Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone15ag1299 ATGGATTTGGAAAGCAAGTGTTCTGCCCTCGAATCTGTGGAGGATAATGATCTAACTACACAATCAGCCCCTCCCGAAGATGACAACGAAGTTATGACTAATGGCTCTTCTATTGACACGCCGGGTTCTGCTGGAAATGTTCTTGATACATCCAATACAACAACTTTGCCAACAGATACCAGAGAAATAGTTCTTGACAGGGAACAGAATGAGACTTCTCCTACATTGGCAGTCAAATCACCTAGTTCAGAGTCTCCAACCACTAAAGGACGTGGACTGAGGAAATGGAGGCGAATTAAGAGAGATTTCATCGAGGACAAGAGTGCCCCTGTAGATATTAGTAAAGCTCTTAAACGGGGGTTCTCCACTTCTTCAATCCAGAATAAACCCCAGCATTTGATGAAGCAGAGTAGTGAAGGTTCTCTCAGGCCTGTGCTGCCAGTTGATGGCATGGTTTTTCATGGCTCCAGTTCTAATTCTAATTCTAGGCATGCAGTCAATCCTGCTTTTGCTCCCAATGCCAATTCTGAGAATAGTGAGGATGTGAGCAGTAGATCTTCCACAGCGGCCAGTGCTCCAAAGATGAGGTATGAGCCATCTTCTGGGCGTGTGTGGGAAAAGAACAGAGTGAAGAGTGTGAACGCGAAGAACTCTGGGAATTTTTCTCCGCGGGTTCAGCAACAAAAGGACCAGATCGAAGGCAGTAAGAAGGCTAGAGGAGAAAAGATCAAAATTGAGAAAGAAAACTCTCATTCTAGCTTGGAATCTGATTCAATAAGCTCCAACTATGTCTTTATGCTGGGTGCTTATAATGCAACTAGTAATGGGAAGCAAAGTGGAAGGTCAATGAATTATGATGGAGAGAGTGAAGAAGCTCATGCAAGCGCACAAAAGTTTGGAGAGGGAGTTGAAAACTTATACAGGAAAGAGACTGAGGGAGAAGAAGATTTTTTGTATGATGGTGTAGCTGCCAACCTGTCTTGGTCATCTAAGGAGGCCGAGTACAGGAACCGACGGTCATCAACAGATGAGGATCCTCTAGCTGAATCTATCCTCAACCTCCAGTCTCTGCAGCAAGCACTTGAAAAAGAAGTTGAGAAATTAGGGGAGATTGGGAAGGATGTAGGGTCAACTGATAGCTCGATCAATGGTGGTAATGAAGCTTCAAGTTATACTGACCCAGAAATTTGTGAAAGAATTTCATACGAGCAGCTGGGCTCTGGTAAGATTAGACAGACTGCTTCAGGTTTGTTGAAAGCACAGGTGTTAAGCTTCACAGAGAAGGTGAAAATTTTGGAAAGTAAGCTGGAGAAAACTAATGCTTTGCTCGATGTGAAAGAGTCCAGAGTTGCTGAATTGGAAGCAACTATTAGGCATAGTAAGTCAGCAATGGAAGAATCTGTTAGGACCATGGATTTGGAAGGTGAAAGGATTAAAGAGATGGAGAGTTATATTGAGGGGGTCTTTCAGGAAAAAATCGAAGTGGAGGTTGAGTATTTGGCACTCAGAAGGGCAATTGAGAGGTTGAAGGGGGAAAACAGAGATGACCAAGTTACTACACTCATTGAAGAGCAGAAAACGCTTGCCGGGGAGCAGGCAGAGATGATGAAGGCTCTTGGAGAAGCAGAAAGCAAGGCTGCAAAGCTTAAGAAGCGGGCCAAGGAGGTAGAAAAATATTGCGGTGATCTAATAGGGAATGATGAGGTATTGAAGATGCAGAAGAGAGTATGTAGGGCTAGCTCAGGTTTTGTTATACAGTTGATACTATTGGTCTTAGCGTTTTGGGTGTATCTCTCACAACTGTCGCCCGGCTCTGGGATACCTGTTCCCACGTAA 1836 44.17 MDLESKCSALESVEDNDLTTQSAPPEDDNEVMTNGSSIDTPGSAGNVLDTSNTTTLPTDTREIVLDREQNETSPTLAVKSPSSESPTTKGRGLRKWRRIKRDFIEDKSAPVDISKALKRGFSTSSIQNKPQHLMKQSSEGSLRPVLPVDGMVFHGSSSNSNSRHAVNPAFAPNANSENSEDVSSRSSTAASAPKMRYEPSSGRVWEKNRVKSVNAKNSGNFSPRVQQQKDQIEGSKKARGEKIKIEKENSHSSLESDSISSNYVFMLGAYNATSNGKQSGRSMNYDGESEEAHASAQKFGEGVENLYRKETEGEEDFLYDGVAANLSWSSKEAEYRNRRSSTDEDPLAESILNLQSLQQALEKEVEKLGEIGKDVGSTDSSINGGNEASSYTDPEICERISYEQLGSGKIRQTASGLLKAQVLSFTEKVKILESKLEKTNALLDVKESRVAELEATIRHSKSAMEESVRTMDLEGERIKEMESYIEGVFQEKIEVEVEYLALRRAIERLKGENRDDQVTTLIEEQKTLAGEQAEMMKALGEAESKAAKLKKRAKEVEKYCGDLIGNDEVLKMQKRVCRASSGFVIQLILLVLAFWVYLSQLSPGSGIPVPT 611
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 10155693 10157709 - Conep15aG0132800.1 Cone15ag1299 454427

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cone15ag1299 611 Coils Coil 532 559 - -
Cone15ag1299 611 MobiDBLite consensus disorder prediction 211 229 - -
Cone15ag1299 611 MobiDBLite consensus disorder prediction 69 89 - -
Cone15ag1299 611 MobiDBLite consensus disorder prediction 153 256 - -
Cone15ag1299 611 MobiDBLite consensus disorder prediction 153 194 - -
Cone15ag1299 611 PANTHER WPP DOMAIN-INTERACTING PROTEIN 2 56 611 IPR044696 -
Cone15ag1299 611 Coils Coil 492 512 - -
Cone15ag1299 611 Coils Coil 429 456 - -
Cone15ag1299 611 MobiDBLite consensus disorder prediction 275 296 - -
Cone15ag1299 611 MobiDBLite consensus disorder prediction 230 253 - -
Cone15ag1299 611 MobiDBLite consensus disorder prediction 12 60 - -
Cone15ag1299 611 Coils Coil 347 367 - -
Cone15ag1299 611 MobiDBLite consensus disorder prediction 1 94 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone15ag1299 K27869 - - cit:102621860 494.967
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone14ag1273 Cone-Chr14:10181416 Cone15ag1299 Cone-Chr15:10155693 3.20E-295 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi19g787 Blo03g00479 Blo03g01494 Bda07g00438 Bda09g00453 . Bpe08g01074 . . . . . . . . . . . . . . . . . . . . . . . . . . . Cone14ag1273 Cone15ag1299 . Csa03g00380 . . . . . . Bpe11g00614 . Bma07g01232 Bma14g00656 . . . . Cma16g00998 . Car16g00955 Cpe14g00821 . . . . . . . . . . . . . . . . . Chy06g01934 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0004840 2 1 2 3 2 1 2 1 1 1 2 1 2 1 1 2 1 2 2 1 1 1 1 1 1 1 0 2 1 1 41