Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone16ag0189 | ATGGCGCTGTTCAGAAGGTTCTTTTACCGGAAGCCGCCGGATCGGCTACTTGAGATCTCTGAGAGGGTCTACGTGTTTGATTGCTGCTTCTCAACGGATGTGCTGGAAGAAGACGAATACAAAGTATACTTGGGTGGCATTGTACCTCAACTGCAGGGCTACTTTCCTGATGCTTCTTTCATGGTGTTTAACTTCAGAGAAGGGGAGAGACGGAGTCAAATTTCAGATATATTGACTGACTATGACATGACAGTTATGGATTATCCTCGGCAATATGAGGGATGTACTCTCCTGCCTTTAGAGATGATCCACCACTTTCTTCGATCAAGTGAAAGCTGGTTGTCTTTGGAGGGGCAACAAAATGTGCTGTTAATGCATTGTGAAAGAGGGGGTTGGCCAGTCCTTGCATTCATGCTTGCTGGTTTATTATTGTACCGAAAACAGTACAGTGGGGAGCAAAAAACTCTTGAAATGGTCTACAAACAAGCTCCGCGGGAACTTCTACATCTTTTGTCTCCTTTAAATCCACAGCCTTCTCAAATGAGATATCTTCAGTATATCTCTAGGAGAAACTTAGGTTCCGCTTGGCCTCCATCTGATACACCTCTATTTTTTGATTGTTTGATACTTAGAGTCCTACCTCTGTTTGAAGGGGGACAAGGATGCAGGCCAGTTATACGAATTTATGGTCAGGACCCCTCAACACCGTCTAATAGAAGTTCAAAGCTTCTGTTTTCATCTTCAAAAACCAAAAAGCATATCCGCCACTATTTACAGGCAGAGTGTATGCTGGTGAAATTTGATATTCGTTGCCGTGTTCAAGGAGATGTTGTGCTTGAGTGCATCCATCTGGATGGAGATCTAGTACGAGAGGAGATGATATTCAGAGTTATGTTTCACACAGCTTTTGTGCAGTCAAATGTTCTGATGTTTAACCGTGATGACGTTGATGTTGTATGGGATGCGAAGGATCAGTTTTCTAAGGACTTTAGAGTAGAGGTACTGTTTTTGGATGCTGATGCTGTTATCCCTAATCTCACCACAGTTGCAACAGATGATGATGGAAATGGGACAGAAAATGCTTCGCCTGAGGAATTTTTTGAGGTGGAAGAGATCTTTAGTAGTATAGTAGATGGACAAGAAGTCAAGGGGGTCTATGATCCTCAAATGGTTCTTGAAAGTGCTGCTAATGATATAGAAGAAAAAGCAGCCTGGAAGGAGGATCGGGCTCCTCCTAAATTTCAAGACTGCACTTCTGCTGATGGGAATCAGAAGGTGATGAAGGCAGACAATGACATTGATGATGCGGTAAAGGATATTACTGTGGATGATGTGAAGTACAAGCTGGAGGAGAGGGACTCTGAACCAGATGCAGTTAAAGATATTATTGTGGACGACGGGGAAAATAAGTCAAATTTAGTTGTATCTGAATGGGGACTTGTAAAAACTGAGGAAGTCATAGATGATTCTGGTGATATATCGTATGAAACAGAAGATAAAGGAAATGGGGAGCACAATTCTTCAGAGAAAATGTTGGAACCAAAGGTTTCACTGAAAAAGTCAAGTGCACAGAAATCGGAAAAACTGTCTTCACAGACGACAAAGAAACAGCCTACATCAACTGTAAAACCAGCAGCTGATTCGACTGTAACGAAGCAAAAGACTAACCAGCAAGAACTTCAGGGGTTTTCAGCAAAATTAGCAAAGCCAAATGCCCCATCTCGGTGGATTCCCTCTAACAAAGGCTCTTACACAAACTCAATGCATGTGGCCTATCCACCGTCAAGATATAATAGTGCACCGGCTGTTCTTGGTAATGCTTCCTCAAAAGATTCTAATTCTCACTCCAAAACAAAGTCTGCTGCCCGTGGACCTTTTGTTTCAATTGACACGGAAAATGAACAAGAAAGTCTGAAAGTTTGCCCTCCTATAACGTCTTCAAATTCTGCACCAGAGCGACTTACTCTTACTCCAGAACCGCAAGTGCCACCAATCCAACAGACGTTAAAACCAGCCCCACCTTCGCCCCCGCCCCCGCCCCCACCCCCTCCGCATCTTTATTCCAACAAGTCTTTATTTATTACCTCCTTCTTCAACTCCAACTCTTCTTCACAAACCTCCCCACCCTTGCAGGTAGATTCAGTGCCTTCACCCCATTCTCTACCACCACCTCCTTTTCCCTCATTCGGTCATGTGGCTTCCAAATATAATGCACCACCTTCGTCGCGATTCACCCCAATGCTATCGACACCATCTTTAGCAGAAACTCTCATGTCACCCCATCCCCCTCCACCCCAACTTTCATCTAGCTGGCAGAATAATGGGAAAGTATTATCTTATCCACCTCCACCTCCACCTCCACCTCCACCTCCACCACTACCCCCACCACCACCACTGCCACCTCCACCACACTCGTCTCTCTTTGGGAGTGCATTAGCTACATCGGAACTAGGTAGAGTTGGGACTCCTTCTCCACCCCCTCCACCACCACCTCCACCACCTCCTCCTATGCATGGGGTTCCCACTCTCCACTTCGCTTCAATGAAAGGGACCACACCTCCTTCCATGCATGGAGCTCCACCTCCGCCACCACCTCCTCCTCGACATGGAGCTCCACCTCCGCCACCGCCTCCTCCTTTATATGGAGGTCCTTTTCCACCACCACCTCCTCCACCTATGCGTGGAGGTCCACCTTCACCACCACCTCCTCCACCTTTGTATGGTGGTCCACCCCCACCGCCGCCTCCACCTTCATATGGAGGTCCACCTCCACCTCCTCCACCTCCGCCGCCTCCGCCTCCTTTTCGAGGAGGCCCACCTCCACCACCACCAGCACCTTCATATGGAGGTCCACCTCCACCGCCACCTCCTCCTTTTCGAGGAGGTGCACCTCCGCCACCGCCTCCTCCTTATGGAGGTCCACCTCCACCACCACCTCCTCCTTTGCATGGAGGTCCACCTCCACCGCCACCTCCTCCGATGCGGGGAGCACCGCCTCCACCTTACGGAGCACCACCGCCACCGCCACCTCCAGGTCGTGGGGCGCCACCGCCACCTCCAGGTCGTGGGGCGCCACCGCCACCTCCTCCGATGTGGGGAGCACCGCCTCCACCTTACGGAGCACCACCGCCACCTCCAGGTCGTGGGGCACCACCTCCACCTCCTCCGATGCAGGGAGCACCGCCTCCACCTTACGGAGCACCACTGCCACCGCCACCGCCACCTCCAGGTCGTGGGGCACCACCTCCACCTCCCCCTGGACCTCGTGCACCTGGACCACCTGCTCCTCCTAGACCCCCAGGTGGTGTTGGTGCTCCTCCGCCTCCTCCCCTGGGTGCTAAAGGAGCAAATGCTGCAGCTGCGGCAGGTAGAGGGCATGGGCTTTCCCGTCCTTCAGGATTTGGAGCTGCTGCAACAGGGCCTCGGCGATCCTCTCTAAAACCTTTACATTGGAGCAAGGTCACTAGGGCATTGCAAGGAAGCTTATGGGAAGAATTGCAAAGATTTGGAGAACCTCAAATTGCACCAGAGTTTGACGTCTCTGAGTTGGAAAGCCTTTTTTCTGCAAATGTCCCTAAACCTGCTGATTCAGGAGGTAAATCGGGAGGCAGAAGGAAGTCAGTTGGATCCAAAACTGATAAAATCCACTTGGTTGACCTAAGAAGAGCAAACAACACTGAAATTATGCTTACAAAAGTTAAGATGCCTCTTCCTGATATGATGGCTGCAGTTCTTGCAATGGATGAGTCAGTATTAGATGTTGATCAAGTGGAAAATCTCATCAAGTTTTGTCCTACGAAGGATGAAATGGACCTTCTCAAGGGATACACTGGTGACAAGGAAAGCCTTGGAAAGTGCGAGCAGTTCTTTTTGGAGTTGATGAAAGTTCCTCGGGTGGAGTCAAAGTTAAGAGTATTTTCCTTCAAGATTCAGTTTGGTTCACAGATTTCAGAATTCAAAAAGAGTTTAAACACCGTTAACTCTGCCTATGAAGAGGTTCGAAATTCGGTCAAATTAAAGGAGATAATGAAGAAAATTTTATATTTGGGGAATACATTGAACCAAGGAACCGCAAGGGGTTCCGCAATTGGTTTCAAGTTGGATAGTCTCTTAAAACTTACTGATACACGTGCTTCTAACAGTAAGATGACGCTAATGCATTATCTTTGCAAGGTCCTTGCATCTAAGACTCCAGCACTTCTCGATTTTCATCTGGACCTACGTAGCCTGGAATTTGCATCAAAGATACAATTGAAGTCCTTGGCAGAAGAAATGCAAGCAATAATTAAGGGACTAGAAAAGGTCAAGCAGGAGTTGATTGCATCCGAAAGTGATGGCCCTGTCTCAGAAGTTTTCCGTAAGACACTGAAAGAATTCGTTACTGTTGCTGAAACAGAGGTGACATCTGTAACAAATCTATATTCTGTGGTGGGTAGAAATGCAGATGCACTTGCACTATATTTTGGAGAGGATCCTGCTCGTTGCCCGTTTGAGCAAGTCACGGTGACGCTTCTGAATTTTGTGAGGATGTTCCGGAAAGCACACGAAGAGAATTGTAAACAAGCTGAATCGGAGAAGAGAAAAGCTGAAAAGGAGGCTGAAATGGAGAAGGCCAAAGGTATTAACCTGACAAGTAAGAGTGCAAAATAG | 4650 | 47.94 | MALFRRFFYRKPPDRLLEISERVYVFDCCFSTDVLEEDEYKVYLGGIVPQLQGYFPDASFMVFNFREGERRSQISDILTDYDMTVMDYPRQYEGCTLLPLEMIHHFLRSSESWLSLEGQQNVLLMHCERGGWPVLAFMLAGLLLYRKQYSGEQKTLEMVYKQAPRELLHLLSPLNPQPSQMRYLQYISRRNLGSAWPPSDTPLFFDCLILRVLPLFEGGQGCRPVIRIYGQDPSTPSNRSSKLLFSSSKTKKHIRHYLQAECMLVKFDIRCRVQGDVVLECIHLDGDLVREEMIFRVMFHTAFVQSNVLMFNRDDVDVVWDAKDQFSKDFRVEVLFLDADAVIPNLTTVATDDDGNGTENASPEEFFEVEEIFSSIVDGQEVKGVYDPQMVLESAANDIEEKAAWKEDRAPPKFQDCTSADGNQKVMKADNDIDDAVKDITVDDVKYKLEERDSEPDAVKDIIVDDGENKSNLVVSEWGLVKTEEVIDDSGDISYETEDKGNGEHNSSEKMLEPKVSLKKSSAQKSEKLSSQTTKKQPTSTVKPAADSTVTKQKTNQQELQGFSAKLAKPNAPSRWIPSNKGSYTNSMHVAYPPSRYNSAPAVLGNASSKDSNSHSKTKSAARGPFVSIDTENEQESLKVCPPITSSNSAPERLTLTPEPQVPPIQQTLKPAPPSPPPPPPPPPHLYSNKSLFITSFFNSNSSSQTSPPLQVDSVPSPHSLPPPPFPSFGHVASKYNAPPSSRFTPMLSTPSLAETLMSPHPPPPQLSSSWQNNGKVLSYPPPPPPPPPPPPLPPPPPLPPPPHSSLFGSALATSELGRVGTPSPPPPPPPPPPPPMHGVPTLHFASMKGTTPPSMHGAPPPPPPPPRHGAPPPPPPPPLYGGPFPPPPPPPMRGGPPSPPPPPPLYGGPPPPPPPPSYGGPPPPPPPPPPPPPFRGGPPPPPPAPSYGGPPPPPPPPFRGGAPPPPPPPYGGPPPPPPPPLHGGPPPPPPPPMRGAPPPPYGAPPPPPPPGRGAPPPPPGRGAPPPPPPMWGAPPPPYGAPPPPPGRGAPPPPPPMQGAPPPPYGAPLPPPPPPPGRGAPPPPPPGPRAPGPPAPPRPPGGVGAPPPPPLGAKGANAAAAAGRGHGLSRPSGFGAAATGPRRSSLKPLHWSKVTRALQGSLWEELQRFGEPQIAPEFDVSELESLFSANVPKPADSGGKSGGRRKSVGSKTDKIHLVDLRRANNTEIMLTKVKMPLPDMMAAVLAMDESVLDVDQVENLIKFCPTKDEMDLLKGYTGDKESLGKCEQFFLELMKVPRVESKLRVFSFKIQFGSQISEFKKSLNTVNSAYEEVRNSVKLKEIMKKILYLGNTLNQGTARGSAIGFKLDSLLKLTDTRASNSKMTLMHYLCKVLASKTPALLDFHLDLRSLEFASKIQLKSLAEEMQAIIKGLEKVKQELIASESDGPVSEVFRKTLKEFVTVAETEVTSVTNLYSVVGRNADALALYFGEDPARCPFEQVTVTLLNFVRMFRKAHEENCKQAESEKRKAEKEAEMEKAKGINLTSKSAK | 1549 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
16 | 1212438 | 1223998 | - | Conep16aG0019300.1 | Cone16ag0189 | 454623 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone16ag0189 | 1549 | Gene3D | - | 205 | 336 | - | - | |
Cone16ag0189 | 1549 | MobiDBLite | consensus disorder prediction | 1189 | 1210 | - | - | |
Cone16ag0189 | 1549 | MobiDBLite | consensus disorder prediction | 689 | 714 | - | - | |
Cone16ag0189 | 1549 | Coils | Coil | 1512 | 1541 | - | - | |
Cone16ag0189 | 1549 | MobiDBLite | consensus disorder prediction | 738 | 756 | - | - | |
Cone16ag0189 | 1549 | MobiDBLite | consensus disorder prediction | 523 | 564 | - | - | |
Cone16ag0189 | 1549 | ProSiteProfiles | Formin homology-2 (FH2) domain profile. | 1136 | 1537 | IPR015425 | - | |
Cone16ag0189 | 1549 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 13 | 188 | IPR029021 | - | |
Cone16ag0189 | 1549 | MobiDBLite | consensus disorder prediction | 601 | 621 | - | - | |
Cone16ag0189 | 1549 | MobiDBLite | consensus disorder prediction | 576 | 593 | - | - | |
Cone16ag0189 | 1549 | SMART | it6_source | 676 | 1547 | IPR015425 | - | |
