Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone15ag1304 | ATGGAGGGAGTACGGAGAGCAGAACAGCTTCAGCTTGGTATCTTTTTCTTGTGCTTGTGCTTGGCGTTGAAGCAGCTTTGTTTCACCAACGCAGCCTCCGGTAGTGCTGAAGACATACGGATGTTGATGACTTTCAAGCGCTCCTCCGTCAGGTCCGATCCAAATGGTTTCTTGGTCGACTGGACGGAGAATGCCCCCACTGCCTGTTCATGGCGTGCCGTTTCCTGCTCTCCTGACGGCCGTGTTACTATCCTCAACCTCACTAATGCAGGCCTCACTGGGCCCCTTCATCTCCCCTACCTCACTGCCCTTCCATCTCTCAACCATCTCTTCTTGCGCGCCAATTCTTTCTCTTCTGGGGATCTCACTGCCTCCTCCAACACCACCACTTCGTGTCCCCTCCAGACTCTCGACCTCTCCTCCAACAACTTTTCGGTCCCTCTTCAGGCAACATCTTTTCTCCTCTCCTGCTCTCGTCTTGTCTCTCTCAATCTCTCCCGCAATCTCATCGCGGGAAAACTGGGTTCCACTCTCCTCCTGCCTTTCAAAGCCCTGTCCACACTCGACCTCTCCCACAACATGCTGTCTGGTGAGATACCGCCCCGTTTTGTGGCAGACTCTCCTGCATCCCTCAAGTATCTGGATCTCTCCTATAACAACTTCTCCGGCAACTTCTCCGCCCTTAATTTCGGGCCCTGCACCAATCTCACTACGCTCAGGCTAAGTCACAACAACCTTGCAGGGCCTGGATTTCCATTGAGCTTAGCCAATTGCCTGCTCTTGGAGACACTGGACTTCTCCCACAATCAGCTGCAGCACATAATTCCAGGTTCCTTGCTGGGAAATTTCAACAAGTTGACGCAGCTGTATCTAGACCATAATCAGTTTTCTGGGGAGATCCCACCCGACTTGGGACGGCCTTGTGGAACACTGCAAGAGCTTGATCTATCTGCCAATAAACTCTCCGGTGGGTTGCCTCCCACTTTTGCCTCATGCTCTTCTCTAGTTTCTCTCAACCTTAGCAACAATCAGCTCTCCGGTGACTTTCTCAGTGCGGTTGTCAGTAATCTCCAAAGCCTGAAATATCTGTACCTGCCATTCAACAACATAAGTGGCGTGATTCCTGTGTCTCTCACCAATTGTACTCAGCTTCAAGTGCTGGACCTCAGTTCTAATGCTTTCACAGGGAACATTCCTCCCGGTTTCTGTACCTCCCCGGTTAGCTCCGCCCTTGAAAGGATTCTTCTTGCAAACAACTTTCTCTCTGGGACAGTGCCATATGAGCTCGGAAACTGCAGCAACCTCAAAACAATTGACCTTAGCTTCAACAGCCTCACTGGCCCCATTCCCCCACAAATTTGGACGTTGCCGAATCTCTCGGACCTTGTCATGTGGGCAAACAACCTAACGGGAGAAATTCCACAAGGCATATGCATTACTGGAGGCAACCTAGAGATGTTGATCCTCAACAACAACTGCATTACCGGAATCATTCCACAATCCATTGCCAGCTGCACCAATATGATATGGATCTCACTTTCTAGCAACCGGCTTACTGGACAAGTGCCCGCGGGTATAGGAAATCTCCTCAACCTTGCTATCCTTCAATTAGGGGACAATTCGCTTACTGGACTGATCCCACCCGAGCTTGGTAACTGTCGGAACCTCATTTGGCTTGATTTGAATAGCAATGAACTAAATGGTGCTATCCCACCCGAGCTTGCTGACCAAGCTGGCACGATACTCCCCGGAAGTATTTCTGGGAAACAGTTTGCATTTGTCAGGAATGAGGGTGGTACGGCTTGCAGGGGTGCTGGAGGGCTCGTTGAGTTTGAAGGAATCAGGGCGGAGAGGTTGGAAGGGTTTCCTATGGTTCATTCTTGCCCAGCCACAAGAATCTACTCTGGCCTTACTATGTATACCTTTGCTAGCCATGGGAGCATGATATACCTTGATCTCGCTTACAATGCCTTGTCAGGAACTATTCCTGAAAATTTTGGTACGATGAACTATCTACAAGTCTTGAATTTAGGACACAACAGATTATATGGACAGATTCCAGACGGTCTTGGCAATTTAAAAGCAATTGGAGTTCTGGACCTCTCTCATAATAATCTCCAAGGATTCATCCCGGGATCATTAGGGTCTCTATCTTTTCTCAGCGACCTTGATGTGTCAAACAACAACCTCTCCGGCCCCATCCCCACTGGAGGTCAGTTGATGACTTTTCCGGCATCAAGATATGAGAATAATTCTGGACTTTGTGGAGTACCCTTGCCTCTTTGTGGCTCTGGAAGCCACCCGACTACTTTCCACTCCCAGGATCAAAGAAAGCAGTCTACTGAGATTGGCATGGTCATAGGTATCACATTCTTCTTCTTGTGTATCCTTGGACTTTTATTAGCCCTTTATCGCGTGAACAAGTATCATAAAAGGGAGGAAAAAAGAGACAAGTGCATTGAAAGCCTCCCAACTTCAGGGAGCAGCGGCTGGAAACTTTCAAGTGCTCCCGAGCCTCTGAGCATCAATATTGCCACATTTGAGAAACCTCTGCGAAAGCTCACTTTTGCCCATCTACTCGAGGCCACAAATGGTTTCAGCTCGGAGAGCTTGATAGGGTCAGGAGGATTTGGTGAGGTTTACAAGGCACAACTCAAGGATGGCTGCACTGTCGCTATCAAGAAGCTTATCCACGTCACGGGGCAAGGTGATAGGGAGTTTATGGCAGAAATGGAGACTATTGGGAAAATTAAGCACCGAAACCTGGTTCCACTGCTAGGGTACTGTAAAATTGGCGAGGAGAGGCTTCTTGTGTATGAGTACATGAAGTGGGGCAGTTTAGAGGCTGTTCTTCATGACAGAGACAAGTGCGACGGTTCAAACACAAAGCTGAGCTGGGCAGTGAGAAAGAAAATAGCTCTTGGTTCGGCAAGGGGTCTAGCTTTCCTTCATCATAGCTGTATTCCTCACATTATACACAGAGACATGAAGTCTAGTAATGTCCTTTTGGATGAGAATTTGGAGGCAAGAGTTTCTGATTTTGGGATGGCAAGACTGGTAAATGCCCTTGACACCCATCTTAGTGTGAGCACTCTTGCCGGAACTCCGGGATATGTTCCGCCTGAGTACTATCAAAGCTTTAGGTGCACGACAAAAGGGGATGTCTATAGTTATGGAGTCATATTGCTAGAGCTTTTATCTGGTAAGAGGCCTATAGACCCTTCACAATTTGGTGATGACAACAATCTCGTTGGATGGGCAAAGCAGCTGCAGAGAGAGAAGAGAACGAATGAGATACTGGACCCCAAGTTGTTGGCACAGGACACAGAAGAGGATGAATTGTACGAGTGTCTGAGCATTGCCTTTGAATGCCTGGAAGACAGGCCTTTCCGTAGACCAACCATGGTTCAGGTAATGGCAATGTTTAAAGAGCTTCAGGTCAATACAGACGATGGCCTTGATGGTTTCTGGCAGAAAGACTCTACTGTGATGGAGGAGCCATGA | 3504 | 48.43 | MEGVRRAEQLQLGIFFLCLCLALKQLCFTNAASGSAEDIRMLMTFKRSSVRSDPNGFLVDWTENAPTACSWRAVSCSPDGRVTILNLTNAGLTGPLHLPYLTALPSLNHLFLRANSFSSGDLTASSNTTTSCPLQTLDLSSNNFSVPLQATSFLLSCSRLVSLNLSRNLIAGKLGSTLLLPFKALSTLDLSHNMLSGEIPPRFVADSPASLKYLDLSYNNFSGNFSALNFGPCTNLTTLRLSHNNLAGPGFPLSLANCLLLETLDFSHNQLQHIIPGSLLGNFNKLTQLYLDHNQFSGEIPPDLGRPCGTLQELDLSANKLSGGLPPTFASCSSLVSLNLSNNQLSGDFLSAVVSNLQSLKYLYLPFNNISGVIPVSLTNCTQLQVLDLSSNAFTGNIPPGFCTSPVSSALERILLANNFLSGTVPYELGNCSNLKTIDLSFNSLTGPIPPQIWTLPNLSDLVMWANNLTGEIPQGICITGGNLEMLILNNNCITGIIPQSIASCTNMIWISLSSNRLTGQVPAGIGNLLNLAILQLGDNSLTGLIPPELGNCRNLIWLDLNSNELNGAIPPELADQAGTILPGSISGKQFAFVRNEGGTACRGAGGLVEFEGIRAERLEGFPMVHSCPATRIYSGLTMYTFASHGSMIYLDLAYNALSGTIPENFGTMNYLQVLNLGHNRLYGQIPDGLGNLKAIGVLDLSHNNLQGFIPGSLGSLSFLSDLDVSNNNLSGPIPTGGQLMTFPASRYENNSGLCGVPLPLCGSGSHPTTFHSQDQRKQSTEIGMVIGITFFFLCILGLLLALYRVNKYHKREEKRDKCIESLPTSGSSGWKLSSAPEPLSINIATFEKPLRKLTFAHLLEATNGFSSESLIGSGGFGEVYKAQLKDGCTVAIKKLIHVTGQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYMKWGSLEAVLHDRDKCDGSNTKLSWAVRKKIALGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENLEARVSDFGMARLVNALDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDPSQFGDDNNLVGWAKQLQREKRTNEILDPKLLAQDTEEDELYECLSIAFECLEDRPFRRPTMVQVMAMFKELQVNTDDGLDGFWQKDSTVMEEP | 1167 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 15 | 10182636 | 10186718 | - | Conep15aG0133300.1 | Cone15ag1304 | 454432 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone15ag1304 | 1167 | ProSitePatterns | Protein kinases ATP-binding region signature. | 872 | 895 | IPR017441 | GO:0005524(InterPro) | |
| Cone15ag1304 | 1167 | SUPERFAMILY | L domain-like | 374 | 748 | - | - | |
| Cone15ag1304 | 1167 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 991 | 1003 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
