Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone15ag1303 | ATGACAGGGACCAATGAAAATATGGCTGCTGCTGGAGATTGGTTGCCACCTGATCATAGCTCAAGAGGTTTTTTCACGGCATCCTTAGATGAAGATGTTGGCTTGGAATGCACCATGAAAACTGTCAGTCATAGAACTGAGGAACTCTTTCTAGGACCGAAGGAGCAGAAATCAAACTCTCAGGGGGGACTTGTGGAGAGGATAGCAGCTAGAGCTGGATTCAATGCCCCAAGATTGAACACTGAAGGCATTAGATCAGTTGACCTCTCACTGAATTCTGATGTTAGGTCCCCTTACTTGACCATACCAACCGGCCTTAGTCCAACTACACTGCTTGATTCTCCCGTTTTCCTTTCTAATTCACTGCATGCTCAGCCATCTCCAACAACAGGAAAGTTTATTTGTACCAGCAGGAACTCCATGTGGATGTCAGAGTCGATTGATAAAGGTAGATTTAGTCTCCTTGATGATTCCAATACCTCGTCATTTGCTTTCAAGTCTGGAGGGGAATCGGGCTCTCCTTTCCTTTTCGGTGCATTATGCAAAATGGCTCCATCTTTACTTCATCTGCAATCTTTTCCTACGATTGAGGGTTTGATACTGTCAGAAAATTCCATTCAATCTCATAGTGCAGAACCATGCAATGCATCAACTCAAGATAGAAATGGTGTTCATCCATGTGCAGATTTCTCCCAGTCATGCACAGAAAATGACATCCGAGTTAATAATATAGCAGGAGATCAGAGACCTATAGAAAATTCTCCATCACTAGATGAGCAAGCAGATGAAGAAGGAGAGCAGAGAGGCAGTGGAGATTCTGTGATTTCTGGCTCTTGTGGGGCCCCATCCAAGGATGGATATAATTGGAGAAAATACGGACAAAAACAAGTAAAAGGCAGTGAGTTTCCACGAAGTTACTACAAGTGCACTCATCCAAACTGTCAGGTCAAAAAGAAGGTAGAACGGTCTATTGAGGGCCTTATAACAGAGATCATCTATAAAGGGGCCCATAACCATCCTAAGCCTCCTTCAAGTCGCCGATCAGCCATTGGTTCATCTAACCATCAAGCTGACATGCAACTAGAGATGCTTGAGCAAGGTGGGTCACAAAATGTTGAAGATGATGATCCAACCTGGGCAAGGGCAAGCATTCAAAAAGGGAACCTTGCAGGAGCCCCTGATTGCACGCATGACGGCATTGAGGTGACATCATTGGCAGCTGTTGGTGGTAATGAATTAGGAGATGCCGTTGATGACTCATCCACATTTTCTAATGATGCTGATGCTGATGATGAAGAAGAAGAAGATGGGGTTACCCATGCTAGTGTATCCTTAGGTTTCGTAGGTGAGGGGGATGAATCTGAGTCGAAAAGAAGGAAAGTTGAAGCCTATGCTACAGAAATGAGTGGGGCCACAAGAGCGATAAGGGAACCTAGAGTTGTGGTCCAGACGACAAGTGCAGTAGATATACTTGATGATTCCTATCGCTGGCGGAAATATGGACAGAAAGTGGTTAAAGGAAACCCAAATCCTAGGAGCTACTACAAGTGCACAAATGCCGGTTGCACAGTGAGGAAGCATGTTGAGAGGGCATCACATGACCTCAAATCAGTAATCACGACCTATGAAGGAAAGCACAACCATGACGTTCCTGTCGCTCGTAACAGCAGCCACTCCAACTCTGGCATGCTGGGTTCTGTACCTGCTCAAAGGCCTCATCTCCGGCCACCTGAGATGTCCCAGATGCACAACGGCAAGCCAAGATTTGAAAGGCATGCTGCTGCAGTCGCTCCGTTTGGAAGGCACCAGGTGGGTCCTACTCCTTCCCATGGCTTCTCTTTTGTAATGGCTCAACCAGGCCTTGCAAATCTGGCAATGGTACAACCCAGGCTTCCTCCTGGTCTGCCCATTCATCCATATTTGGTGCCACATCATCACCAGACTAATGAAATGGGCTTTTTGTTACCAAAAGGAGAAGCCAAGTTAGAGCCATCGTCCGATCCTGGTCTGAACCTATACAATGGTTCATCCATATATCAGAATATAATGAGTAGGCTTCCACTTGGACCTTAG | 2073 | 45.88 | MTGTNENMAAAGDWLPPDHSSRGFFTASLDEDVGLECTMKTVSHRTEELFLGPKEQKSNSQGGLVERIAARAGFNAPRLNTEGIRSVDLSLNSDVRSPYLTIPTGLSPTTLLDSPVFLSNSLHAQPSPTTGKFICTSRNSMWMSESIDKGRFSLLDDSNTSSFAFKSGGESGSPFLFGALCKMAPSLLHLQSFPTIEGLILSENSIQSHSAEPCNASTQDRNGVHPCADFSQSCTENDIRVNNIAGDQRPIENSPSLDEQADEEGEQRGSGDSVISGSCGAPSKDGYNWRKYGQKQVKGSEFPRSYYKCTHPNCQVKKKVERSIEGLITEIIYKGAHNHPKPPSSRRSAIGSSNHQADMQLEMLEQGGSQNVEDDDPTWARASIQKGNLAGAPDCTHDGIEVTSLAAVGGNELGDAVDDSSTFSNDADADDEEEEDGVTHASVSLGFVGEGDESESKRRKVEAYATEMSGATRAIREPRVVVQTTSAVDILDDSYRWRKYGQKVVKGNPNPRSYYKCTNAGCTVRKHVERASHDLKSVITTYEGKHNHDVPVARNSSHSNSGMLGSVPAQRPHLRPPEMSQMHNGKPRFERHAAAVAPFGRHQVGPTPSHGFSFVMAQPGLANLAMVQPRLPPGLPIHPYLVPHHHQTNEMGFLLPKGEAKLEPSSDPGLNLYNGSSIYQNIMSRLPLGP | 690 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
