Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone16ag0076 ATGGCACCTCTTCCTTCACTCCGTCTCCTCCTCCTCCCACTCCTCTTCTCCTTCTCTCCTTATTCCTCCGCCATAGACTTCCTCTTCAACTCCTTCTCCACCTCCAACGCTACCGACCTCCTCCTCATCCGCGATGCCTACTTCGAACCCCCCGTCATCCGCCTCAACAACGACTCAAACCAATACTCCTACGGCCGCGTCTTCTACCCCACAAAGCTCAAGCTGAAACCCACTTCAAATTCGACATCCATTTCCTCCTTCTCAACTTCCTTCGTCTTCTCAATCTTACCCGATAGTGCTTCAAGCCCTGGATTCGGCTTCACCTTCGTCCTCTCCAACTCCACATCCCCGCCCGGCGCTTTAGCCAGCCAGTATTACGGCTTGTTTAGTAACTCCCATTCTATTGCTCCATTAATCGCCGTAGAATTCGATACAGGCCAGAGCCCGGAATTTAACGACCGAGATGGGAATCATATCGGAATTGATTTGAACAGCCTCGAATCAATAGAAGCTCACCCGGCCGGATATTATGACGATTCAAACAATAATCAATTTGTTCCTGTTCAGATGAGAAATGGTAAGAATATTCATGTTTGGATCGAGTTTAACGGTTCTAGTTTTGAAATCAATGTTACTCTTTGCCCTTATGGGATTTCTAAACCTTCAAGACCAACTCTTTCTTTTAGTAATCAGATTCTGGCAAATTATGTTTCGTCCGAGATGTACGTTGGATTTTCGGCTTCTGAAATGACTTGGGATGAGGCGCAGAGGATTCTGGCTTGGAGTTTGAGTGATATAGGGGTTGCTAGAGAGATAAACTCGACGAATTTTCCGAATTTTAAAGCGGAATCTTCTTCTTCTTCGTTATCTCCGAACGCTATATCTGGGATTGTGATTGCTTGTTTGGTGGTATTGATAATTTTCGGTTCTGGGGTTTACTTGTTTTGGTGGAAGAAGAGTTTGTTAGAAGATAACGAAGAAGTTGAAGATTGGGAGCTTGAATATTGGCCTCATAGATTCTCATTTGAAGAGCTTTCCGGAGCCACTGATGGGTTCTCAAGTGAACAACTTTTAGGTTCAGGTGGGTTCGGAAAAGTTTATAAAGGAACTTTTCCGAACAATGGCACAGAATTTGCGGTGAAATGTGTTAACCATGATTCAAAACAAGGTTTGAGAGAATTCATGGCGGAGATTTCGAGCATGGGGAGATTACAACACAAAAACTTAGTCCAAATGAAAGGTTGGTGTAGGAAGAAGACACAACTCATGCTTGTTTATGATTATATGCCGCACGGAAGCCTAAACCGGTGGATTTTTGATAAGCCTGAAAAGCTATTGAGCTGGACTCAAAGGCGACAAGTTTTAGCTGATGTGGCGGAGGGGTTGACATACCTACACCATGGGTGGGATCAGGTGGTGGTTCATAGAGATATCAAGTCGAGCAATGTTTTGTTGGATTCAGACATGAGAGCTAGGGTTGGTGATTTTGGTCTAGCCAAGTTGTATCAACACGGTGAAGTTCCGAACACTACTAGGGTTGTCGGGACACTAGGGTACTTGGCCCCTGAGCTAGCCACAGCTGCTGCTCCCACTGCAGCTAGTGATGTGTTTAGTTTTGGAGTGGTGGTGTTGGAGGTGTCTTGTGGTCGTAGGCCGATAGATTTGGGATTGAAGGAGGAGGAAGAGGTTTTGATTGATTGGGTGAGGGATCTTTATGTTTGTGGGAAGGTTAGTGAAGGAGGGGATAAGAGGATTAAGGGCGAGTATGAAGTGGAGGAGATGGAGATGGTATTGAAACTTGGTTTGGCTTGTTGTCATCCCGATCCCGAACGGAGGCCGAGTATGAAGGAGGTGGTTGCGGTTTTGGCTGGTGACAGGGTGGCAGCCCCCTCGGCTGACTTGCTGTCTGAACTGAGACGAGGAGATAATATTAGAATTCAGATGGAAAATGATAGTGGTGATTCTAGTGTTGATCGGAATGTGGTTAGGTCTTCCTAA 1998 45.7 MAPLPSLRLLLLPLLFSFSPYSSAIDFLFNSFSTSNATDLLLIRDAYFEPPVIRLNNDSNQYSYGRVFYPTKLKLKPTSNSTSISSFSTSFVFSILPDSASSPGFGFTFVLSNSTSPPGALASQYYGLFSNSHSIAPLIAVEFDTGQSPEFNDRDGNHIGIDLNSLESIEAHPAGYYDDSNNNQFVPVQMRNGKNIHVWIEFNGSSFEINVTLCPYGISKPSRPTLSFSNQILANYVSSEMYVGFSASEMTWDEAQRILAWSLSDIGVAREINSTNFPNFKAESSSSSLSPNAISGIVIACLVVLIIFGSGVYLFWWKKSLLEDNEEVEDWELEYWPHRFSFEELSGATDGFSSEQLLGSGGFGKVYKGTFPNNGTEFAVKCVNHDSKQGLREFMAEISSMGRLQHKNLVQMKGWCRKKTQLMLVYDYMPHGSLNRWIFDKPEKLLSWTQRRQVLADVAEGLTYLHHGWDQVVVHRDIKSSNVLLDSDMRARVGDFGLAKLYQHGEVPNTTRVVGTLGYLAPELATAAAPTAASDVFSFGVVVLEVSCGRRPIDLGLKEEEEVLIDWVRDLYVCGKVSEGGDKRIKGEYEVEEMEMVLKLGLACCHPDPERRPSMKEVVAVLAGDRVAAPSADLLSELRRGDNIRIQMENDSGDSSVDRNVVRSS 665
