Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone15ag1269 ATGGCTCCAGAGCATGGATCGATGCAGCGTATAACCGAAAAGAGTGATGTGTACAGTTTTGGAGTAGTCCTATTAGAAGTTCTAACCGGAAAGCATCCATTGGACCCCACTTTGCCCGGGGGAGCAAACTTGGTTCAATGGGTCCGAGACCACTTAGGAAGGAAGAGAAATCCAGTCGAAATTCTCGACCCGAAGCTTCAAGGCCGGGCGGACCCCACAATGCATGAGATGCTACAGACATTGGCTGTTTCGTTTCTCTGTGTTAGTAACCAAGCCGATGATAGGCCAGTGATGAAAGATGTGGTCGCTATGCTCAAGGAAATCCGACATGTCGAGTTATCGAGGTCCGAGAATAACGTGTTGAAAGGAGGCGGAGTGTCTGCCGTCGAGCCATCGGCAGTAACCCCAGCTAGGAAAGTAGTTGTTTCATCACAAGGATCCTCCGATTGTTCATTTGCTTTCTCTGATGATTCTGTTTAA 480 48.54 MAPEHGSMQRITEKSDVYSFGVVLLEVLTGKHPLDPTLPGGANLVQWVRDHLGRKRNPVEILDPKLQGRADPTMHEMLQTLAVSFLCVSNQADDRPVMKDVVAMLKEIRHVELSRSENNVLKGGGVSAVEPSAVTPARKVVVSSQGSSDCSFAFSDDSV 159
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 9993704 9994277 + Conep15aG0129800.1 Cone15ag1269 454397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone15ag1269 159 Pfam Protein tyrosine and serine/threonine kinase 1 104 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone15ag1269 159 Gene3D Transferase(Phosphotransferase) domain 1 1 124 - -
Cone15ag1269 159 ProSiteProfiles Protein kinase domain profile. 1 113 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone15ag1269 159 SUPERFAMILY Protein kinase-like (PK-like) 1 111 IPR011009 -
Cone15ag1269 159 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 1 109 IPR051564 GO:0016020(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone15ag1269 Cone-Chr15:9993704 Cone16ag0085 Cone-Chr16:455027 1.55E-47 dispersed
Cone15ag1269 Cone-Chr15:9993704 Cone14ag1244 Cone-Chr14:10050867 3.05E-95 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82182 PF01777 Ribosomal_L27e 3.00E-31 No_clan Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone15ag1269 - - - 0.0