15 | 10178582 | 10182177 | - | Conep15aG0133200.1 | Cone15ag1303 | 454431 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone15ag1303 | 690 | ProSiteProfiles | WRKY domain profile. | 285 | 342 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone15ag1303 | 690 | FunFam | WRKY transcription factor | 273 | 343 | - | - | |
Cone15ag1303 | 690 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 221 | 574 | IPR044810 | GO:0003700(InterPro) | |
Cone15ag1303 | 690 | Gene3D | WRKY domain | 478 | 544 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone15ag1303 | 690 | Gene3D | WRKY domain | 272 | 343 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone15ag1303 | 690 | FunFam | WRKY transcription factor 33 | 478 | 544 | - | - | |
Cone15ag1303 | 690 | SUPERFAMILY | WRKY DNA-binding domain | 483 | 551 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone15ag1303 | 690 | MobiDBLite | consensus disorder prediction | 411 | 459 | - | - | |
Cone15ag1303 | 690 | SUPERFAMILY | WRKY DNA-binding domain | 282 | 342 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone15ag1303 | 690 | MobiDBLite | consensus disorder prediction | 246 | 282 | - | - | |
Cone15ag1303 | 690 | Pfam | WRKY DNA -binding domain | 492 | 549 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone15ag1303 | 690 | Pfam | WRKY DNA -binding domain | 284 | 340 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone15ag1303 | 690 | ProSiteProfiles | WRKY domain profile. | 486 | 551 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone15ag1303 | 690 | MobiDBLite | consensus disorder prediction | 334 | 353 | - | - | |
Cone15ag1303 | 690 | SMART | WRKY_cls | 283 | 341 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone15ag1303 | 690 | SMART | WRKY_cls | 491 | 550 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone15ag1303 | Cone-Chr15:10178582 | Cone3ag0629 | Cone-Chr3:3107909 | 5.64E-103 | dispersed | |
Cone14ag1277 | Cone-Chr14:10214634 | Cone15ag1303 | Cone-Chr15:10178582 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
44913 | PF00076 | RRM_1 | 2.00E-12 | CL0221 | Cone | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone15ag1303 | K18835 | - | vvi:100261730 | 792.727 |