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 376673 379226 + Conep16aG0007700.1 Cone16ag0076 454510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone16ag0076 665 SUPERFAMILY Concanavalin A-like lectins/glucanases 25 265 IPR013320 -
Cone16ag0076 665 CDD lectin_legume_LecRK_Arcelin_ConA 25 264 IPR001220 GO:0030246(InterPro)
Cone16ag0076 665 ProSitePatterns Serine/Threonine protein kinases active-site signature. 473 485 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone16ag0076 665 Gene3D Phosphorylase Kinase; domain 1 337 428 - -
Cone16ag0076 665 PANTHER - 50 626 IPR050528 GO:0005886(PANTHER)
Cone16ag0076 665 ProSitePatterns Protein kinases ATP-binding region signature. 358 381 IPR017441 GO:0005524(InterPro)
Cone16ag0076 665 ProSitePatterns Legume lectins beta-chain signature. 139 145 IPR019825 -
Cone16ag0076 665 FunFam L-type lectin-domain containing receptor kinase S.4 429 634 - -
Cone16ag0076 665 MobiDBLite consensus disorder prediction 648 665 - -
Cone16ag0076 665 Pfam Legume lectin domain 25 276 IPR001220 GO:0030246(InterPro)
Cone16ag0076 665 FunFam L-type lectin-domain containing receptor kinase S.1 337 428 - -
Cone16ag0076 665 ProSiteProfiles Protein kinase domain profile. 352 627 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone16ag0076 665 Gene3D - 23 283 - -
Cone16ag0076 665 Gene3D Transferase(Phosphotransferase) domain 1 429 632 - -
Cone16ag0076 665 MobiDBLite consensus disorder prediction 646 665 - -
Cone16ag0076 665 SUPERFAMILY Protein kinase-like (PK-like) 333 624 IPR011009 -
Cone16ag0076 665 Pfam Protein kinase domain 353 619 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone16ag0076 665 SMART serkin_6 352 627 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone16ag0076 Cone-Chr16:376673 Cone19ag1343 Cone-Chr19:8943281 4.76E-153 dispersed
Cone16ag0075 Cone-Chr16:371704 Cone16ag0076 Cone-Chr16:376673 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82189 PF12146 Hydrolase_4 4.60E-07 CL0028 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone16ag0076 - - - 0.0