Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone16ag0077 ATGGCCACAAAAACCACTCTTCTTGCTTCTCTAAGAGTGTTAATGATCTTGATATTTTGTGGATGGGTCTCTCTTTGGCTACTCAAACCCACAGATCTTTGGATCAGACAATGGAAAAAAGCCGAAGATGGCACTCGATCCACCATTGTCGGATATTACGGTCTGAATTTTGCTGTATTCACATTTCCTCTAATTGGTTTGACAATAGTTGGTCTTGTTTACTTGAATCTCCTATCTTGGAAGCCATATAGAAGACAAGCAACCTATTCAACAACTTTCTCGAATCCGCTTGTCGTGAGCAGACTTGTCGGAGTTCTGTCCGGTATTGAGATTCTCTCTGTTTCTCTCTTCATCCTCTTTCTAGCATGGACTTTCTATGCACAGATTTCAGGCGATTTGATCAAGTTAATGCCTATCAAATCGCTCGAGTTGAAAATTTGGGAACTTAAGTATTTAAGGGTGGCAACAAGGTTTGGGTTGTTAGCAGAAGCCTGTTTGGCTCTACTTCTTCTTCCGATCCTAAGAGGGTTATCCTTATTCCGATTGCTCGGAATACAGTTCGAAGCTTCGGTTAAATACCATATATGGCTCGGGACCTCAATGATATTCTTTGCTACTTGTCATGGTGGAAGCACCTTGTTTGTTTGGGGGGTCAGCCAGTATATTCGGGATGAGACGCGGAAATGGCAGAGTTCAGGGCGGATATACCTTGCAGGGGAGATAACTTTGGTTACCGGTTTAGTGATATGGATCACATCTCTTCCTCAAGTAAGGAGGAAAACGTTTGAGATATTCTACTTTACACACCATCTATACATCATATTTCTAGTATTTTACTTGTTTCATGCTGGAGATAGACACTTCTACACGGTTTTTTCCGGAATCTTTCTCTTCGGCCTTGACAAGATCCTCCGGATCATACAATCAAGACCCGAAAGTTGCATTCTATCCGCTCGAGTGTTTCCATGCAAATCCGTAGAACTTATTCTTCCAAAGGATTCAAGACTAAAGTACGCGCCAACAAGTGTTGTTTATGTGAAAATTCCAAGCATATCGAAATTTCAATGGCATGCTTTTAGCATAACTTCAAGTTCTAAAGTTGATGATTATACAATTTCGATTATGATCAAATGTGAAGGATCATGGACTAATTCTCTCTATGAAATGATAAACAACAATCTCGAACTGGATTCGGTTCCACTAAAGTGCATACCGGTTGCAATTGAAGGCCCTTATGAGCCAGCCTCTATGGACTTCTTGAGTTATGATAGTTTGCTTGCTATTGGGGGTGGAATCGGAATAACACCAATTCTAAGCATTTTGCAAGAAATCGGTTCGGCTAAAGCCGGGAATTTGTCAAGTTCAGCCAAAGCTGGGAGCAGATACAAATTCCCAATGAGAATACAACTTATACACGTGGTGAAGAAATCTCAAGACATTTCTTTGTTGAATTCAATCTCCGATTTACTTTCTGAGCAATCGTCCGAAGGATTGAATCTAAAACTCAAAGTATTTGTGACTAAAGAAGAGGATTCGGGTGAAAGTTTAAGTGAACTAATGAAAGAACGCTTCTCTCAAATACAAACTACAAATTTCAGCACAAAATGTTCGAATAACCCCGTACAAGGGCTCGGAAGTGTACTTTGGATGGCAGGTATAACTATGATATCGTCCGTTGTGTTCCTCTTTTTCCTAATTTGTTTCAACCGTATAGCTGTTCCGGCCGATAAGAAAGTAAAGAAAATCCCGAAACACGGCAAAGTCGCTAAAGATAAGACAGCTTCCTCGGTTTTAGATCTGCTTCTCATTGCATCCTTCTTTCTAGCCGTACTAAGCTGTGCGATTATAGCTATTGCTTTGAGATGGAGAAGATTAAAGAAAGGTGCTCCGCCAATCTTGCAAAAACAAGGAGGAAAAGACATGGAGCTAATCAATTCAGCAACAACAAGGAGTGTACTTGAAGAACATGAAATTCATTTCGGAAGAAGACCAAACTTTCAAGATATATTCTCGGGATTTCGAAACGAAATTGGTGAAAGAGAGGTCGGAGTTTTGGTTTGTGGACCGGAATCAATGAAGGAGTCGGTGGCAATAGCATGCAAGCAAAACTCTCGAAGTTGCAAAATGAGTGGAGAGCGAAATAAACTGTGCTTCAATTTCCACTCCCTCAACTTCACACTGTAG 2184 40.66 