Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cone16ag0189 ATGGCGCTGTTCAGAAGGTTCTTTTACCGGAAGCCGCCGGATCGGCTACTTGAGATCTCTGAGAGGGTCTACGTGTTTGATTGCTGCTTCTCAACGGATGTGCTGGAAGAAGACGAATACAAAGTATACTTGGGTGGCATTGTACCTCAACTGCAGGGCTACTTTCCTGATGCTTCTTTCATGGTGTTTAACTTCAGAGAAGGGGAGAGACGGAGTCAAATTTCAGATATATTGACTGACTATGACATGACAGTTATGGATTATCCTCGGCAATATGAGGGATGTACTCTCCTGCCTTTAGAGATGATCCACCACTTTCTTCGATCAAGTGAAAGCTGGTTGTCTTTGGAGGGGCAACAAAATGTGCTGTTAATGCATTGTGAAAGAGGGGGTTGGCCAGTCCTTGCATTCATGCTTGCTGGTTTATTATTGTACCGAAAACAGTACAGTGGGGAGCAAAAAACTCTTGAAATGGTCTACAAACAAGCTCCGCGGGAACTTCTACATCTTTTGTCTCCTTTAAATCCACAGCCTTCTCAAATGAGATATCTTCAGTATATCTCTAGGAGAAACTTAGGTTCCGCTTGGCCTCCATCTGATACACCTCTATTTTTTGATTGTTTGATACTTAGAGTCCTACCTCTGTTTGAAGGGGGACAAGGATGCAGGCCAGTTATACGAATTTATGGTCAGGACCCCTCAACACCGTCTAATAGAAGTTCAAAGCTTCTGTTTTCATCTTCAAAAACCAAAAAGCATATCCGCCACTATTTACAGGCAGAGTGTATGCTGGTGAAATTTGATATTCGTTGCCGTGTTCAAGGAGATGTTGTGCTTGAGTGCATCCATCTGGATGGAGATCTAGTACGAGAGGAGATGATATTCAGAGTTATGTTTCACACAGCTTTTGTGCAGTCAAATGTTCTGATGTTTAACCGTGATGACGTTGATGTTGTATGGGATGCGAAGGATCAGTTTTCTAAGGACTTTAGAGTAGAGGTACTGTTTTTGGATGCTGATGCTGTTATCCCTAATCTCACCACAGTTGCAACAGATGATGATGGAAATGGGACAGAAAATGCTTCGCCTGAGGAATTTTTTGAGGTGGAAGAGATCTTTAGTAGTATAGTAGATGGACAAGAAGTCAAGGGGGTCTATGATCCTCAAATGGTTCTTGAAAGTGCTGCTAATGATATAGAAGAAAAAGCAGCCTGGAAGGAGGATCGGGCTCCTCCTAAATTTCAAGACTGCACTTCTGCTGATGGGAATCAGAAGGTGATGAAGGCAGACAATGACATTGATGATGCGGTAAAGGATATTACTGTGGATGATGTGAAGTACAAGCTGGAGGAGAGGGACTCTGAACCAGATGCAGTTAAAGATATTATTGTGGACGACGGGGAAAATAAGTCAAATTTAGTTGTATCTGAATGGGGACTTGTAAAAACTGAGGAAGTCATAGATGATTCTGGTGATATATCGTATGAAACAGAAGATAAAGGAAATGGGGAGCACAATTCTTCAGAGAAAATGTTGGAACCAAAGGTTTCACTGAAAAAGTCAAGTGCACAGAAATCGGAAAAACTGTCTTCACAGACGACAAAGAAACAGCCTACATCAACTGTAAAACCAGCAGCTGATTCGACTGTAACGAAGCAAAAGACTAACCAGCAAGAACTTCAGGGGTTTTCAGCAAAATTAGCAAAGCCAAATGCCCCATCTCGGTGGATTCCCTCTAACAAAGGCTCTTACACAAACTCAATGCATGTGGCCTATCCACCGTCAAGATATAATAGTGCACCGGCTGTTCTTGGTAATGCTTCCTCAAAAGATTCTAATTCTCACTCCAAAACAAAGTCTGCTGCCCGTGGACCTTTTGTTTCAATTGACACGGAAAATGAACAAGAAAGTCTGAAAGTTTGCCCTCCTATAACGTCTTCAAATTCTGCACCAGAGCGACTTACTCTTACTCCAGAACCGCAAGTGCCACCAATCCAACAGACGTTAAAACCAGCCCCACCTTCGCCCCCGCCCCCGCCCCCACCCCCTCCGCATCTTTATTCCAACAAGTCTTTATTTATTACCTCCTTCTTCAACTCCAACTCTTCTTCACAAACCTCCCCACCCTTGCAGGTAGATTCAGTGCCTTCACCCCATTCTCTACCACCACCTCCTTTTCCCTCATTCGGTCATGTGGCTTCCAAATATAATGCACCACCTTCGTCGCGATTCACCCCAATGCTATCGACACCATCTTTAGCAGAAACTCTCATGTCACCCCATCCCCCTCCACCCCAACTTTCATCTAGCTGGCAGAATAATGGGAAAGTATTATCTTATCCACCTCCACCTCCACCTCCACCTCCACCTCCACCACTACCCCCACCACCACCACTGCCACCTCCACCACACTCGTCTCTCTTTGGGAGTGCATTAGCTACATCGGAACTAGGTAGAGTTGGGACTCCTTCTCCACCCCCTCCACCACCACCTCCACCACCTCCTCCTATGCATGGGGTTCCCACTCTCCACTTCGCTTCAATGAAAGGGACCACACCTCCTTCCATGCATGGAGCTCCACCTCCGCCACCACCTCCTCCTCGACATGGAGCTCCACCTCCGCCACCGCCTCCTCCTTTATATGGAGGTCCTTTTCCACCACCACCTCCTCCACCTATGCGTGGAGGTCCACCTTCACCACCACCTCCTCCACCTTTGTATGGTGGTCCACCCCCACCGCCGCCTCCACCTTCATATGGAGGTCCACCTCCACCTCCTCCACCTCCGCCGCCTCCGCCTCCTTTTCGAGGAGGCCCACCTCCACCACCACCAGCACCTTCATATGGAGGTCCACCTCCACCGCCACCTCCTCCTTTTCGAGGAGGTGCACCTCCGCCACCGCCTCCTCCTTATGGAGGTCCACCTCCACCACCACCTCCTCCTTTGCATGGAGGTCCACCTCCACCGCCACCTCCTCCGATGCGGGGAGCACCGCCTCCACCTTACGGAGCACCACCGCCACCGCCACCTCCAGGTCGTGGGGCGCCACCGCCACCTCCAGGTCGTGGGGCGCCACCGCCACCTCCTCCGATGTGGGGAGCACCGCCTCCACCTTACGGAGCACCACCGCCACCTCCAGGTCGTGGGGCACCACCTCCACCTCCTCCGATGCAGGGAGCACCGCCTCCACCTTACGGAGCACCACTGCCACCGCCACCGCCACCTCCAGGTCGTGGGGCACCACCTCCACCTCCCCCTGGACCTCGTGCACCTGGACCACCTGCTCCTCCTAGACCCCCAGGTGGTGTTGGTGCTCCTCCGCCTCCTCCCCTGGGTGCTAAAGGAGCAAATGCTGCAGCTGCGGCAGGTAGAGGGCATGGGCTTTCCCGTCCTTCAGGATTTGGAGCTGCTGCAACAGGGCCTCGGCGATCCTCTCTAAAACCTTTACATTGGAGCAAGGTCACTAGGGCATTGCAAGGAAGCTTATGGGAAGAATTGCAAAGATTTGGAGAACCTCAAATTGCACCAGAGTTTGACGTCTCTGAGTTGGAAAGCCTTTTTTCTGCAAATGTCCCTAAACCTGCTGATTCAGGAGGTAAATCGGGAGGCAGAAGGAAGTCAGTTGGATCCAAAACTGATAAAATCCACTTGGTTGACCTAAGAAGAGCAAACAACACTGAAATTATGCTTACAAAAGTTAAGATGCCTCTTCCTGATATGATGGCTGCAGTTCTTGCAATGGATGAGTCAGTATTAGATGTTGATCAAGTGGAAAATCTCATCAAGTTTTGTCCTACGAAGGATGAAATGGACCTTCTCAAGGGATACACTGGTGACAAGGAAAGCCTTGGAAAGTGCGAGCAGTTCTTTTTGGAGTTGATGAAAGTTCCTCGGGTGGAGTCAAAGTTAAGAGTATTTTCCTTCAAGATTCAGTTTGGTTCACAGATTTCAGAATTCAAAAAGAGTTTAAACACCGTTAACTCTGCCTATGAAGAGGTTCGAAATTCGGTCAAATTAAAGGAGATAATGAAGAAAATTTTATATTTGGGGAATACATTGAACCAAGGAACCGCAAGGGGTTCCGCAATTGGTTTCAAGTTGGATAGTCTCTTAAAACTTACTGATACACGTGCTTCTAACAGTAAGATGACGCTAATGCATTATCTTTGCAAGGTCCTTGCATCTAAGACTCCAGCACTTCTCGATTTTCATCTGGACCTACGTAGCCTGGAATTTGCATCAAAGATACAATTGAAGTCCTTGGCAGAAGAAATGCAAGCAATAATTAAGGGACTAGAAAAGGTCAAGCAGGAGTTGATTGCATCCGAAAGTGATGGCCCTGTCTCAGAAGTTTTCCGTAAGACACTGAAAGAATTCGTTACTGTTGCTGAAACAGAGGTGACATCTGTAACAAATCTATATTCTGTGGTGGGTAGAAATGCAGATGCACTTGCACTATATTTTGGAGAGGATCCTGCTCGTTGCCCGTTTGAGCAAGTCACGGTGACGCTTCTGAATTTTGTGAGGATGTTCCGGAAAGCACACGAAGAGAATTGTAAACAAGCTGAATCGGAGAAGAGAAAAGCTGAAAAGGAGGCTGAAATGGAGAAGGCCAAAGGTATTAACCTGACAAGTAAGAGTGCAAAATAG 