Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone16ag0218 | ATGTCGTCCGAACATGACTCTCTGTTCCTTTCACAAACAGCTTCTCCGTCATCTCCAATCAGCTTAGAACTCTTATTCTGTCTGTTACTCTTCATCTCTCTTTTCACATTATGTTTCTTTCCTGGAGGTCTTGCTTGGGCCCTTGCAAAAAACCAAGTTAAAAATAATAAACTTCGAGCCAAAACAACCATTCCTGGTCCTTCAGGCTTACCTATTCTAGGCCTCGTTCATGCTTTTCTAAGCTCTTTAACCCATGAAGTTCTTGCTATGCTCTGTCAAGCCTATAAAGCCAAATCATTAATGTCATTCTCAATTGGGTATACTCGTTTCGTTATCACAAGCCACCCTGACACGGCCAAGGAGCTCTTGAGTAGCTCCGCTTTTGCTGATCGACCGATTAAGGAATCAGCTTATGAGCTTTTGTTTCATAGAGCAATGGGTTTTGCACCCTTTGGTGAGTATTGGAGGAATTTGAGGAGAATTTCAGCTACCCATTTGTTTAGTCCTAAGAAAATTGCATTTTTTGGGGAGATGAGGCAAAAAGTTGGGTTAAAAATGGTGGAGGAAATGAAGGGTTTGATGGAGAGAAATGGTACGATTGAGGCGAGGAAAGTGTTGCATTTTGGGTCATTGAATAATGTCATGTTTATTGTGTTTGGAAAAAGGTATGAGTTTGGTGAGAGTAGGGATAGGAGCGGTCATGACGACGAGAGTTATCGCGAGCTTGAGAGTTTGGTTAGTGAAGGGTATGATTTGCTTGGGAGGTTTAATTGGAGTGATCATTTTCCCCTTTTGGGTTGGTTGGATTTGCAAGGTGTGAGGAAAAGGTGTAATAATTTGGTGTCAAAAGTTGATGTTTTTGTTGGGAATATTATAGAGGAGCATAGGATCATGAAAAAAAGGGTTGTGGACAATAATACTAGAGAAGTGGTGGGTGATCATCAGAATGAGAGCTCTAATGGTGATTTTGTTGATGCTTTGCTTGATTTGGACCAAGAATCTAGACTCAGTGACTCTGATATGGTTGCTGTTTGCTGGGAAATGATCTTCAGGGGTACTGATACAGTGGCAATTCTCCTAGAGTGGATTCTAGCAAGAATGGTTCTCCACCAGGACATCCAAGCCAAAGTCCAGTCCCAAATTGATTCTTTGATCCAGAAAGATAACCGTCCAGTTTCTGATTCAGACCTAAAAAACCTACCTTATCTCAGTGCAGTAGTAAAAGAAAGTCTAAGAATGCACCCACCTGGACCCCTTCTTTCGTGGGCCAGGCTTGCAATCCATGACACTGAATTAGCCCAACACTTCGTCCCGGCGGGCACAACTGCCATGGTTAATATGTGGGCCATAACTCACGATGAACAATTCTGGCCCGACCCACTTAAATTCAAACCGGAACGATTCATAAAGGAGGATGTGGCAATTATGGGGTCGGATCTCAGATTGGCTCCTTTCGGTTCTGGTAGAAGGGTCTGTCCCGGAAAAGCAATGGGTTTAGCAACTGTTGAGCTTTGGCTTGCTCTATTGCTCCAAAGCTTCAAATGGCTTCCTTTTAATGACATTGATGGTGCTGTAGATTTGTCTGGATGCTTGAAGCTTTCTTTGGAGATGAAGCACCCTTTAGTTTGCAAGATCGCCCCTAGGGTTATCGCTTAA | 1656 | 42.87 | MSSEHDSLFLSQTASPSSPISLELLFCLLLFISLFTLCFFPGGLAWALAKNQVKNNKLRAKTTIPGPSGLPILGLVHAFLSSLTHEVLAMLCQAYKAKSLMSFSIGYTRFVITSHPDTAKELLSSSAFADRPIKESAYELLFHRAMGFAPFGEYWRNLRRISATHLFSPKKIAFFGEMRQKVGLKMVEEMKGLMERNGTIEARKVLHFGSLNNVMFIVFGKRYEFGESRDRSGHDDESYRELESLVSEGYDLLGRFNWSDHFPLLGWLDLQGVRKRCNNLVSKVDVFVGNIIEEHRIMKKRVVDNNTREVVGDHQNESSNGDFVDALLDLDQESRLSDSDMVAVCWEMIFRGTDTVAILLEWILARMVLHQDIQAKVQSQIDSLIQKDNRPVSDSDLKNLPYLSAVVKESLRMHPPGPLLSWARLAIHDTELAQHFVPAGTTAMVNMWAITHDEQFWPDPLKFKPERFIKEDVAIMGSDLRLAPFGSGRRVCPGKAMGLATVELWLALLLQSFKWLPFNDIDGAVDLSGCLKLSLEMKHPLVCKIAPRVIA | 551 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 16 | 1516225 | 1518121 | + | Conep16aG0022200.1 | Cone16ag0218 | 454652 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone16ag0218 | 551 | SUPERFAMILY | Cytochrome P450 | 64 | 548 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone16ag0218 | 551 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 485 | 494 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cone16ag0218 | 551 | Pfam | Cytochrome P450 | 65 | 518 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone16ag0218 | 551 | Gene3D | Cytochrome P450 | 48 | 545 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone16ag0218 | 551 | CDD | CYP78 | 96 | 541 | - | - | |
| Cone16ag0218 | 551 | PRINTS | E-class P450 group I signature | 492 | 515 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone16ag0218 | 551 | PRINTS | E-class P450 group I signature | 482 | 492 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone16ag0218 | 551 | PRINTS | E-class P450 group I signature | 446 | 470 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone16ag0218 | 551 | PRINTS | E-class P450 group I signature | 209 | 227 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone16ag0218 | 551 | PRINTS | E-class P450 group I signature | 340 | 357 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone16ag0218 | 551 | PRINTS | E-class P450 group I signature | 404 | 422 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone16ag0218 | 551 | PRINTS | E-class P450 group I signature | 360 | 386 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone16ag0218 | 551 | PANTHER | CYTOCHROME P450 78A7-RELATED | 20 | 544 | IPR051996 | - | |
| Cone16ag0218 | 551 | PRINTS | P450 superfamily signature | 483 | 492 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone16ag0218 | 551 | PRINTS | P450 superfamily signature | 351 | 368 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone16ag0218 | 551 | PRINTS | P450 superfamily signature | 405 | 416 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone16ag0218 | 551 | FunFam | Cytochrome P450 78A5 | 56 | 548 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone12ag0813 | Cone-Chr12:7411071 | Cone16ag0218 | Cone-Chr16:1516225 | 1.45E-181 | dispersed | |
| Cone14ag0450 | Cone-Chr14:2111433 | Cone16ag0218 | Cone-Chr16:1516225 | 6.28E-163 | dispersed | |
| Cone16ag0218 | Cone-Chr16:1516225 | Cone6ag0519 | Cone-Chr6:2591809 | 3.72E-240 | dispersed | |
| Cone16ag0218 | Cone-Chr16:1516225 | Cone9ag0534 | Cone-Chr9:2552386 | 1.51E-239 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone16ag0218 | K20619 | - | rcu:8284407 | 722.235 |