Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone16ag0020 | ATGTTTATCGCTCTTATCATCTTTTCCTCTCTCTCTCTTTTCCTCCTCTCTTTTCTCTTCTCCCTCGTAAGAGAATTGCTCACCACCACTCCTCCTACTCCCAAATTACCACCTTCCTTCACCACTACTCCTGGCCCTACTTCCTACCCCTTCATAGGTTGCCTAATCTCCTTCTACCAAAATCGGCACCGCCTACTATCATGGTACACTGATCTACTCGCAGACTCACCATCCCAGACCATCACAGTGAATCGGTTAGGAGCCAGGCGCACCATAGTCACTGCCAACCCGACCAATGTCGAATACATCCTCAAAACCAACTTCAACAACTTCCCGAAAGGCAAACCCTTCACCGATATCCTCGGCGATCTTCTAGGTTGCGGGATTTTCAACGTGGACGGTCAACTTTGGTCGGCGCAACGCAAACTAGCTAGCCATGAGTTCACCACAAGAACCCTAAGACAATTTGTGCTCACAACACTTGAAAAAGAAGTTTCTACTCGTCTGATCCCATTGCTTGAAAATGCTTGTGAGACTAAAGAAATTGTTGATTTGCAAGATTTGTTCAAGAGATTTGCTTTTGATGTGATATGTAAAGTCTCATTAGGCAGAGACCCGAAATGTTTGGACCCATTGATCGATGAGCTGTCCGAGATTAATGATCCCCTTGTTAAAGCTTTTGATTCTGCTTCAGCGATTAGTGCTATGAGATCAATGGCTCCCATTTTTCTTGCATGGAAAATTAAGAGGTTTTTGAATATCGGGTCCGAAAAGAAACTCAAAGAAGCTGTAGCATTAATCCATGGTTCGGTAGTGAAGATAGTGAGGAACAAAAGGTTATCATACAATGATCATCATAAATCATATGATGATGTTGATGAGCAAGATCATGATTTTTTGTCAAGATTGATAGCAGCTGGTCATGATGAAGAAGTTGTTAGAGATATGGTGATAAGTTTTGTAATGGCGGGAAGAGATACCACTTCATCTGCCCTAACTTGGCTCTTTTGGCTTCTTGCCAAGAATCCAAACGTAGAGAAGATGATTGCCAATGAAGTAAATAATTCTATGCATGATCATGAAGGGTCATTAAATTTAGGCTATGAAGAGTTGAGGGGGATGAATTATTTGAAGGCTTGTTTATGTGAATCAATGCGGCTTTACCCGCCTGTCGTATGGGACTCAAAACATGCGGATTCAGACGATATTTTGCCGGATGGGACCCCCGTCAAGAGAGGGGATAGGGTGACATATTTTCCTTATGGTATGGGGAGGATGCAAGGGATATGGGGAAAGGATTGCCCCGAGTTCAGACCGGACCGGTGGTTTGATGGGCCCGTTGAGGACAGGGTGATGAAGTTGGTTAGTCCTTTTGAGTTTCCAGTTTTTCAAGCCGGTCCGAGGGTTTGTCTAGGGAAGGAGATGGCTTTTATTCAGATGAAGTATGTAGTGGCCAAAGTGTTGCGCCGGTTTGAGATGAGGTTGGTTGATAGTGAGGTTGAACCGGTTTTTGTTCCATTGTTGACGGCTCACATGGCGGGTGGATTGAAGGTAATGGTACGGAAAAGGAGGGACAATTATACAGCGTAG | 1590 | 44.21 | MFIALIIFSSLSLFLLSFLFSLVRELLTTTPPTPKLPPSFTTTPGPTSYPFIGCLISFYQNRHRLLSWYTDLLADSPSQTITVNRLGARRTIVTANPTNVEYILKTNFNNFPKGKPFTDILGDLLGCGIFNVDGQLWSAQRKLASHEFTTRTLRQFVLTTLEKEVSTRLIPLLENACETKEIVDLQDLFKRFAFDVICKVSLGRDPKCLDPLIDELSEINDPLVKAFDSASAISAMRSMAPIFLAWKIKRFLNIGSEKKLKEAVALIHGSVVKIVRNKRLSYNDHHKSYDDVDEQDHDFLSRLIAAGHDEEVVRDMVISFVMAGRDTTSSALTWLFWLLAKNPNVEKMIANEVNNSMHDHEGSLNLGYEELRGMNYLKACLCESMRLYPPVVWDSKHADSDDILPDGTPVKRGDRVTYFPYGMGRMQGIWGKDCPEFRPDRWFDGPVEDRVMKLVSPFEFPVFQAGPRVCLGKEMAFIQMKYVVAKVLRRFEMRLVDSEVEPVFVPLLTAHMAGGLKVMVRKRRDNYTA | 529 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 16 | 148165 | 149754 | + | Conep16aG0002000.1 | Cone16ag0020 | 454454 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone16ag0020 | 529 | PRINTS | E-class P450 group IV signature | 314 | 340 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone16ag0020 | 529 | PRINTS | E-class P450 group IV signature | 470 | 488 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone16ag0020 | 529 | PRINTS | E-class P450 group IV signature | 374 | 390 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone16ag0020 | 529 | PRINTS | E-class P450 group IV signature | 408 | 422 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone16ag0020 | 529 | Pfam | Cytochrome P450 | 44 | 502 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone16ag0020 | 529 | FunFam | Cytochrome P450 | 39 | 526 | - | - | |
| Cone16ag0020 | 529 | PANTHER | CYTOCHROME P450 | 19 | 516 | - | - | |
| Cone16ag0020 | 529 | CDD | CYP86A | 79 | 516 | - | - | |
| Cone16ag0020 | 529 | PRINTS | P450 superfamily signature | 461 | 470 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone16ag0020 | 529 | PRINTS | P450 superfamily signature | 379 | 390 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone16ag0020 | 529 | PRINTS | P450 superfamily signature | 323 | 340 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone16ag0020 | 529 | PRINTS | P450 superfamily signature | 470 | 481 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone16ag0020 | 529 | SUPERFAMILY | Cytochrome P450 | 42 | 523 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone16ag0020 | 529 | Gene3D | Cytochrome P450 | 40 | 528 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone11ag0055 | Cone-Chr11:242010 | Cone16ag0020 | Cone-Chr16:148165 | 1.49E-59 | dispersed | |
| Cone11ag1370 | Cone-Chr11:9950948 | Cone16ag0020 | Cone-Chr16:148165 | 1.95E-139 | dispersed | |
| Cone13ag0642 | Cone-Chr13:6450339 | Cone16ag0020 | Cone-Chr16:148165 | 2.74E-139 | dispersed | |
| Cone13ag1195 | Cone-Chr13:9264743 | Cone16ag0020 | Cone-Chr16:148165 | 3.88E-136 | dispersed | |
| Cone16ag0020 | Cone-Chr16:148165 | Cone18ag1427 | Cone-Chr18:9653458 | 1.15E-207 | dispersed | |
| Cone16ag0020 | Cone-Chr16:148165 | Cone2ag0970 | Cone-Chr2:35224812 | 0 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone16ag0020 | K20665 | - | rcu:8269245 | 646.351 |