Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone15ag1256 | ATGTTATACCTTCATCAAGATTCAAGATTAAGAATAATTCATAGAGATCTGAAGACGAGCAATGTTCTATTAGACGCCGATTTAAACCCCAAAATAGCAGATTTTGGCATGGCAAGAATTTTCGGAGGGGATCAAATGGAAGCCAATACCACTCGAGTTGTTGGAACATACAGTTATATGTCTCCAGAATATGCTATGGAAGGGTTATTTTCGATAAAGTCAGACGTATACAGCTTTGGAGTTTTGCTCTTAGAGATCATTACTGGTAGAAAGAACAGCAATTACTACCATGACGAATCATCTTTGAATCTAGTCGGCCATGTTTGGAAGTTATGGAAAGAAGGGAGAGGAATGGAAATAGTTGACACAACCTTGGATGAATCCGATTATGGTGAGATTGTAAGATATGTACACATTGGGCTGTTGTGCGTGCAGGAGCAGGCAGCTGATCGACCCAAAATGTCGGCAGTTGTGTTCATGTTAAGCAATGACGTGCCACTTCCGACACCAAAACAGCCTGCATTCATTATAAAGAGAAACTATAATTGCAATCACGGAACAGATCCATCTACCAGTGAAGGAGCTAATTCTGCAAATGACCTAACTTTTACTGTTCTTGAAGCTCGTTGA | 630 | 40.16 | MLYLHQDSRLRIIHRDLKTSNVLLDADLNPKIADFGMARIFGGDQMEANTTRVVGTYSYMSPEYAMEGLFSIKSDVYSFGVLLLEIITGRKNSNYYHDESSLNLVGHVWKLWKEGRGMEIVDTTLDESDYGEIVRYVHIGLLCVQEQAADRPKMSAVVFMLSNDVPLPTPKQPAFIIKRNYNCNHGTDPSTSEGANSANDLTFTVLEAR | 209 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 15 | 9907803 | 9908708 | + | Conep15aG0128500.1 | Cone15ag1256 | 454384 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone15ag1256 | 209 | Pfam | Protein tyrosine and serine/threonine kinase | 1 | 158 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
| Cone15ag1256 | 209 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase | 1 | 168 | - | - | |
| Cone15ag1256 | 209 | SUPERFAMILY | Protein kinase-like (PK-like) | 1 | 161 | IPR011009 | - | |
| Cone15ag1256 | 209 | SMART | tyrkin_6 | 1 | 161 | IPR020635 | GO:0004713(InterPro)|GO:0006468(InterPro) | |
| Cone15ag1256 | 209 | Pfam | Domain of unknown function (DUF3403) | 162 | 209 | IPR021820 | GO:0004674(InterPro) | |
| Cone15ag1256 | 209 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 12 | 24 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
| Cone15ag1256 | 209 | ProSiteProfiles | Protein kinase domain profile. | 1 | 175 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
| Cone15ag1256 | 209 | PANTHER | RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 | 1 | 176 | - | GO:0004674(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER) | |
| Cone15ag1256 | 209 | Gene3D | Transferase(Phosphotransferase) domain 1 | 1 | 166 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone15ag1256 | Cone-Chr15:9907803 | Cone9ag1060 | Cone-Chr9:5810152 | 1.83E-133 | dispersed | |
| Cone15ag1256 | Cone-Chr15:9907803 | Cone15ag1260 | Cone-Chr15:9942343 | 1.28E-143 | proximal |
Transcription factors information
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| 82179 | PF13041 | PPR_2 | 1.40E-08 | CL0020 | Cone | PK |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone15ag1256 | - | - | - | 0.0 |