4650 47.94 MALFRRFFYRKPPDRLLEISERVYVFDCCFSTDVLEEDEYKVYLGGIVPQLQGYFPDASFMVFNFREGERRSQISDILTDYDMTVMDYPRQYEGCTLLPLEMIHHFLRSSESWLSLEGQQNVLLMHCERGGWPVLAFMLAGLLLYRKQYSGEQKTLEMVYKQAPRELLHLLSPLNPQPSQMRYLQYISRRNLGSAWPPSDTPLFFDCLILRVLPLFEGGQGCRPVIRIYGQDPSTPSNRSSKLLFSSSKTKKHIRHYLQAECMLVKFDIRCRVQGDVVLECIHLDGDLVREEMIFRVMFHTAFVQSNVLMFNRDDVDVVWDAKDQFSKDFRVEVLFLDADAVIPNLTTVATDDDGNGTENASPEEFFEVEEIFSSIVDGQEVKGVYDPQMVLESAANDIEEKAAWKEDRAPPKFQDCTSADGNQKVMKADNDIDDAVKDITVDDVKYKLEERDSEPDAVKDIIVDDGENKSNLVVSEWGLVKTEEVIDDSGDISYETEDKGNGEHNSSEKMLEPKVSLKKSSAQKSEKLSSQTTKKQPTSTVKPAADSTVTKQKTNQQELQGFSAKLAKPNAPSRWIPSNKGSYTNSMHVAYPPSRYNSAPAVLGNASSKDSNSHSKTKSAARGPFVSIDTENEQESLKVCPPITSSNSAPERLTLTPEPQVPPIQQTLKPAPPSPPPPPPPPPHLYSNKSLFITSFFNSNSSSQTSPPLQVDSVPSPHSLPPPPFPSFGHVASKYNAPPSSRFTPMLSTPSLAETLMSPHPPPPQLSSSWQNNGKVLSYPPPPPPPPPPPPLPPPPPLPPPPHSSLFGSALATSELGRVGTPSPPPPPPPPPPPPMHGVPTLHFASMKGTTPPSMHGAPPPPPPPPRHGAPPPPPPPPLYGGPFPPPPPPPMRGGPPSPPPPPPLYGGPPPPPPPPSYGGPPPPPPPPPPPPPFRGGPPPPPPAPSYGGPPPPPPPPFRGGAPPPPPPPYGGPPPPPPPPLHGGPPPPPPPPMRGAPPPPYGAPPPPPPPGRGAPPPPPGRGAPPPPPPMWGAPPPPYGAPPPPPGRGAPPPPPPMQGAPPPPYGAPLPPPPPPPGRGAPPPPPPGPRAPGPPAPPRPPGGVGAPPPPPLGAKGANAAAAAGRGHGLSRPSGFGAAATGPRRSSLKPLHWSKVTRALQGSLWEELQRFGEPQIAPEFDVSELESLFSANVPKPADSGGKSGGRRKSVGSKTDKIHLVDLRRANNTEIMLTKVKMPLPDMMAAVLAMDESVLDVDQVENLIKFCPTKDEMDLLKGYTGDKESLGKCEQFFLELMKVPRVESKLRVFSFKIQFGSQISEFKKSLNTVNSAYEEVRNSVKLKEIMKKILYLGNTLNQGTARGSAIGFKLDSLLKLTDTRASNSKMTLMHYLCKVLASKTPALLDFHLDLRSLEFASKIQLKSLAEEMQAIIKGLEKVKQELIASESDGPVSEVFRKTLKEFVTVAETEVTSVTNLYSVVGRNADALALYFGEDPARCPFEQVTVTLLNFVRMFRKAHEENCKQAESEKRKAEKEAEMEKAKGINLTSKSAK 1549
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
16 1212438 1223998 - Conep16aG0019300.1 Cone16ag0189 454623
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cone16ag0189 1549 Gene3D - 205 336 - -
Cone16ag0189 1549 MobiDBLite consensus disorder prediction 1189 1210 - -
Cone16ag0189 1549 MobiDBLite consensus disorder prediction 689 714 - -
Cone16ag0189 1549 Coils Coil 1512 1541 - -
Cone16ag0189 1549 MobiDBLite consensus disorder prediction 738 756 - -
Cone16ag0189 1549 MobiDBLite consensus disorder prediction 523 564 - -
Cone16ag0189 1549 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1136 1537 IPR015425 -
