Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone16ag0095 ATGAGCAATGGAGAGGGGACTCGTGAGAACGTCTCAGAAGTCGCTTCTCCCGATTCGTTAGAAGATTCTATGGTGCTATGGCGTGGCCAGAATCCTCTAATAACGGACGGTGCTGATGCAGATTCGTCTGCGCCGTCTCAATACTCTTCTTGTGTGGGTTCCGATTTTGATCGGTACTGTAGTGCGAACTCAGTCATAGGCACGCCTAGTATGTGTAGCACAATCACTGTTTTTAACGATTGCACTGATTCTGAGCTTGGTACTGTTAGAAATGTTGGATTTGCAGATGATAGTGGTGTGGAGAATTTTAGTTTGGGAGGGAACTTTGAAAGGAATCAGTCAGGTATGGAATTTTTGGGTGATAGAAAGATTGAATTGAGAAAACGAAGTGTAGTGGGTGAGCCGAGTATTAGATATGGGTCGAGTGGATTGGAAATGTATGATGATGGAGAGTTTGAAATGTTGAATGAGGTTAATCATGGAGGTCTTGATGAAATGATGTCATGGAAGATTGAGAATGGCCCTTGCTTGGATTCAGTTCCTTGTGTGGAGTTGAATAGTAGTTCAGATAAAGGTGATGAAGGCTTTGCAGGAGCCAGAGGTAATGATGGACTTTCTAGTAAAGAAGATGTTGAGTCAAAAGGTATGGAGGGGAGAAAGTCTGAAGTTGTGAGAACTGTTGACAAGTGTTCTTCGTCTTGTGTTGTTGGGGCAAAGGGTAATATGGATTTTGATGGAAGGGAGAATGAAAGGGAGGAAGATGGGACCTCATCAAGATTTAAGCATTTGGAGGGTGAGGATTCTTTATACAACTACGGAAATGATGATGACCATGGGACTGATACACATTTCCAAAGAGACTTTCACTATCTTGAGCAAGCAAAAGATAGGAATGAAAATCCATTGCATATGAACTCATCAGTAGCTTTTGGTTCAGATGATTGGGATGATTTTGAGCTTGAAACTGGGGGGCACACTCAAGTTTCTTTGACCGTGGAAGTTTTCCAGAACAAAAGAGGAAAGAATCCAAATTCCTTTTCTATGGCCGTTCCTATTTCTCAAGTTACTGAACAACCATTGGAAGGAGTAGACATAAGAGAGATTCCATTAGCAAGCAAAGAGGCTGTAGGTGACAAACCTGAGGTGAATGTTAACAGTAGTAAAGCGGAAGTGAGAGACATTCCGGTGGCCAGTTGTCGAGTCGAAGATGCTTCTAATTTGACTGAAGTTGCAAAAAGCTCTTTTGTGACTGAAATTAGATCTCCAGCTGTTGTTGGACAAAAGCAAGAAGATGCAAAGGACGTTCCTGTCTCCAAAAGTGAAGTCCAAGATTTTGATGAACTGGGTAATGTTAAAAGTCTCACTTTTGATAAAATTGTAAGGATGGACCTTGATGAACTATCAGAAAAAGTTCCTTTAGAGGCGCGATCAGCCATTATGGATTGTGTTATGGAAAAAGCAGAAGAATGTATTAAAACTGAAGAAGTCGTTGGCAGTGGTCATAGTGAAGTTTCAAAAAATGAAGGATTGGAGACTTCAAAACTAAAACTGGATCCTCTTTCTGATGTTATCACAAGTCAACTTTATACACATTCTATGGAATCTCCTGAGAATATAAAAAAGTTACATAAAGACCATCACCGGGAGCCATTCCACTGTACCTCTGAAAGTAAATCGGAGAAGGTTTCATCTGTTTCAAAAAATCTTACCGACAATCATCTTGACACAGTCGAGCTAGACAATCTTGAGATAAATGAACTCTATGATGAGGTTGTCCTTGAAATGGAAGAAATTTTACTCGACTCTGTTGACTCTCCTGGGGCAATGTTCTCTCAGGGAAATAAAATGTTTCAATCACATCGATCTCTACCATTAAGAGATGGCAGTTCGACAGCTTCTACTTCTGGCAACAATGATGTTTTCTCACATAATCAACAGACAGTTAGAATTGATGAAGTAGAAGTAGTAGGTGCAAGACAGAAAATGGGTGATGTTTCATTCAGTGAAAGGCTAGTGGGGGTGAAGGAATACACTGTGTATAAAATCCGGATCTGGAGTGGGACAGATCAATGGGAAGTTGAACACAGATATCGAGACTTTTATTCTCTTTATTGTCAGTTGAAAACATTATTCACCGACAAGGGGTGGACACTACCTTCTCCCTGGTCCTCCGTAGAAAAGGAGTCTCGCAAGATATTTGGTAATGCATCCCCTGATGTGATTACGGAGAGAAGTGCTATTATCCAAGAATGTGTCCGTTCAGTGCTCCATTATAGGTTTTTCTCCACCTCGCCAAATGCATTAATTTGGTTTTTGTCCCCTCAAGATTCATCTCCCAAATCTTCTTCCTCTAATACAGTGATGCCTCACTCTTCCGCTTCTCCAAGAGGTCCAGATACACAGAACTTTTTTTCATTAGGAAAGACCATTTCACTTATTGTTGAGATTAGGCCATACAAATCCATGAAACAGATGCTGGAATCTCAGCATTATAGCTGTGCTGGATGCCATAGATATTTTGGTGATGGAAAAACGCTGATTCAGGAGTTTGTGCAGACATTTGGATGGGGCAAGCCACGGCTTTGTGAATACACTGGTCAACTATTTTGTGCTTCATGTCATGCAAATGATACTGCTGTCTTACCAGCAAGGGTCTTGCACCATTGGGATTTTATGCGATATCCAGTTTCACAGATGGCTAAATCGTATTTGGATTCTATACATGATCAGCCCATGCTATGTATCAGTGCAGTGAATCCTTTCCTGTTCTCAAAGGTTTCATCCCTGCTAAATGTTATGGGTATCAGGAAAAAGATAGGAACCATACTTCCCTATGTTCGCTGCCCATTCCGTAAATCCATTAACAGAGGGCTTGGTTCTAGAAGATATCTTCTTGACAGCAATGACTTTTTCGCACTTAGAGACCTCATTGACCTCTCCAAGGGGGCATTTGCAGCACTACCTGCTATGGTGGACACAATCTCAAGAAAAATTATGGAGCATATTGCAGAGCAATGCCTGGTTTGCTGTGACGTAGGCATCCCTTGTGGTGCTCGAAAATTTTGTAGCGACCCATCTTCTCTTATTTTTCCTTTCCAGGAAGGTGAGGTCGAAAAATGTACCTCTTGTCAATCAGCATTTCATAAACCTTGCTTCAAAAAGCTCACAAGGTGCCCTTGTGGGCAAATTCTTCGAGCCGATGAGACAGTATGA 3213 41.39 MSNGEGTRENVSEVASPDSLEDSMVLWRGQNPLITDGADADSSAPSQYSSCVGSDFDRYCSANSVIGTPSMCSTITVFNDCTDSELGTVRNVGFADDSGVENFSLGGNFERNQSGMEFLGDRKIELRKRSVVGEPSIRYGSSGLEMYDDGEFEMLNEVNHGGLDEMMSWKIENGPCLDSVPCVELNSSSDKGDEGFAGARGNDGLSSKEDVESKGMEGRKSEVVRTVDKCSSSCVVGAKGNMDFDGRENEREEDGTSSRFKHLEGEDSLYNYGNDDDHGTDTHFQRDFHYLEQAKDRNENPLHMNSSVAFGSDDWDDFELETGGHTQVSLTVEVFQNKRGKNPNSFSMAVPISQVTEQPLEGVDIREIPLASKEAVGDKPEVNVNSSKAEVRDIPVASCRVEDASNLTEVAKSSFVTEIRSPAVVGQKQEDAKDVPVSKSEVQDFDELGNVKSLTFDKIVRMDLDELSEKVPLEARSAIMDCVMEKAEECIKTEEVVGSGHSEVSKNEGLETSKLKLDPLSDVITSQLYTHSMESPENIKKLHKDHHREPFHCTSESKSEKVSSVSKNLTDNHLDTVELDNLEINELYDEVVLEMEEILLDSVDSPGAMFSQGNKMFQSHRSLPLRDGSSTASTSGNNDVFSHNQQTVRIDEVEVVGARQKMGDVSFSERLVGVKEYTVYKIRIWSGTDQWEVEHRYRDFYSLYCQLKTLFTDKGWTLPSPWSSVEKESRKIFGNASPDVITERSAIIQECVRSVLHYRFFSTSPNALIWFLSPQDSSPKSSSSNTVMPHSSASPRGPDTQNFFSLGKTISLIVEIRPYKSMKQMLESQHYSCAGCHRYFGDGKTLIQEFVQTFGWGKPRLCEYTGQLFCASCHANDTAVLPARVLHHWDFMRYPVSQMAKSYLDSIHDQPMLCISAVNPFLFSKVSSLLNVMGIRKKIGTILPYVRCPFRKSINRGLGSRRYLLDSNDFFALRDLIDLSKGAFAALPAMVDTISRKIMEHIAEQCLVCCDVGIPCGARKFCSDPSSLIFPFQEGEVEKCTSCQSAFHKPCFKKLTRCPCGQILRADETV 1070