| Cone15ag1304 | 1167 | SUPERFAMILY | Protein kinase-like (PK-like) | 847 | 1142 | IPR011009 | - | |
| Cone15ag1304 | 1167 | Pfam | Brassinosteroid receptor island domain | 579 | 642 | IPR045381 | - | |
| Cone15ag1304 | 1167 | FunFam | LRR receptor-like serine/threonine-protein kinase GSO1 | 211 | 406 | - | - | |
| Cone15ag1304 | 1167 | SMART | serkin_6 | 866 | 1142 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
| Cone15ag1304 | 1167 | SMART | LRR_typ_2 | 357 | 380 | IPR003591 | - | |
| Cone15ag1304 | 1167 | SMART | LRR_typ_2 | 482 | 504 | IPR003591 | - | |
| Cone15ag1304 | 1167 | SMART | LRR_typ_2 | 693 | 716 | IPR003591 | - | |
| Cone15ag1304 | 1167 | SMART | LRR_typ_2 | 381 | 405 | IPR003591 | - | |
| Cone15ag1304 | 1167 | SMART | LRR_typ_2 | 669 | 692 | IPR003591 | - | |
| Cone15ag1304 | 1167 | SMART | LRR_typ_2 | 261 | 281 | IPR003591 | - | |
| Cone15ag1304 | 1167 | SMART | LRR_typ_2 | 283 | 307 | IPR003591 | - | |
| Cone15ag1304 | 1167 | SMART | LRR_typ_2 | 104 | 127 | IPR003591 | - | |
| Cone15ag1304 | 1167 | SMART | LRR_typ_2 | 432 | 456 | IPR003591 | - | |
| Cone15ag1304 | 1167 | SMART | LRR_typ_2 | 529 | 553 | IPR003591 | - | |
| Cone15ag1304 | 1167 | SMART | LRR_typ_2 | 182 | 206 | IPR003591 | - | |
| Cone15ag1304 | 1167 | FunFam | LRR receptor-like serine/threonine-protein kinase ERECTA | 641 | 761 | - | - | |
| Cone15ag1304 | 1167 | FunFam | Brassinosteroid LRR receptor kinase | 942 | 1147 | - | - | |
| Cone15ag1304 | 1167 | ProSiteProfiles | Leucine-rich repeat profile. | 260 | 281 | IPR001611 | GO:0005515(InterPro) | |
| Cone15ag1304 | 1167 | Pfam | Leucine rich repeat | 457 | 518 | IPR001611 | GO:0005515(InterPro) | |
| Cone15ag1304 | 1167 | SUPERFAMILY | L domain-like | 153 | 403 | - | - | |
| Cone15ag1304 | 1167 | FunFam | LRR receptor-like serine/threonine-protein kinase GSO1 | 407 | 580 | - | - | |
| Cone15ag1304 | 1167 | Pfam | Protein kinase domain | 867 | 1140 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
| Cone15ag1304 | 1167 | Pfam | Leucine Rich repeat | 233 | 250 | IPR001611 | GO:0005515(InterPro) | |
| Cone15ag1304 | 1167 | FunFam | serine/threonine-protein kinase BRI1-like 2 | 827 | 941 | - | - | |
| Cone15ag1304 | 1167 | Pfam | Leucine Rich Repeat | 531 | 553 | IPR001611 | GO:0005515(InterPro) | |
| Cone15ag1304 | 1167 | Pfam | Leucine Rich Repeat | 334 | 352 | IPR001611 | GO:0005515(InterPro) | |
| Cone15ag1304 | 1167 | Pfam | Leucine Rich Repeat | 285 | 305 | IPR001611 | GO:0005515(InterPro) | |
| Cone15ag1304 | 1167 | Pfam | Leucine Rich Repeat | 672 | 693 | IPR001611 | GO:0005515(InterPro) | |
