Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone16ag0075 ATGGCCCCTTGTCCTTCAGTCGTCCTCACCTCATTCCTCCTCCTCCTCTTCCTCTCCTTCTCCTTCTTCCCTTCTTCCTCCGCGATAGACTTCCTCTTCAACTCCTTCTCTTCCGCCTCCAACACCACCGACCTCCTTCTCATCAGCGATGCCCGCTTCGACCCCCCCGTCATCCGCCTCAGCAACGACTCAAACCAATACTCCTACGGCCGCGTCTTCTACCCCACAAAGCTCAAGCTCAAACCCACTTCAAATTCGACATCCATTTCCTCCTTCTCAACTTCCTTTGTCTTCTCAATCTTACCCGAAATCGCTTCAAGCCCTGGATTCGGCCTCACCTTCGTCCTCTCCAACACCACCTCCCCGCCAGGCGCTCTAGCAGGTCAATATTACGGCCTGTTCAGTAACTCCACTTCCCCTTCTGTCGCTCCATTAATCGCCGTAGAATTCGATACAGGCCAGAACCCGGAATTCAACGACCCAGATGGAAATCATATCGGTATTGATTTGAACAACATCGAATCGATAAAAATTCAACCAGCTGGATATTATGACGATTCGAACAATAATCAATTTGTTCCTGTTCAGATGAGAAATGGTCATAATATTCATGTTTGGATTGAGTTTAACGGTTCTAGTTCTGAAATCAATGTTACTCTTTGCCCTTATGGGATTTCTAGACCTTCAAGGCCTACTCTTTCTTTTAGTAATCCAATTCTGGCGAACTATGTTTCCTCCGAGATGTATGTTGGATTTTCGGCTTCTAAAGTGAATTGGGTTGAGGTGCAGAGGATTTTGGCTTGGAGTTTGAGTGATACAGGGGTTGCTAGAGAGATAAACTCGACAAGTTTTCCGATTTTTAAAGCGGAATCTTCTTCTTCTTCGTTATCTCCAGGTGCTATTTCCGGGATTGTGATTGCTTGTTTGGTGGTATTGATCGTTTTCGGTTCTGGGTTTTACTTGTTTTGGTGGAAGAAGGGGTTGTTAGAAGATGATGAAGAAAATGAAGATTGGGAGCTTGAATATTGGCCTCACAGATTCTCATTTGAAGAGCTTTCCGAAGCCACTAATGGGTTCTCAAGTGATCAACTTTTAGGTTCGGGTGGGTTCGGAAAAGTTTATAAAGGAACTTTTCCGAACAACGGCACAGAATTTGCGGTAAAATGTGTTAACCATGATTCAAAACAAGGGTTGAGAGAATTCATGGCGGAGATTTCAAGCATGGGTAGATTACAACACAAAAACTTAGTCCAAATGAGAGGTTGGTGTAGGAAGAAGACACAACTCATGCTTGTTTATGATTATATGCCGCACGGAAGCCTAAACCGGTGGATTTTTGATAAACCTGAAAAGCTATTGAGCTGGACTCAAAGGCGACAAGTTTTAGCTGATGTGGCGGAGGGGTTGACATACCTACACCATGGGTGGGATCAGGTGGTGGTTCATAGAGATATCAAGTCGAGCAATGTGTTGTTGGATTCAGACATGAGAGCTAGGGTTGGTGATTTTGGTCTAGCCAAGTTGTATCAACACGGTGAAGTTCCGAACACTACTAGGGTTGTCGGGACACTAGGGTACTTGGCCCCTGAGCTAGCCACAGCTGCTGCTCCCACTGCAGCTAGTGATGTGTTTAGTTTTGGAGTGGTGGTGTTGGAGGTGTCTTGTGGTCGTAGGCCGATAGATTTGGGATTGAAGGAGGAGGAAGAGGTTTTGATTGATTGGGTGAGGGATCTTTATGTTTGTGGGAAGGTTAGTGAGGGAGGGGATAAGAGGATAAAGGGCGAGTATGAAGTGGAGGAGATGGAGATGGTATTGAAACTTGGTTTGGCTTGTTGTCATCCCGATCCCCAACAGAGGCCGAGTATGAAGGAGGTGGTTGCGGTTTTGGCTGGTGACAGGGTGGCAGCCCCACCGACTGACTTGTTGTCTGAACTGAGACGAGGAGATAATATTAGAATTCAGATGGAAAATGATAGTGGTGATTCTAGTGTTGATCGGAATGAGGTTAGGTCTTCCTAA 2019 45.86 MAPCPSVVLTSFLLLLFLSFSFFPSSSAIDFLFNSFSSASNTTDLLLISDARFDPPVIRLSNDSNQYSYGRVFYPTKLKLKPTSNSTSISSFSTSFVFSILPEIASSPGFGLTFVLSNTTSPPGALAGQYYGLFSNSTSPSVAPLIAVEFDTGQNPEFNDPDGNHIGIDLNNIESIKIQPAGYYDDSNNNQFVPVQMRNGHNIHVWIEFNGSSSEINVTLCPYGISRPSRPTLSFSNPILANYVSSEMYVGFSASKVNWVEVQRILAWSLSDTGVAREINSTSFPIFKAESSSSSLSPGAISGIVIACLVVLIVFGSGFYLFWWKKGLLEDDEENEDWELEYWPHRFSFEELSEATNGFSSDQLLGSGGFGKVYKGTFPNNGTEFAVKCVNHDSKQGLREFMAEISSMGRLQHKNLVQMRGWCRKKTQLMLVYDYMPHGSLNRWIFDKPEKLLSWTQRRQVLADVAEGLTYLHHGWDQVVVHRDIKSSNVLLDSDMRARVGDFGLAKLYQHGEVPNTTRVVGTLGYLAPELATAAAPTAASDVFSFGVVVLEVSCGRRPIDLGLKEEEEVLIDWVRDLYVCGKVSEGGDKRIKGEYEVEEMEMVLKLGLACCHPDPQQRPSMKEVVAVLAGDRVAAPPTDLLSELRRGDNIRIQMENDSGDSSVDRNEVRSS 672
