Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone16ag0125 ATGGTGGTCTTTGATTTTGATGCTGTTCTTCTTCTTCACCAAATTCACCCCTTAGATTTGCTGAATTTTGAGCCCGACATGTCGCAGAAGAGAAACCCAGATAATGCCAAAGCTCGATTCGATGGGAATAGTTCAGAAGATAAGCGTAGAAGGAGGGTCCTCACTTTCAAAAATGCCGTATCGGAGGTAATGCGCTTGCAAAGGATTCAAAATTTGTTGGAGCCCATGCTTCGGAAAGTGGTCCGGGAAGAAGTCGATCTTGCGCTGAGAAAGCATTTAACCAGCATGAAACAGAATGATGAAACTGAAGGGAAAGAAGCGCACTTTTCCGAGTTCAGAAGTTTAGAGCTGAAATTCAGCAACAGCCTCTCTCTTCCGATATTTACTGGAGCTCAAATCAATGGGGTAGATGGGTCAGACTTGAAAGTATCTTTGATCGATGCTCTTACTGGGAAAATTGTTGAGTTTGGAGCTAAAGCTTCTTCTAAGGTGGAGATTGTAGTACTCGAGGGTGATTTTGATGGTGATGAGAACAGAAACTGGACTGTTGAAGAGTTTAAGGGTAATATTTTGCGGGAGAGAGAAGGGAAGAAGCCGCTTCTAATGGGAGATGAGTTTCTGAGTCTTAAAGAGGGGATTGGTTTGGTAGGTGAGATTTCTTTTACGGATAATTCCAGCTGGACTAGGAGCCGTAGATTTAGGCTTGGAGCAAGAGTTGTGGAAGATAACTTGAATGGAATCAGAGTGAAAGAAGCAAAGACAGAGCCATTTGTTGTGAAGGATCATCGTGGAGAATTGTACAAGAAGCATCATCCGCCGTCTCTTTGTGATGAAGTGTGGAGGTTAGAGAAAATTGGTAAAGATGGAGCTTTTCATAAGCGTTTGTGCATGGAGAAGATCACAACTGTTAAGGACTTTCTGATTCAACTCTTTAGACACCCCATTCGACTCCGAAATATCCTTGGCACAGGTATGTCTGCTAAGATGTGGGAAGTCACCGTGGAGCATGCTCGGACATGTGTACTTGATAAGGCTATGCTGTACTTGTACTACTATCCTCAAGGTTCCGATCAGAAAACAGGAGTAGTGTTTGATATTGTCAGCCAAGTCATGGGATTATATCTTGATTCTCATTATGTTTCTGTAGACAAGCTCTCAGAAACGGAGAAGGCCGATGCGGAAAACATGGTTATCTCAGCATCTCAAAATTGGGAAGAAGTGGTCCCATTTGATCACCCGACCTCTAATATTATCACCTCTTCTGACCCTACCGATGCTCTTTACCACTCAAACTTGGCCCAATCTGATGGTCCATACGGATCCAAGATTTTATCTACTCATAGGATCAGTGGATTTGATTATACACATTCAAACCCATTTTCTCCTGATATAATCTCATCAATGTACTCCCTTGGAAATCTCGGATCCAGTCTAGATGATTATACTTACCAAAATGTTGACTCCTATCCCAATTCAGGCTTCCAAGGCCAACCAAGCAGCAACTCTTTGATCTGTGTTTCCGAATCCTTGAACCAAACTTTCTATGCCGAGGACCATTTACAATATCTTGAATCCGACCTTCAGTGTGAAAACTCGAACTATGAACCACAAGCCAGCCTCCAAAACCATCCAACTGCTAAGAGGAGATGGAAGAAGGTGTTTAATGTGGTTAATGTGCTCAAATGGTTCTTAGTACCGAGCCACATGACGAAGAAAACTTGA 1722 42.68 MVVFDFDAVLLLHQIHPLDLLNFEPDMSQKRNPDNAKARFDGNSSEDKRRRRVLTFKNAVSEVMRLQRIQNLLEPMLRKVVREEVDLALRKHLTSMKQNDETEGKEAHFSEFRSLELKFSNSLSLPIFTGAQINGVDGSDLKVSLIDALTGKIVEFGAKASSKVEIVVLEGDFDGDENRNWTVEEFKGNILREREGKKPLLMGDEFLSLKEGIGLVGEISFTDNSSWTRSRRFRLGARVVEDNLNGIRVKEAKTEPFVVKDHRGELYKKHHPPSLCDEVWRLEKIGKDGAFHKRLCMEKITTVKDFLIQLFRHPIRLRNILGTGMSAKMWEVTVEHARTCVLDKAMLYLYYYPQGSDQKTGVVFDIVSQVMGLYLDSHYVSVDKLSETEKADAENMVISASQNWEEVVPFDHPTSNIITSSDPTDALYHSNLAQSDGPYGSKILSTHRISGFDYTHSNPFSPDIISSMYSLGNLGSSLDDYTYQNVDSYPNSGFQGQPSSNSLICVSESLNQTFYAEDHLQYLESDLQCENSNYEPQASLQNHPTAKRRWKKVFNVVNVLKWFLVPSHMTKKT 573
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 706271 710267 - Conep16aG0012700.1 Cone16ag0125 454559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone16ag0125 573 Pfam Calmodulin binding protein-like N-terminal domain 115 262 IPR046831 -
Cone16ag0125 573 Pfam Calmodulin binding protein central domain 275 340 IPR046830 -
Cone16ag0125 573 PANTHER OS02G0177800 PROTEIN 47 521 IPR012416 GO:0003700(PANTHER)|GO:0005516(InterPro)|GO:0005634(PANTHER)|GO:0043565(PANTHER)|GO:0080142(PANTHER)
Cone16ag0125 573 Pfam Calmodulin binding protein C-terminal domain 347 409 IPR046829 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone16ag0125 Cone-Chr16:706271 Cone16ag0372 Cone-Chr16:6107067 4.41E-110 dispersed
Cone13ag0122 Cone-Chr13:717559 Cone16ag0125 Cone-Chr16:706271 1.56E-139 wgd
Cone16ag0125 Cone-Chr16:706271 Cone19ag0124 Cone-Chr19:690718 5.33E-159 wgd
Cone16ag0125 Cone-Chr16:706271 Cone2ag0885 Cone-Chr2:34752469 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone16ag0125 - - - 0.0