Cone16ag0189 | 1549 | Coils | Coil | 1418 | 1442 | - | - | |
Cone16ag0189 | 1549 | MobiDBLite | consensus disorder prediction | 855 | 1113 | - | - | |
Cone16ag0189 | 1549 | MobiDBLite | consensus disorder prediction | 664 | 687 | - | - | |
Cone16ag0189 | 1549 | SUPERFAMILY | Formin homology 2 domain (FH2 domain) | 1213 | 1539 | - | - | |
Cone16ag0189 | 1549 | MobiDBLite | consensus disorder prediction | 821 | 840 | - | - | |
Cone16ag0189 | 1549 | MobiDBLite | consensus disorder prediction | 487 | 522 | - | - | |
Cone16ag0189 | 1549 | FunFam | Formin-like protein | 1136 | 1523 | - | - | |
Cone16ag0189 | 1549 | MobiDBLite | consensus disorder prediction | 715 | 729 | - | - | |
Cone16ag0189 | 1549 | MobiDBLite | consensus disorder prediction | 487 | 1144 | - | - | |
Cone16ag0189 | 1549 | Pfam | Formin Homology 2 Domain | 1142 | 1511 | IPR015425 | - | |
Cone16ag0189 | 1549 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 201 | 336 | IPR035892 | - | |
Cone16ag0189 | 1549 | Gene3D | Protein tyrosine phosphatase superfamily | 14 | 204 | IPR029021 | - | |
Cone16ag0189 | 1549 | MobiDBLite | consensus disorder prediction | 630 | 663 | - | - | |
Cone16ag0189 | 1549 | SMART | PTEN_C2_2 | 198 | 338 | IPR014020 | - | |
Cone16ag0189 | 1549 | Gene3D | Formin, FH2 domain | 1138 | 1523 | IPR042201 | - | |
Cone16ag0189 | 1549 | MobiDBLite | consensus disorder prediction | 1519 | 1549 | - | - | |
Cone16ag0189 | 1549 | MobiDBLite | consensus disorder prediction | 778 | 805 | - | - | |
Cone16ag0189 | 1549 | MobiDBLite | consensus disorder prediction | 1519 | 1539 | - | - | |
Cone16ag0189 | 1549 | ProSiteProfiles | C2 tensin-type domain profile. | 200 | 339 | IPR014020 | - | |
Cone16ag0189 | 1549 | PANTHER | FORMIN-J | 1 | 766 | IPR051144 | - | |
Cone16ag0189 | 1549 | Pfam | C2 domain of PTEN tumour-suppressor protein | 199 | 336 | IPR014020 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone15ag0886 | Cone-Chr15:6856989 | Cone16ag0189 | Cone-Chr16:1212438 | 2.24E-129 | dispersed | |
Cone15ag0895 | Cone-Chr15:6973659 | Cone16ag0189 | Cone-Chr16:1212438 | 3.45E-195 | dispersed | |
Cone16ag0189 | Cone-Chr16:1212438 | Cone17ag0984 | Cone-Chr17:7577492 | 6.79E-281 | dispersed | |
Cone13ag0054 | Cone-Chr13:337662 | Cone16ag0189 | Cone-Chr16:1212438 | 0 | wgd | |
Cone16ag0189 | Cone-Chr16:1212438 | Cone2ag0827 | Cone-Chr2:34275656 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone16ag0189 | K28090 | - | csv:101215105 | 912.138 |