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 371704 373722 + Conep16aG0007600.1 Cone16ag0075 454509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone16ag0075 672 FunFam L-type lectin-domain containing receptor kinase S.1 344 435 - -
Cone16ag0075 672 FunFam L-type lectin-domain containing receptor kinase S.4 27 278 - -
Cone16ag0075 672 ProSitePatterns Protein kinases ATP-binding region signature. 365 388 IPR017441 GO:0005524(InterPro)
Cone16ag0075 672 FunFam L-type lectin-domain containing receptor kinase S.4 436 640 - -
Cone16ag0075 672 SUPERFAMILY Concanavalin A-like lectins/glucanases 29 276 IPR013320 -
Cone16ag0075 672 Gene3D Transferase(Phosphotransferase) domain 1 436 636 - -
Cone16ag0075 672 ProSitePatterns Legume lectins beta-chain signature. 146 152 IPR019825 -
Cone16ag0075 672 SMART serkin_6 359 634 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone16ag0075 672 CDD STKc_IRAK 365 629 - -
Cone16ag0075 672 Gene3D - 27 290 - -
Cone16ag0075 672 MobiDBLite consensus disorder prediction 646 672 - -
Cone16ag0075 672 ProSiteProfiles Protein kinase domain profile. 359 642 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone16ag0075 672 Pfam Legume lectin domain 29 282 IPR001220 GO:0030246(InterPro)
Cone16ag0075 672 ProSitePatterns Serine/Threonine protein kinases active-site signature. 480 492 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone16ag0075 672 PANTHER - 50 637 IPR050528 GO:0005886(PANTHER)
Cone16ag0075 672 Pfam Protein kinase domain 361 626 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone16ag0075 672 CDD lectin_legume_LecRK_Arcelin_ConA 29 274 IPR001220 GO:0030246(InterPro)
Cone16ag0075 672 SUPERFAMILY Protein kinase-like (PK-like) 340 636 IPR011009 -
Cone16ag0075 672 Gene3D Phosphorylase Kinase; domain 1 344 435 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone16ag0075 Cone-Chr16:371704 Cone19ag1343 Cone-Chr19:8943281 5.26E-151 dispersed
Cone16ag0075 Cone-Chr16:371704 Cone16ag0076 Cone-Chr16:376673 0 tandem
Cone16ag0075 Cone-Chr16:371704 Cone6ag1511 Cone-Chr6:11942173 1.42E-77 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82188 PF08614 ATG16 2.90E-13 No_clan Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone16ag0075 - - - 0.0