Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone16ag0099 ATGGAAGAAACATTTGTTCCCTTTCGTGGGATCAAAAATGACATCAAGGCGAGATTTTTGTGCTATAAACAAGATTGGAGAAGCGGTTTCCAATCGGGAATCAGGATTTTGGCTCCTACTACATACATATTCTTTGCCTCGGCTATTCCGGTTATATCTTTTGGAGAGCAACTTGAAAGAAATACTTATGGAACTTTAACTGCGGTTCAAACTCTAGCTTCAACGGCACTTTGTGGAGTTATCCACTCGCTTATCGGAGGTCAACCACTTCTCATCCTCGGAGTAGCAGAGCCCACTGTGTTGATGTATACATTTATGTTCAACTTTGCTAAAGACAGAAAGGATTTGGGACAAGAACTCTTCTTAGCCTGGACAGGATGGGTCTGTGTTTGGACAGCCATCTTGCTCTTCTTGCTTGCAATTTTGGGTGCTTGTTCGATAATTAATCGGTTTACACGCCTTGCTGGTGAATTGTTCGGTCTCCTTATTGCAATACTTTTTATGCAGCAAGCAATACGAGGAGCCGTGGAGGAGTTTGGGATACCCCAGAGAGAAAATCTGAATCAAGCTGCATTAGAACCTTCTTGGCGATTTGGCAATGGAATGTTCGCATTGGTTCTATCCTTTGGCCTTCTTATAACGGCTCTAAGAAGCCGTAAAGCACGATCTTGGCGGTATGGGACCGATTATGGAGTTCCACTTATGGTGCTATTATGGACTGCTATATCTTACATTCCAGTTAATGATGTTCCAAGAGGAATTCCAAGGCGCCTTTTTAGTCCGAATCCATGGTCACCTGGAGCTTATTCTAACTGGACTGTTATAAAGGAAATGTTGAATGTACCTCCATTGTATATAGTTGGAGCGTTTATACCGGCCACTATGATAGCCGTGCTTTACTACTTTGATCACAGTGTGGCCTCTCAGCTTTCTCAACAGAAAGAGTTCAATTTGAAAAAACCGGCTTCCTATCATTACGACCTTCTTCTCTTGGGTTTTCTTGTTATAATATGTGGGCTTATCGGCATCCCACCTTCAAACGGCGTAATTCCACAATCTCCAATGCATACAAAAAGCTTAGCGACTCTTAAACATCAACTTATGCGCAATAAACTTGTCATCACGGCACGAAAAAACATCCGTAGAAACTCAAGCTTGACTCAATTATACCGGAGCATGGAAGAAGCATATTATGGAATGCAAACTCCCCTTGTGTACCAAATGCCCCCTGCTCTGAGGTTGAAAGAGCTAAAAGAATCAACAACTCAGTTAGCTTCAAGTACGGGGTACAATGATGCACCTGTTGATGAGACCATTTTTGACGTGGATAAAGACATAGATGACCTTTTACCTGTTGAAGTTAAAGAACAACGGGTCAGCAATCTACTTCAGTCATTGATGGTGGGTTGTTGTGTTGCTGCCATGCCTCTTTTGAAGAAGATCCCAACTTCAGTTCTTTGGGGATACTTTGCTTTCATGGCGATTGAAAGCTTGCCCGGAAACCAATTTTGGGAGAGGATTTTGTTGCTTTTCACTGCTCCGGGCCGAAGATACAAGGGTACTATTTCCACTTTTGATCATGCTTCTCGTACCTGTTCGTCAATATTTTCTTTCCAAGTTCTTCAAGGGCCCGCATCTTCAAGATCTCGATGCAGCCGAATACGAAGAAACCACTGCACTTGCCTTCAATTCATCATCCTTTGA 1704 42.72 MEETFVPFRGIKNDIKARFLCYKQDWRSGFQSGIRILAPTTYIFFASAIPVISFGEQLERNTYGTLTAVQTLASTALCGVIHSLIGGQPLLILGVAEPTVLMYTFMFNFAKDRKDLGQELFLAWTGWVCVWTAILLFLLAILGACSIINRFTRLAGELFGLLIAILFMQQAIRGAVEEFGIPQRENLNQAALEPSWRFGNGMFALVLSFGLLITALRSRKARSWRYGTDYGVPLMVLLWTAISYIPVNDVPRGIPRRLFSPNPWSPGAYSNWTVIKEMLNVPPLYIVGAFIPATMIAVLYYFDHSVASQLSQQKEFNLKKPASYHYDLLLLGFLVIICGLIGIPPSNGVIPQSPMHTKSLATLKHQLMRNKLVITARKNIRRNSSLTQLYRSMEEAYYGMQTPLVYQMPPALRLKELKESTTQLASSTGYNDAPVDETIFDVDKDIDDLLPVEVKEQRVSNLLQSLMVGCCVAAMPLLKKIPTSVLWGYFAFMAIESLPGNQFWERILLLFTAPGRRYKGTISTFDHASRTCSSIFSFQVLQGPASSRSRCSRIRRNHCTCLQFIIL 567
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 553672 558924 - Conep16aG0010100.1 Cone16ag0099 454533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone16ag0099 567 Gene3D Helical hairpin bin 18 60 - -
Cone16ag0099 567 PANTHER ANION EXCHANGE PROTEIN 4 516 IPR003020 GO:0005452(InterPro)|GO:0005886(PANTHER)|GO:0006820(InterPro)|GO:0016020(InterPro)|GO:0022857(PANTHER)|GO:0050801(PANTHER)|GO:0055085(PANTHER)
Cone16ag0099 567 Pfam HCO3- transporter integral membrane domain 452 513 IPR011531 GO:0006820(InterPro)|GO:0016020(InterPro)
Cone16ag0099 567 Pfam HCO3- transporter integral membrane domain 7 179 IPR011531 GO:0006820(InterPro)|GO:0016020(InterPro)
Cone16ag0099 567 Pfam HCO3- transporter integral membrane domain 228 365 IPR011531 GO:0006820(InterPro)|GO:0016020(InterPro)
Cone16ag0099 567 FunFam probable boron transporter 2 18 60 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone16ag0099 Cone-Chr16:553672 Cone18ag0762 Cone-Chr18:4291387 1.39e-315 dispersed
Cone16ag0099 Cone-Chr16:553672 Cone2ag0909 Cone-Chr2:34900850 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone16ag0099 K24194 - mdm:103424506 932.939