Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone16ag0126 ATGGCTTTCCCTTTACTTGTTCTTCTCTTCCTCACAGTCCCCTTCTCATCAAAATCGCAACCACTCTCCCTTGATTACTACAGCAAAACATGTCCTGATTTCCAGAAGATCATCCGAGAAACCGTCCATATAAAACAAACTGCCAGCCCCGTCACAGCCGCGGGCACTCTCCGTCTCTTCTTCCATGACTGCATGGTTGAAGGTTGTGATGCCTCTGTACTTATCACCTCCAATGCCTTCCACAACTCCACCGAACGAGACCATGAGATCAATCACTCCCTCCCTGGCGATGCTTTTGACGTTCTTGTCCGAGCCAAAACGGCCCTAGAACTGACATGCCCTGGTGTCATCTCCTGCTCGGACGTATTAGCTCAGGCCACTAGGGACCTCATTACAATGGTCGGTGGTCCGTTTTACAAAGTCCCTCTGGGTCGTAAAGATGCATTGGCTTCACACTCATTACCTGTCGAGAGCAATCTACCAAGAGTGAATCAGAGTGTTGACAATATGATTAAGCTTTTCGAATCGAAAGGGTTCAGCGTGAAAGATTTGGTGGCTTTATCTGGCGGACATACGATTGGATTTTCACACTGTAAAGAGTTTGCAGATCGTTTGTTTCATTACAACAAGACTACACAAACTGATCCTGAAATGTACCCTTCTTATGCTTATGGGTTGAAGAAATTGTGTGCAAATTACCTAAATGATTCAGGACTTGCAGCTTTTAATGATATCATGACTCCCGGAAAGTTCGATAACCTGTATTTTCAGAATATTCTCAAGGGATTGGGGCTTTTAACTTCAGATCATGTACTTGGAAAGGATACGAGAACAAGACCGCTTGTTGAGCTATATGCAGCAAACCAGACAGCATTCTTCAACGACTTTACCGCGGCCATGGAGAAGCTCAGTGTGCTGGGGGTGAAGACAGGTGATAAAGGTGAGGTGAGAAGGAAGTGTGATGTCTTCAATTCACTGAAACCTCAAAACAAAGAGTTGTAA 1002 45.11 MAFPLLVLLFLTVPFSSKSQPLSLDYYSKTCPDFQKIIRETVHIKQTASPVTAAGTLRLFFHDCMVEGCDASVLITSNAFHNSTERDHEINHSLPGDAFDVLVRAKTALELTCPGVISCSDVLAQATRDLITMVGGPFYKVPLGRKDALASHSLPVESNLPRVNQSVDNMIKLFESKGFSVKDLVALSGGHTIGFSHCKEFADRLFHYNKTTQTDPEMYPSYAYGLKKLCANYLNDSGLAAFNDIMTPGKFDNLYFQNILKGLGLLTSDHVLGKDTRTRPLVELYAANQTAFFNDFTAAMEKLSVLGVKTGDKGEVRRKCDVFNSLKPQNKEL 333
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 712587 713588 + Conep16aG0012800.1 Cone16ag0126 454560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone16ag0126 333 ProSitePatterns Peroxidases active site signature. 53 64 IPR019794 GO:0004601(InterPro)
Cone16ag0126 333 ProSitePatterns Peroxidases proximal heme-ligand signature. 183 193 IPR019793 -
Cone16ag0126 333 ProSiteProfiles Plant heme peroxidase family profile. 21 324 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone16ag0126 333 FunFam Peroxidase 25 172 - -
Cone16ag0126 333 PANTHER - 7 324 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone16ag0126 333 PRINTS Plant peroxidase signature 31 50 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone16ag0126 333 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone16ag0126 333 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone16ag0126 333 PRINTS Plant peroxidase signature 298 311 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone16ag0126 333 PRINTS Plant peroxidase signature 182 194 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone16ag0126 333 PRINTS Plant peroxidase signature 55 75 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone16ag0126 333 PRINTS Plant peroxidase signature 242 257 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone16ag0126 333 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone16ag0126 333 PRINTS Plant peroxidase signature 258 275 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone16ag0126 333 SUPERFAMILY Heme-dependent peroxidases 22 324 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone16ag0126 333 FunFam Peroxidase 161 303 - -
Cone16ag0126 333 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone16ag0126 333 PRINTS Haem peroxidase superfamily signature 244 259 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone16ag0126 333 PRINTS Haem peroxidase superfamily signature 183 198 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone16ag0126 333 PRINTS Haem peroxidase superfamily signature 53 67 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone16ag0126 333 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone16ag0126 333 CDD secretory_peroxidase 22 323 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cone16ag0126 333 Gene3D Peroxidase, domain 2 161 303 - -
Cone16ag0126 333 Gene3D - 25 324 - -
Cone16ag0126 333 Pfam Peroxidase 39 288 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone16ag0126 Cone-Chr16:712587 Cone4ag1856 Cone-Chr4:13321633 1.95E-89 dispersed
Cone13ag0121 Cone-Chr13:713201 Cone16ag0126 Cone-Chr16:712587 1.19E-168 wgd
Cone16ag0126 Cone-Chr16:712587 Cone16ag0901 Cone-Chr16:9346509 8.37E-129 wgd
Cone16ag0126 Cone-Chr16:712587 Cone18ag1349 Cone-Chr18:9296612 2.85E-27 wgd
Cone16ag0126 Cone-Chr16:712587 Cone19ag0123 Cone-Chr19:688592 3.19E-164 wgd
Cone16ag0126 Cone-Chr16:712587 Cone2ag0152 Cone-Chr2:793258 1.03E-130 wgd
Cone16ag0126 Cone-Chr16:712587 Cone2ag0883 Cone-Chr2:34735984 2.19E-111 wgd
Cone16ag0126 Cone-Chr16:712587 Cone6ag1447 Cone-Chr6:11576611 1.19E-82 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone16ag0126 K00430 - mdm:114825404 457.218