Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone16ag0244 | ATGGAGCAATACTTTCTCCTCACGCTCTTGCTGCTCTTTGTTTCCTTCATCTCTCTCTCTCTCTTCATCCTCTTCTACAATCACAAATCCCAATTCTCCGGGGACAACACACCGCCTGGACAGATTGGTTACCCGATGATCGGAGAGAGTCTTCAATTCTTGTCAGCCGGATGGAAAGGTCATCCCGAGAAGTTCATATTCGACCGCATGACCAAGTTTAGCACCGACATCTTCAAGACCTCCATTTTCGGTGTCCCTACAGCTGTGTTTTGCGGCTCGGCGAACAACAAGTTCTTGTTTTCCAACGAGAACAAGCTGGTCACTGCCTGGTGGCCCGACTCTGTGAACAAGGTCTTCCCTTCTTCTCAGCAAACTTCCTCAAAAGATGAAGCCAGGAAGATGAGAAAGCTTCTTCCACAGTTCCTTAAACCCGAAGCCTTGCAACGATACATCGGTATCATGGACACCATATGTCAGCGTCACTTTGCTGATGGCTGGGAGAATAAGAATGAAGTCGTCGTCTACTCCCTGGCAAAGAACTACACTTTCTGGCTAGCTTGCCGGTTGTTTGCGAGCATCGAGGATCCGAACCACGTCGCAAAGTTTTCGGACCCATTCCAACTGATTGCCTCTGGGATCTTCTCAATCCCGGTTGACTTGCCTGGGACACCGTTCAACAAGGCCATCAAGGCCTCAAAATTCATAAGGAAGGAGCTTAGTAATATCATAAAGCAAAGGAAGAGTGATCTTGCAGACGGTAAGGCATCGCCTACACAAGATATCTTGTCTCACATGCTGTTGACGTGCGATGAGAACGGGCAGTACATGAATGAATTGGACATAGCTGATAAGATTCTTGGACTCTTGATTGGTGGCCATGACACTGCCAGTATCTCCTGCAGCTTCATTGTTAAGTACCTCGGCGAGCTTCCTCACATCTATGAGGGCGTCTACAAGGAAGTTATTTTGCAAAAAAAATCGGTCTACGACCTTTCGAAATTTAATTCGAAAGCCCCTGGCGAGTTGTTGAATTGGGATGACATTCAGAAAATGAAGTATTCATGGAACGTAGCTTGTGAAGTATTGAGACTAGCACCTCCCCTTCAAGGTGCCTTCAGAGAAGCCATTAATGATTTCATCTTCAACGGCTTCCACATTCCAAATGGCTGGAAGATATACTGGAGTGCCAACTCGACTCACAAAAATGCAGACTACTTCCCTGATCCAATGAAGTTCGACCCATCTAGATTTGAAGGGAAAGGTCCAGCCCCATACACATTTGTTCCTTTCGGTGGTGGGCCCAGGATGTGCCCAGGCAAAGAGTATGCTCGATTGGAAATCCTTGTTTTCATGCACCATCTAGTCAGGAGGTTTAAGTGGGAAAAGGTGCTGCCCGATGAGAAAATTGTAGTTAATCCTATGCCTATTCCAGCTCAGGGCCTTCCTATTCGCCTTTATCCTCACAAAGCTTGA | 1473 | 46.84 | MEQYFLLTLLLLFVSFISLSLFILFYNHKSQFSGDNTPPGQIGYPMIGESLQFLSAGWKGHPEKFIFDRMTKFSTDIFKTSIFGVPTAVFCGSANNKFLFSNENKLVTAWWPDSVNKVFPSSQQTSSKDEARKMRKLLPQFLKPEALQRYIGIMDTICQRHFADGWENKNEVVVYSLAKNYTFWLACRLFASIEDPNHVAKFSDPFQLIASGIFSIPVDLPGTPFNKAIKASKFIRKELSNIIKQRKSDLADGKASPTQDILSHMLLTCDENGQYMNELDIADKILGLLIGGHDTASISCSFIVKYLGELPHIYEGVYKEVILQKKSVYDLSKFNSKAPGELLNWDDIQKMKYSWNVACEVLRLAPPLQGAFREAINDFIFNGFHIPNGWKIYWSANSTHKNADYFPDPMKFDPSRFEGKGPAPYTFVPFGGGPRMCPGKEYARLEILVFMHHLVRRFKWEKVLPDEKIVVNPMPIPAQGLPIRLYPHKA | 490 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 16 | 2670239 | 2672832 | + | Conep16aG0259100.1 | Cone16ag0244 | 454678 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone16ag0244 | 490 | Pfam | Cytochrome P450 | 38 | 462 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone16ag0244 | 490 | PRINTS | E-class P450 group I signature | 280 | 297 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone16ag0244 | 490 | PRINTS | E-class P450 group I signature | 437 | 460 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone16ag0244 | 490 | PRINTS | E-class P450 group I signature | 395 | 419 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone16ag0244 | 490 | PRINTS | E-class P450 group I signature | 427 | 437 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone16ag0244 | 490 | Gene3D | Cytochrome P450 | 27 | 487 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone16ag0244 | 490 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 430 | 439 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cone16ag0244 | 490 | PANTHER | CYTOCHROME P450 26 | 37 | 465 | - | GO:0004497(PANTHER)|GO:0016125(PANTHER)|GO:0016491(PANTHER) | |
| Cone16ag0244 | 490 | PRINTS | P450 superfamily signature | 437 | 448 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone16ag0244 | 490 | PRINTS | P450 superfamily signature | 291 | 308 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone16ag0244 | 490 | PRINTS | P450 superfamily signature | 428 | 437 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone16ag0244 | 490 | PRINTS | P450 superfamily signature | 356 | 367 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone16ag0244 | 490 | FunFam | Taxadiene 5-alpha hydroxylase | 28 | 488 | - | - | |
| Cone16ag0244 | 490 | CDD | CYP90-like | 69 | 487 | - | - | |
| Cone16ag0244 | 490 | SUPERFAMILY | Cytochrome P450 | 32 | 487 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone16ag0244 | Cone-Chr16:2670239 | Cone2ag0650 | Cone-Chr2:31349288 | 0 | dispersed | |
| Cone16ag0244 | Cone-Chr16:2670239 | Cone9ag0072 | Cone-Chr9:328904 | 2.00E-109 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone16ag0244 | K20667 | - | rcu:8282886 | 780.4 |