Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone16ag0070 ATGCAGCAGGATTTGTCGTCGGAGCAGGAATCGGACGATCCTGATTCCGAGTTTGTTGAGGTTGATCCCACTGGTCGATATGGACGGTACAAGGAGATTCTGGGAAAAGGTGCTTTTAAAAAAGTATATAGGGCTTTTGATGAATTGGAAGGAATTGAAGTAGCTTGGAATCAGGTTAAGGTGGTGGATTTATTGCAGCATTCCGAGGATCTGGAACGTCTATATTCCGAAGTTCATTTACTCAAGACTTTGAAGCACAAGAACATTATTAAGCTTTACAATTCATGGGTCGACACTAAAAAAGAAAACATAAACTTCATCACAGAGATATTTACTTCTGGAACACTGCGCCAATATAGGAAGAAACATAAGCATGTTGATTTGAGAGCATTGAAGAAATGGTCTAGACAGATTTTGGAGGGCCTTTTCTATCTTCATAGCCATGATCCGCCTGTGATTCATCGAGACTTAAAGTGCGACAACATATTTGTCAATGGAAACCAAGGGGAGGTGAAGATTGGAGATTTAGGACTAGCTGCCATTCTTCGGCAAGCCCGGTCAGCTCACAGTGTAATAGGTACCCCAGAATTTATGGCTCCAGAGCTGTATGAAGAGGAATACAATGAGCTGGTAGACATTTATGCATTTGGCATGTGCTTAATAGAGCTGGTGACCGTTGAATATCCCTACGTTGAATGTGCTAATGCTGCTCAAATATACAAGAAAGTGACATCGGGGATAAAGCCAGCTTCACTTGCAAAAGTTGCTGATTCTGATGTCAGAGCATTTATCGAAAAATGTATCGCCAATGTCTCTGATCGTTTATCAGCCAGTGATCTTTTACGGGACCCATTTCTCCAATGTGATGATGATCATGGCAGTGTACATCGTCGTCCTTTACAACCGAAAATCCATCAAACAGAACCAAGTACTGATTACCAGGTTGGTGCCAGCGCTCTGGATACTTCTGCTGAGGCAAGTAGAGATTTTACAGTACAAGGACAGAGGAAGGACGCGAACACTATATTTCTCAAATTAAAGATACCAGATTCCTCAGGTGATTTCCGCAATATCCACTTCCCATTTGATATCGAGGCAGACACAGCGATTACCGTGGCCAGTGAAATGGTCCAGGAGCTTTCCCTAACATACCAAGACGTCTCAACCCTAGCTGAAATGATCGACTCAGAAATTCGGGCCCACATCCCCGACTGGACACCACAAGAACATTTCAGTGATAGTTCCGAAGGAGAAGTCGCAATTTCTGATAGCCCTGCTGTCATGGGAACCAATGATGAGGATGACAAAGAAGATAATGATAATGATGGTTATGAGGCCTCTCCCTTGTCTATTGAATTGAACCAATTAACTCAAATGGGTAATCTTGCAGTAGAAAGAACCCTTTCTGGTCGTAAATATTGGTCCGATTCTCCCAAGGGAGATGGTGGAAACTCTCAGGCTATGTTGTTGCCTCCTTCTAACTTGTCTCCTAAAACCGATACAATCCAAGAAATTCCTTCCAGTTCAGAAGTTGGATCTAGTGATGGTGTATTGGAGCAGGTTGAATCAGAAGCTGCCAATTTAATTGCTGAGGAACTTGATAAATTGTTGATGCTGCAAAAAGAGGAGATGGATGAATTAGTGAGGAAGCATAAAGCAGCCATATCAGAGCTTCTGCAAGAACTCTCCCCGGAAAAATATCGGGAAGTTTTGAGAATATGTAAGGTGAAGATTCCAGAATAA 1743 42.46 MQQDLSSEQESDDPDSEFVEVDPTGRYGRYKEILGKGAFKKVYRAFDELEGIEVAWNQVKVVDLLQHSEDLERLYSEVHLLKTLKHKNIIKLYNSWVDTKKENINFITEIFTSGTLRQYRKKHKHVDLRALKKWSRQILEGLFYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRQARSAHSVIGTPEFMAPELYEEEYNELVDIYAFGMCLIELVTVEYPYVECANAAQIYKKVTSGIKPASLAKVADSDVRAFIEKCIANVSDRLSASDLLRDPFLQCDDDHGSVHRRPLQPKIHQTEPSTDYQVGASALDTSAEASRDFTVQGQRKDANTIFLKLKIPDSSGDFRNIHFPFDIEADTAITVASEMVQELSLTYQDVSTLAEMIDSEIRAHIPDWTPQEHFSDSSEGEVAISDSPAVMGTNDEDDKEDNDNDGYEASPLSIELNQLTQMGNLAVERTLSGRKYWSDSPKGDGGNSQAMLLPPSNLSPKTDTIQEIPSSSEVGSSDGVLEQVESEAANLIAEELDKLLMLQKEEMDELVRKHKAAISELLQELSPEKYREVLRICKVKIPE 580
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 356792 360640 + Conep16aG0007100.1 Cone16ag0070 454504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone16ag0070 580 CDD STKc_WNK 26 286 - -
Cone16ag0070 580 Pfam Protein kinase domain 31 286 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone16ag0070 580 ProSitePatterns Serine/Threonine protein kinases active-site signature. 152 164 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone16ag0070 580 SMART serkin_6 28 286 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone16ag0070 580 MobiDBLite consensus disorder prediction 407 446 - -
Cone16ag0070 580 FunFam Probable serine/threonine-protein kinase WNK1 13 109 - -
Cone16ag0070 580 Coils Coil 530 561 - -
Cone16ag0070 580 Gene3D - 340 431 - -
Cone16ag0070 580 SUPERFAMILY Protein kinase-like (PK-like) 30 318 IPR011009 -
Cone16ag0070 580 Gene3D Phosphorylase Kinase; domain 1 11 109 - -
Cone16ag0070 580 ProSiteProfiles Protein kinase domain profile. 28 286 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone16ag0070 580 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 10 434 IPR050588 GO:0004674(PANTHER)|GO:0005737(PANTHER)|GO:0006468(PANTHER)|GO:0035556(PANTHER)
Cone16ag0070 580 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 344 398 IPR024678 GO:0004674(InterPro)|GO:0005524(InterPro)
Cone16ag0070 580 Gene3D Transferase(Phosphotransferase) domain 1 111 292 - -
Cone16ag0070 580 MobiDBLite consensus disorder prediction 1 22 - -
Cone16ag0070 580 FunFam probable serine/threonine-protein kinase WNK9 111 291 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone10ag0695 Cone-Chr10:3509380 Cone16ag0070 Cone-Chr16:356792 2.90E-114 dispersed
Cone15ag1222 Cone-Chr15:9719898 Cone16ag0070 Cone-Chr16:356792 1.02E-126 dispersed
Cone16ag0070 Cone-Chr16:356792 Cone7ag0248 Cone-Chr7:1045463 1.03E-173 dispersed
Cone16ag0070 Cone-Chr16:356792 Cone2ag0933 Cone-Chr2:35077677 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82187 PF02847 MA3 1.70E-26 CL0020 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone16ag0070 K08867 - csv:101206177 748.429