Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone15ag1224 | ATGTTACACCATGTTCCTGATGAAAGCGTCGAAAATAGCCAAAACCACCGCGATAGGTTATTGAGGCTAGTCAAGAGCTTATCTCCAAAAATTATGACTGTAGTCGAACAGGAGTGTAACACCAACACATCATTTCTACCTCGTTTTATCGAAACATTGAGATATTACACGTCGATTTTTGAGTCGATAGACGTGACATTGTCGAGGCAGGACAAGGAGAGGATCAATGTAGAACAAAATTGTCTGGCTCGAGATATTGTGAACATTATAGCATGTGAGGGGAAGGAGAGAATCGAACGGCACGAACTTCTCAAGAAATGGAGGACTCGGGTTGTTAAGGCCGGGTTTAGACCGTACCCATTAAGCTCATTTGTTAATTCTACGATCGAGGGTTTGTTGAAGAATTATAGTGAGAAGTATACTCTTGAGGAAAGAGATGGTGCTTTATATCTTGGATGGGAGAATCAGCCTTTGGTTGTTTCTTGTGCTTGGAGTTGA | 498 | 41.77 | MLHHVPDESVENSQNHRDRLLRLVKSLSPKIMTVVEQECNTNTSFLPRFIETLRYYTSIFESIDVTLSRQDKERINVEQNCLARDIVNIIACEGKERIERHELLKKWRTRVVKAGFRPYPLSSFVNSTIEGLLKNYSEKYTLEERDGALYLGWENQPLVVSCAWS | 165 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
15 | 9727275 | 9727772 | - | Conep15aG0125300.1 | Cone15ag1224 | 454352 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone15ag1224 | 165 | Pfam | GRAS domain family | 1 | 164 | IPR005202 | - | |
Cone15ag1224 | 165 | ProSiteProfiles | GRAS family profile. | 1 | 165 | IPR005202 | - | |
Cone15ag1224 | 165 | PANTHER | OSJNBA0084A10.13 PROTEIN-RELATED | 2 | 164 | IPR005202 | GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0043565(PANTHER) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone15ag1224 | Cone-Chr15:9727275 | Cone3ag1294 | Cone-Chr3:31806914 | 1.36E-77 | dispersed | |
Cone14ag1207 | Cone-Chr14:9818414 | Cone15ag1224 | Cone-Chr15:9727275 | 1.20E-107 | wgd | |
Cone15ag1224 | Cone-Chr15:9727275 | Cone5ag1816 | Cone-Chr5:12832470 | 8.35E-61 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
44909 | PF00025 | Arf | 1.60E-69 | CL0023 | Cone | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone15ag1224 | K27748 | - | rcu:8284784 | 257.299 |