Cone16ag0189 1549 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 13 188 IPR029021 -
Cone16ag0189 1549 MobiDBLite consensus disorder prediction 601 621 - -
Cone16ag0189 1549 MobiDBLite consensus disorder prediction 576 593 - -
Cone16ag0189 1549 SMART it6_source 676 1547 IPR015425 -
Cone16ag0189 1549 Coils Coil 1418 1442 - -
Cone16ag0189 1549 MobiDBLite consensus disorder prediction 855 1113 - -
Cone16ag0189 1549 MobiDBLite consensus disorder prediction 664 687 - -
Cone16ag0189 1549 SUPERFAMILY Formin homology 2 domain (FH2 domain) 1213 1539 - -
Cone16ag0189 1549 MobiDBLite consensus disorder prediction 821 840 - -
Cone16ag0189 1549 MobiDBLite consensus disorder prediction 487 522 - -
Cone16ag0189 1549 FunFam Formin-like protein 1136 1523 - -
Cone16ag0189 1549 MobiDBLite consensus disorder prediction 715 729 - -
Cone16ag0189 1549 MobiDBLite consensus disorder prediction 487 1144 - -
Cone16ag0189 1549 Pfam Formin Homology 2 Domain 1142 1511 IPR015425 -
Cone16ag0189 1549 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 201 336 IPR035892 -
Cone16ag0189 1549 Gene3D Protein tyrosine phosphatase superfamily 14 204 IPR029021 -
Cone16ag0189 1549 MobiDBLite consensus disorder prediction 630 663 - -
Cone16ag0189 1549 SMART PTEN_C2_2 198 338 IPR014020 -
Cone16ag0189 1549 Gene3D Formin, FH2 domain 1138 1523 IPR042201 -
Cone16ag0189 1549 MobiDBLite consensus disorder prediction 1519 1549 - -
Cone16ag0189 1549 MobiDBLite consensus disorder prediction 778 805 - -
Cone16ag0189 1549 MobiDBLite consensus disorder prediction 1519 1539 - -
Cone16ag0189 1549 ProSiteProfiles C2 tensin-type domain profile. 200 339 IPR014020 -
Cone16ag0189 1549 PANTHER FORMIN-J 1 766 IPR051144 -
Cone16ag0189 1549 Pfam C2 domain of PTEN tumour-suppressor protein 199 336 IPR014020 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone15ag0886 Cone-Chr15:6856989 Cone16ag0189 Cone-Chr16:1212438 2.24E-129 dispersed
Cone15ag0895 Cone-Chr15:6973659 Cone16ag0189 Cone-Chr16:1212438 3.45E-195 dispersed
Cone16ag0189 Cone-Chr16:1212438 Cone17ag0984 Cone-Chr17:7577492 6.79E-281 dispersed
Cone13ag0054 Cone-Chr13:337662 Cone16ag0189 Cone-Chr16:1212438 0 wgd
Cone16ag0189 Cone-Chr16:1212438 Cone2ag0827 Cone-Chr2:34275656 0 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone16ag0189 K28090 - csv:101215105 912.138