MATKTTLLASLRVLMILIFCGWVSLWLLKPTDLWIRQWKKAEDGTRSTIVGYYGLNFAVFTFPLIGLTIVGLVYLNLLSWKPYRRQATYSTTFSNPLVVSRLVGVLSGIEILSVSLFILFLAWTFYAQISGDLIKLMPIKSLELKIWELKYLRVATRFGLLAEACLALLLLPILRGLSLFRLLGIQFEASVKYHIWLGTSMIFFATCHGGSTLFVWGVSQYIRDETRKWQSSGRIYLAGEITLVTGLVIWITSLPQVRRKTFEIFYFTHHLYIIFLVFYLFHAGDRHFYTVFSGIFLFGLDKILRIIQSRPESCILSARVFPCKSVELILPKDSRLKYAPTSVVYVKIPSISKFQWHAFSITSSSKVDDYTISIMIKCEGSWTNSLYEMINNNLELDSVPLKCIPVAIEGPYEPASMDFLSYDSLLAIGGGIGITPILSILQEIGSAKAGNLSSSAKAGSRYKFPMRIQLIHVVKKSQDISLLNSISDLLSEQSSEGLNLKLKVFVTKEEDSGESLSELMKERFSQIQTTNFSTKCSNNPVQGLGSVLWMAGITMISSVVFLFFLICFNRIAVPADKKVKKIPKHGKVAKDKTASSVLDLLLIASFFLAVLSCAIIAIALRWRRLKKGAPPILQKQGGKDMELINSATTRSVLEEHEIHFGRRPNFQDIFSGFRNEIGEREVGVLVCGPESMKESVAIACKQNSRSCKMSGERNKLCFNFHSLNFTL 727
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 379740 382887 - Conep16aG0007800.1 Cone16ag0077 454511

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cone16ag0077 727 Pfam Ferric reductase like transmembrane component 158 279 IPR013130 -
Cone16ag0077 727 SFLD Ferric reductase subgroup (FRE) 7 725 - -
Cone16ag0077 727 PANTHER NADPH OXIDASE 16 725 IPR050369 GO:0000293(PANTHER)|GO:0005886(PANTHER)
Cone16ag0077 727 Pfam Ferric reductase NAD binding domain 422 700 IPR013121 GO:0016491(InterPro)
Cone16ag0077 727 Gene3D - 406 547 IPR039261 -
Cone16ag0077 727 Gene3D - 626 725 IPR039261 -
Cone16ag0077 727 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 299 418 IPR017927 GO:0016491(InterPro)
Cone16ag0077 727 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 423 702 IPR039261 -
Cone16ag0077 727 CDD NOX_Duox_like_FAD_NADP 315 508 - -
Cone16ag0077 727 Pfam FAD-binding domain 316 415 IPR013112 GO:0016491(InterPro)
Cone16ag0077 727 SFLD Ferric Reductase Domain 31 726 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone16ag0077 K00521 - - rcu:8278296 850.506
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone16ag0077 Cone-Chr16:379740 Cone5ag0886 Cone-Chr5:3805421 4.40E-105 dispersed
Cone16ag0077 Cone-Chr16:379740 Cone2ag0929 Cone-Chr2:35055143 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g813 . . . . . . . . . . Cma10g00097 . Car10g00085 . . . . . . . . . . . . . . . . . . Cone2ag0929 Cone16ag0077 . . . . . . . . . . . . . . . Cmo10g00100 . . . . . . Cpe18g00866 . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0011006 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 1 1 1 1 1 1 1 1 1 1 31