| Cone15ag1304 | 1167 | Pfam | Leucine Rich Repeat | 311 | 332 | IPR001611 | GO:0005515(InterPro) | |
| Cone15ag1304 | 1167 | Pfam | Leucine Rich Repeat | 359 | 381 | IPR001611 | GO:0005515(InterPro) | |
| Cone15ag1304 | 1167 | Pfam | Leucine Rich Repeat | 261 | 279 | IPR001611 | GO:0005515(InterPro) | |
| Cone15ag1304 | 1167 | Pfam | Leucine Rich Repeat | 185 | 203 | IPR001611 | GO:0005515(InterPro) | |
| Cone15ag1304 | 1167 | Pfam | Leucine Rich Repeat | 649 | 669 | IPR001611 | GO:0005515(InterPro) | |
| Cone15ag1304 | 1167 | Pfam | Leucine Rich Repeat | 434 | 456 | IPR001611 | GO:0005515(InterPro) | |
| Cone15ag1304 | 1167 | Pfam | Leucine Rich Repeat | 383 | 403 | IPR001611 | GO:0005515(InterPro) | |
| Cone15ag1304 | 1167 | Pfam | Leucine Rich Repeat | 698 | 717 | IPR001611 | GO:0005515(InterPro) | |
| Cone15ag1304 | 1167 | Pfam | Leucine Rich Repeat | 555 | 575 | IPR001611 | GO:0005515(InterPro) | |
| Cone15ag1304 | 1167 | Pfam | Leucine Rich Repeat | 210 | 225 | IPR001611 | GO:0005515(InterPro) | |
| Cone15ag1304 | 1167 | Gene3D | - | 586 | 643 | - | - | |
| Cone15ag1304 | 1167 | FunFam | Serine/threonine-protein kinase BRI1-like 1 | 586 | 643 | - | - | |
| Cone15ag1304 | 1167 | Gene3D | Phosphorylase Kinase; domain 1 | 831 | 941 | - | - | |
| Cone15ag1304 | 1167 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 | 414 | 1144 | IPR051564 | GO:0016020(PANTHER) | |
| Cone15ag1304 | 1167 | Pfam | Leucine rich repeat N-terminal domain | 36 | 77 | IPR013210 | - | |
| Cone15ag1304 | 1167 | ProSiteProfiles | Protein kinase domain profile. | 866 | 1145 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
| Cone15ag1304 | 1167 | SUPERFAMILY | L domain-like | 82 | 172 | - | - | |
| Cone15ag1304 | 1167 | Gene3D | Transferase(Phosphotransferase) domain 1 | 942 | 1157 | - | - | |
| Cone15ag1304 | 1167 | Gene3D | Ribonuclease Inhibitor | 85 | 763 | IPR032675 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone13ag0190 | Cone-Chr13:1182897 | Cone15ag1304 | Cone-Chr15:10182636 | 3.55E-59 | dispersed | |
| Cone15ag1304 | Cone-Chr15:10182636 | Cone6ag1315 | Cone-Chr6:10561015 | 6.27E-195 | dispersed | |
| Cone19ag0183 | Cone-Chr19:1158498 | Cone15ag1304 | Cone-Chr15:10182636 | 1.52E-56 | dispersed | |
| Cone20ag0097 | Cone-Chr20:440664 | Cone15ag1304 | Cone-Chr15:10182636 | 1.20E-56 | dispersed | |
| Cone14ag1278 | Cone-Chr14:10219443 | Cone15ag1304 | Cone-Chr15:10182636 | 0 | wgd |
Transcription factors information
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| 82184 | PF14901 | Jiv90 | 3.50E-36 | No_clan | Cone | PK |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone15ag1304 | - | - | - | 0.0 |