Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone16ag0225 ATGGCAACAAAATCTGAGAAATTTTCAGCAGACTTTATGATGGCAGGGGTTGCTGCAGTAATATCAAAAAGTGCAGCTGCTCCAATTGAAAGGGTGAAGCTTTTGTTGCAAAACCAAGGTGAGATGATAAAGAGAGGAAGACTCGACAGGCCTTATATGGGCATTAGTGATTGTTTTAGAAGGATCTTGAGAGAGGAAGGTCTTTTATCTCTATGGAGAGGAAATCAGGCCAACGTTATTCGCTATTTCCCTACCCAGGCTTTCAACTTTGCATTCAAAGGTTACTTCAAGAGTATTTTCGGACGGTCAAAAGAAAGAGATGGATACATAAAGTGGTTTGCTGGAAATGTGGCTTCAGGCAGTGCAGCAGGGGCCACTACATCTCTATTTCTATATCATCTTGACTATGCTCGGACCCGGCTAGGCACAGATGCATTGTCAAGTTCCGGTAATGGTCAACGCCAATTTAAGGGATTGGTTGATGTGTATAGCAAAACCTTATCAAGTGATGGAATGATTGGTTTGTACCGAGGATTTAGTGTTTCTATCTTGGGAATAACTCTCTATAGAGGCATGTACTTTGGGATCTATGACACAATGAAGCCGCTTGTTTTGGTTGGTCCTTTAGAGGGGAATTTCTTTGCTAGTTTCTTATTGGGTTGGAGCGTCACAACTGTCTCTGGGGTCTGTGCTTATCCTTTTGATACTGTTCGACGAAGAATGATGCTTACCTCTGGACAAACCTTGAAATATCGAAACCCGATGCATGCATTTCATGAGATCATTCGCTTTGAAGGTTTCAATGCACTTTTCCGAGGAGTCACTGCAAATATGCTTCTTGGAGTTGCTGGGGCTGGAGTTCTTGCTTGTTATGATGAGCTCCAGCGAGTCGCAACTAAACATGGTTATGGTTCTGAGCCATATCATAGAGTCTCTAAGTACTGA 945 42.65 MATKSEKFSADFMMAGVAAVISKSAAAPIERVKLLLQNQGEMIKRGRLDRPYMGISDCFRRILREEGLLSLWRGNQANVIRYFPTQAFNFAFKGYFKSIFGRSKERDGYIKWFAGNVASGSAAGATTSLFLYHLDYARTRLGTDALSSSGNGQRQFKGLVDVYSKTLSSDGMIGLYRGFSVSILGITLYRGMYFGIYDTMKPLVLVGPLEGNFFASFLLGWSVTTVSGVCAYPFDTVRRRMMLTSGQTLKYRNPMHAFHEIIRFEGFNALFRGVTANMLLGVAGAGVLACYDELQRVATKHGYGSEPYHRVSKY 314
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 1653918 1658788 - Conep16aG0022900.1 Cone16ag0225 454659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone16ag0225 314 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 6 305 IPR002113 GO:0005471(PANTHER)|GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro)
Cone16ag0225 314 ProSiteProfiles Solute carrier (Solcar) repeat profile. 111 203 IPR018108 -
Cone16ag0225 314 Pfam Mitochondrial carrier protein 212 301 IPR018108 -
Cone16ag0225 314 Pfam Mitochondrial carrier protein 6 103 IPR018108 -
Cone16ag0225 314 Pfam Mitochondrial carrier protein 113 203 IPR018108 -
Cone16ag0225 314 ProSiteProfiles Solute carrier (Solcar) repeat profile. 211 297 IPR018108 -
Cone16ag0225 314 PRINTS Adenine nucleotide translocator signature 52 73 IPR002113 GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro)
Cone16ag0225 314 PRINTS Adenine nucleotide translocator signature 111 124 IPR002113 GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro)
Cone16ag0225 314 PRINTS Adenine nucleotide translocator signature 8 20 IPR002113 GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro)
Cone16ag0225 314 PRINTS Adenine nucleotide translocator signature 85 97 IPR002113 GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro)
Cone16ag0225 314 PRINTS Adenine nucleotide translocator signature 216 232 IPR002113 GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro)
Cone16ag0225 314 SUPERFAMILY Mitochondrial carrier 6 293 IPR023395 -
Cone16ag0225 314 Gene3D Mitochondrial carrier domain 9 304 IPR023395 -
Cone16ag0225 314 PRINTS Mitochondrial carrier protein signature 74 94 IPR002067 GO:0055085(InterPro)
Cone16ag0225 314 PRINTS Mitochondrial carrier protein signature 126 144 IPR002067 GO:0055085(InterPro)
Cone16ag0225 314 PRINTS Mitochondrial carrier protein signature 176 194 IPR002067 GO:0055085(InterPro)
Cone16ag0225 314 PRINTS Mitochondrial carrier protein signature 11 24 IPR002067 GO:0055085(InterPro)
Cone16ag0225 314 PRINTS Mitochondrial carrier protein signature 24 38 IPR002067 GO:0055085(InterPro)
Cone16ag0225 314 PRINTS Mitochondrial carrier protein signature 220 242 IPR002067 GO:0055085(InterPro)
Cone16ag0225 314 ProSiteProfiles Solute carrier (Solcar) repeat profile. 6 99 IPR018108 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone16ag0225 Cone-Chr16:1653918 Cone18ag0355 Cone-Chr18:1720121 2.70E-134 dispersed
Cone16ag0225 Cone-Chr16:1653918 Cone8ag1517 Cone-Chr8:11444879 4.10E-137 transposed
Cone16ag0225 Cone-Chr16:1653918 Cone10ag1356 Cone-Chr10:10575099 4.10E-137 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone16ag0225 K05863 - mdm:103424568 515.383