Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone15ag1246 ATGAAAGCAATGCGTACTAGAAAGTTTCTTGTTTTCATGCTCGTCTTCTACATCACCTTCCTAACCAGCCCACTTCATCTAGTCCTCGTCTCATCCCAAAGCGTCAGTTTCGACTTCCACTCCTTCAACCTCCGGAACCTAACTCTAGTCGGCGACTCCCATCTCCGAAACGGCGTCGTCGGACTCACCAAAGAGCTCGGAGTGCCTTCCTCAAGCTCCGGCGCTGTATTCTACAACCACCCTGTCAGATTCTTCGACTCGGAATCCAACATTACTTCCTCTTTCTCAACGAGATTCTCTTTCTCCATCCCTAATGTGAACCCTAGCTCGTCTGGAGACGGCTTCACTTTCTTCCTTTCCCAAAATAATCAAACCCTTGGCCTACCGAGATCCTATTTGGGTCTTTTCAATTCAACCCAGTTGATCAAACACGATTTTTTAGCGGTTGAATTTGATACCCATCTTGATTTCAATTACAATGACCCGGATGATAATCATGTGGGTTTAGATGTTCAGAGTTTGAGTTCAGTCAAGACAGCAAATCCGATTTCTCAAGGGATTGATTTGAAGAGTGGGAATTGGACTACAGCTTGGATTGATTACAAAAACGATGAGAAAAATCTTAAGGTATTTCTAAGCAATTTGAGTTTTAAGCCTCAAAATCCACTGTTGAGTGTGGATATTGATCTTTCTGACCATCTTAAAGAGTTTATGTACGTGGGCTTTTCGGGTTCAACTGAAGGAAGCACTGAGCTGCATTTGATTCAAAATTGGAGCTTTCATGTTTCCGGGTTTGTTCCGGTTAGACCAAGATTATGTCCTCATAATGTATCTGATAGTTCAGTTATAGAACCAAGCCCAAAAATCCCTGTTTCTAATTCTACTAATAGTACTGGTTTTCACAAGAAGCTCGGTTTAGGCCTTGCAATCGCTGGGCCTGGTTTCTTCTGTGTAGCCCTTGCCGTTTTCGGGTACATCTCAGTCCGAAAATGGAGAAACTTCCAAACCCAAAAGTGCTTTAAGGCAGAGGTTTTTTCCGGGCCAAGAGAATTCACGTACAGAGAGCTAAAATCTGCCACAAAAGGGTTTCATTCAAGCCGCATTATAGGGCATGGAGCTTTCGGTACGATCTACAAAGCCTTTTTCATATCTTCAGGAACAATTTCTGCAGTGAAAAGATCGAAACACTCCCATGAAGGTAAAACCGAATTTCTTGCTGAATTATCAATCATAGCTTGTTTAAGACATAAGAATCTAGTCCAACTCCAAGGATGGTGTGTTGAAAAAGATGAACTGCTTCTAGTGTATGATTTCATGCCTAATGGAAGCCTAGATAATCTGCTTCACCATGAATTGGGCGAAGAAAGCTTACTGAAATGGACTCATAGGTATAATATCTCAATTGGGTTGGCCTCGGTTTTGACCTATTTGCATGAAGAATGTGAGCAGCAAGTTATTCATAGAGACATCAAGGCGGGAAACATATTACTAGATGGAAACTACAGTGCTAGATTGGGGGATTTTGGATTGGCGAAAATAATGGATCATGATAAGAGTCCGGATTCGACTCTTACAGCCGGTACTATGGGGTATCTTGCACCGGAATATCTTCAATACGGAAAAGCTACGGAAAACACAGACATTTTCAGCTATGGAGTGGTTGTGCTTGAAACTGCCTGTGGGAAGAGACCTATAGAGAGGGAAGAAGCCAGTCAGAAGATGGTGAATTTGGTAGATTGGGTTTGGGGATTGCATTCCCAAGGGAGGATTATTGAAGCGGGCGATAAGAGATTGAAAGGGGAGTTTGTAGAAGAGGAGATGAAGAAGTTGCTGCTTGTTGGGTTGAGTTGTGCTAATCCGGATAGCTCAGAAAGGCCATCTATGAGACGGGTTTTGCAAATATTGAATGACGATGTGGAGCCTTTGACAGTTCCGAAGCTGAAGCCGAGTTTGACGTTTTCATCTGGGGTTGTGTTAACCTTGAATGATATTGTTTCAGATGATGATGGTGATTGGGAGATGCCAAGGCCTATGTTTGATATCAAGATTGAATGA 2055 42.68 