Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone15ag1224 ATGTTACACCATGTTCCTGATGAAAGCGTCGAAAATAGCCAAAACCACCGCGATAGGTTATTGAGGCTAGTCAAGAGCTTATCTCCAAAAATTATGACTGTAGTCGAACAGGAGTGTAACACCAACACATCATTTCTACCTCGTTTTATCGAAACATTGAGATATTACACGTCGATTTTTGAGTCGATAGACGTGACATTGTCGAGGCAGGACAAGGAGAGGATCAATGTAGAACAAAATTGTCTGGCTCGAGATATTGTGAACATTATAGCATGTGAGGGGAAGGAGAGAATCGAACGGCACGAACTTCTCAAGAAATGGAGGACTCGGGTTGTTAAGGCCGGGTTTAGACCGTACCCATTAAGCTCATTTGTTAATTCTACGATCGAGGGTTTGTTGAAGAATTATAGTGAGAAGTATACTCTTGAGGAAAGAGATGGTGCTTTATATCTTGGATGGGAGAATCAGCCTTTGGTTGTTTCTTGTGCTTGGAGTTGA 498 41.77 MLHHVPDESVENSQNHRDRLLRLVKSLSPKIMTVVEQECNTNTSFLPRFIETLRYYTSIFESIDVTLSRQDKERINVEQNCLARDIVNIIACEGKERIERHELLKKWRTRVVKAGFRPYPLSSFVNSTIEGLLKNYSEKYTLEERDGALYLGWENQPLVVSCAWS 165
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 9727275 9727772 - Conep15aG0125300.1 Cone15ag1224 454352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone15ag1224 165 Pfam GRAS domain family 1 164 IPR005202 -
Cone15ag1224 165 ProSiteProfiles GRAS family profile. 1 165 IPR005202 -
Cone15ag1224 165 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 2 164 IPR005202 GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0043565(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone15ag1224 Cone-Chr15:9727275 Cone3ag1294 Cone-Chr3:31806914 1.36E-77 dispersed
Cone14ag1207 Cone-Chr14:9818414 Cone15ag1224 Cone-Chr15:9727275 1.20E-107 wgd
Cone15ag1224 Cone-Chr15:9727275 Cone5ag1816 Cone-Chr5:12832470 8.35E-61 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
44909 PF00025 Arf 1.60E-69 CL0023 Cone TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone15ag1224 K27748 - rcu:8284784 257.299