Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone16ag0180 ATGATGAAGAGGTTGAAGAGATATACCGATGAGATAAATCGTTCCGAGTTGGATCCGCATAGTAATTTAAGAGAATCGGACTGGAAATGCGGGTTGAACTCATCGTCGATGAGTATAATGGGTTTCTTTGTAGTGATAATGATGATTCTGTCTGTCATGTTTTCCATCTCTGTCATTCTTAAAGACCCGCCTTCTGATGGTGTTTCTGAATCCCTAGAAGTCAGAGTTCTTCAAGTAAATTCCCAAATTGGTATGAAGGAAGAGCCCTCAAACGCAATCAAAGAACCTGCCAATAAGCTTCTTGACAGCCTTCTTTCAGACAGAATTGATGCAAAATCATGTCTAAGCAGGTACCATCCACTATCACATCTCAAGGATCTAATCCATAGACCCTCTCCTTACCTAATTGCGAAACTGCGGAATTATGAATCTCTACATAAACGGTGTGGACCTTACACCGAATCCTACAACAAAACCCTAGATCACCTCAGATCAAACCATGACCGCGGGTCATCATCGGATTGTAACTACCTTGTTTGGATTTCCTTCAGTGGTTTAGGAAACAGAATACTGACCTTAGCCTCAGCCTTTCTCTATGCTCTTTTAACGAACCGGGTCCTACTTGTGGACCCCGGAACAGACATGCCTGATCTCTTTTGTGAGCCATTTCCGGAAGTTTCTTGGTTTCTTCCTCTGGATTTTCCCTTGAAAGACCAATTCAATAGCTTCAATCAACAGTCCCCACAATGCTATGGAAAAATAATAAAAAATAATATAAACATTACTAATAACCCGAATGAGGCATTTATAATGCGTCCTTCCTTTGTGTATCTCCATCTTGTCCATGATTATGATGATCAAGATAAGCTTTTCTTCTGCGATCAAGAGCAATCCCTTCTCCAGAAAGTACCATGGCTTGTAATGAAAACCGATAACTATTTCATCCCGTCCCTCTTCTTGATACCGTCTTTTGAGGATGAACTTAATAACCTCTTTCCGAATAAAGAAACTGTTTTCCACTTCTTGGGTCGGTATCTTTTCCACCCGACGAATTCCGTTTGGGGACTTATTACAAGATACTATTACACTTATTTAGCAAATGCAGATGAAAAAATGGGGATCCAGATTAGAGTTTTTGATACGGGGCCAGGCCCATTTCAACATGTTTTAGACCAAATCTTAGCTTGTACTTTTACCGAAAAATTACTGCCCAAAATCACCAAAACCCAACATATTATCACTAGCTTGTCCAAGACAAGGAAAACTAAAGCTGTCTTAATGACATCATTAAGTTCCGGATACTTCGAGAAAGTAAGGGACCTGTTTTGGGAACAAGCGACAGTGAATGGAGAGGTGGTTGGGATTTTCCAACCGAGCCATGAAGAGCATCAACAGACACAAAAAGCGAATCATAACCAGAAGGCATGGGCCGAGATGTATTTACTGAGCTTGACTGATATGTTGGTCACGAGCTCTTGGTCTACGTTCGGGTACGTGGCTCAGGGTCTTGGTGGATTGAAGCCGTGGATATTGTATAAGCCTGAGAATAGGACGGCCCCGGATCCACCGTGCCGTAGAGCTATGTCTATGGAGCCGTGCTTCCATGCGCCTCCGTTTTATGATTGCAAAGCTAAGAGAGGGATCGATACGGGTGAGGTTGTGCCTCACGTGAGGCATTGTGAGGATATGAGTTGGGGTCTTAAACTGGTTGATCAGTAA 1719 42.41 MMKRLKRYTDEINRSELDPHSNLRESDWKCGLNSSSMSIMGFFVVIMMILSVMFSISVILKDPPSDGVSESLEVRVLQVNSQIGMKEEPSNAIKEPANKLLDSLLSDRIDAKSCLSRYHPLSHLKDLIHRPSPYLIAKLRNYESLHKRCGPYTESYNKTLDHLRSNHDRGSSSDCNYLVWISFSGLGNRILTLASAFLYALLTNRVLLVDPGTDMPDLFCEPFPEVSWFLPLDFPLKDQFNSFNQQSPQCYGKIIKNNINITNNPNEAFIMRPSFVYLHLVHDYDDQDKLFFCDQEQSLLQKVPWLVMKTDNYFIPSLFLIPSFEDELNNLFPNKETVFHFLGRYLFHPTNSVWGLITRYYYTYLANADEKMGIQIRVFDTGPGPFQHVLDQILACTFTEKLLPKITKTQHIITSLSKTRKTKAVLMTSLSSGYFEKVRDLFWEQATVNGEVVGIFQPSHEEHQQTQKANHNQKAWAEMYLLSLTDMLVTSSWSTFGYVAQGLGGLKPWILYKPENRTAPDPPCRRAMSMEPCFHAPPFYDCKAKRGIDTGEVVPHVRHCEDMSWGLKLVDQ 572
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 1166158 1168973 - Conep16aG0018400.1 Cone16ag0180 454614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone16ag0180 572 Gene3D - 172 288 - -
Cone16ag0180 572 FunFam Galactoside 2-alpha-L-fucosyltransferase 173 224 - -
Cone16ag0180 572 Pfam Xyloglucan fucosyltransferase 86 543 IPR004938 GO:0008107(InterPro)|GO:0016020(InterPro)|GO:0042546(InterPro)
Cone16ag0180 572 PANTHER FUCOSYLTRANSFERASE 2-RELATED 34 571 IPR004938 GO:0005794(PANTHER)|GO:0008107(InterPro)|GO:0008417(PANTHER)|GO:0009969(PANTHER)|GO:0016020(InterPro)|GO:0042546(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone15ag0967 Cone-Chr15:7684974 Cone16ag0180 Cone-Chr16:1166158 1.33E-182 dispersed
Cone16ag0180 Cone-Chr16:1166158 Cone4ag0460 Cone-Chr4:2042425 2.38E-176 dispersed
Cone13ag0938 Cone-Chr13:8115929 Cone16ag0180 Cone-Chr16:1166158 3.68E-188 wgd
Cone16ag0180 Cone-Chr16:1166158 Cone19ag0933 Cone-Chr19:7163228 7.97E-30 wgd
Cone16ag0180 Cone-Chr16:1166158 Cone2ag0834 Cone-Chr2:34356174 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone16ag0180 K13681 - mdm:103455371 816.224