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 529173 535019 + Conep16aG0009600.1 Cone16ag0095 454529

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cone16ag0095 1070 MobiDBLite consensus disorder prediction 622 641 - -
Cone16ag0095 1070 SMART PX_2 664 775 IPR001683 GO:0035091(InterPro)
Cone16ag0095 1070 Pfam Rubicon Homology Domain 860 1061 IPR025258 -
Cone16ag0095 1070 ProSiteProfiles PX domain profile. 658 778 IPR001683 GO:0035091(InterPro)
Cone16ag0095 1070 SUPERFAMILY PX domain 669 776 IPR036871 GO:0035091(InterPro)
Cone16ag0095 1070 CDD PX_domain 665 765 - -
Cone16ag0095 1070 MobiDBLite consensus disorder prediction 1 20 - -
Cone16ag0095 1070 PANTHER PLECKSTRIN HOMOLOGY DOMAIN CONTAINING PROTEIN 62 1062 IPR051366 -
Cone16ag0095 1070 MobiDBLite consensus disorder prediction 1 17 - -
Cone16ag0095 1070 MobiDBLite consensus disorder prediction 188 220 - -
Cone16ag0095 1070 MobiDBLite consensus disorder prediction 781 800 - -
Cone16ag0095 1070 MobiDBLite consensus disorder prediction 205 220 - -
Cone16ag0095 1070 Gene3D - 647 772 IPR036871 GO:0035091(InterPro)
Cone16ag0095 1070 Pfam PX domain 686 773 IPR001683 GO:0035091(InterPro)
Cone16ag0095 1070 SMART DUF4206_2 860 1067 IPR025258 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone16ag0095 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone16ag0095 Cone-Chr16:529173 Cone2ag0913 Cone-Chr2:34921770 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g766 . . Bda06g00607 . . . . Bma12g01042 . . Cma10g00122 Cma11g00092 Car10g00110 Car11g00084 . . Cpe04g01562 Bhi02g00454 Tan09g2254 . . . . . Cla06g01666 Cam06g1851 Cec06g1903 Cco06g1908 Clacu06g1810 Cmu06g1751 Cre06g2570 Cone2ag0913 Cone16ag0095 . . . . . . . Blo15g00264 . . Bpe07g00845 . . . . Cmo10g00126 Cmo11g00091 . . . . . Cpe18g00847 . . . . . . . . . . . . . . Lsi06g01558 Csa01g00145 Chy02g02584 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0006562 2 2 1 1 1 1 2 1 1 1 1 1 2 1 0 2 1 2 2 1 1 1 1 1 1 1 1 1 2 1 37