MKAMRTRKFLVFMLVFYITFLTSPLHLVLVSSQSVSFDFHSFNLRNLTLVGDSHLRNGVVGLTKELGVPSSSSGAVFYNHPVRFFDSESNITSSFSTRFSFSIPNVNPSSSGDGFTFFLSQNNQTLGLPRSYLGLFNSTQLIKHDFLAVEFDTHLDFNYNDPDDNHVGLDVQSLSSVKTANPISQGIDLKSGNWTTAWIDYKNDEKNLKVFLSNLSFKPQNPLLSVDIDLSDHLKEFMYVGFSGSTEGSTELHLIQNWSFHVSGFVPVRPRLCPHNVSDSSVIEPSPKIPVSNSTNSTGFHKKLGLGLAIAGPGFFCVALAVFGYISVRKWRNFQTQKCFKAEVFSGPREFTYRELKSATKGFHSSRIIGHGAFGTIYKAFFISSGTISAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLQGWCVEKDELLLVYDFMPNGSLDNLLHHELGEESLLKWTHRYNISIGLASVLTYLHEECEQQVIHRDIKAGNILLDGNYSARLGDFGLAKIMDHDKSPDSTLTAGTMGYLAPEYLQYGKATENTDIFSYGVVVLETACGKRPIEREEASQKMVNLVDWVWGLHSQGRIIEAGDKRLKGEFVEEEMKKLLLVGLSCANPDSSERPSMRRVLQILNDDVEPLTVPKLKPSLTFSSGVVLTLNDIVSDDDGDWEMPRPMFDIKIE 684
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 9822936 9824990 + Conep15aG0127500.1 Cone15ag1246 454374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone15ag1246 684 ProSiteProfiles Protein kinase domain profile. 363 643 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone15ag1246 684 FunFam L-type lectin-domain containing receptor kinase VIII.1 439 653 - -
Cone15ag1246 684 ProSitePatterns Legume lectins beta-chain signature. 147 153 IPR019825 -
Cone15ag1246 684 FunFam L-type lectin-domain containing receptor kinase VIII.1 33 273 - -
Cone15ag1246 684 SUPERFAMILY Protein kinase-like (PK-like) 345 661 IPR011009 -
Cone15ag1246 684 ProSitePatterns Protein kinases ATP-binding region signature. 369 392 IPR017441 GO:0005524(InterPro)
Cone15ag1246 684 Gene3D Transferase(Phosphotransferase) domain 1 439 654 - -
Cone15ag1246 684 CDD lectin_legume_LecRK_Arcelin_ConA 35 264 IPR001220 GO:0030246(InterPro)
Cone15ag1246 684 Gene3D - 32 266 - -
Cone15ag1246 684 Gene3D Phosphorylase Kinase; domain 1 325 438 - -
Cone15ag1246 684 SMART serkin_6 363 640 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone15ag1246 684 Pfam Legume lectin domain 34 264 IPR001220 GO:0030246(InterPro)
Cone15ag1246 684 SUPERFAMILY Concanavalin A-like lectins/glucanases 34 267 IPR013320 -
Cone15ag1246 684 CDD STKc_IRAK 369 636 - -
Cone15ag1246 684 FunFam L-type lectin-domain containing receptor kinase VIII.1 327 438 - -
Cone15ag1246 684 ProSitePatterns Serine/Threonine protein kinases active-site signature. 485 497 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone15ag1246 684 PANTHER - 39 645 IPR050528 GO:0002229(PANTHER)|GO:0005886(PANTHER)|GO:0042742(PANTHER)
Cone15ag1246 684 Pfam Protein kinase domain 363 633 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone15ag1246 Cone-Chr15:9822936 Cone19ag1265 Cone-Chr19:8645615 1.02E-194 dispersed
Cone14ag1225 Cone-Chr14:9937651 Cone15ag1246 Cone-Chr15:9822936 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82174 PF12894 ANAPC4_WD40 0.00011 CL0186 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone15ag1246 - - - 0.0