda05g00688 . . Bpe03g00762 . . . . . . Cma16g00939 . Car16g00903 Cpe14g00763 . Bhi11g00510 . . . . . . . . . . . . . Lsi05g00529 . Chy06g01871 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0004807 2 1 1 2 2 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 1 0 4 1 1 40