Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone16ag0266 ATGTTGGAAGGTGGTCCAAAATTTTCCGGAATGATCGATTTAAATACCAGGCATGATTATGATTTATCGCAAGGCTTTTACCATAAACTTGGTGAGGGTACAAACATGTCCATCGACAGTTTTGCAAGCTTGCAAACAAGCAATGATGGAGGGTCTGTTGCAATGTCTGTAGATAACAGTAGTGTGGGATCAAATGATTCCCATACTCGCATATTGAACCACCAAGGCTTGAGGCAAAGATCAAATGATAACTACACTGTCCAGCAGAGTGTGAATCGTAGAGGAAGAGTCACACATGCTTTGAGCAATGATGCACTGGCTCGAGCTCTATTCGACAAAAATAACCCCACTAGAGGGCTTGAAAACTTTGAGCAATGGACTCTCAATTTGGGAAAGCTTAACATGGGGGAGGCTTTTGCTCAAGGTGCCTTTGGAAAACTTTACAGAGGTACTTACAATGGTGAGGATGTTGCTATAAAGATCTTGGAGAGGCCGGAAAATGACCTGGAAAAGGCTCAGTTGATGGAGCAACAATTTCAGCAGGAGGTTAAGATGCTTGCTACATTGAAGCACCCAAACATAGTTCGATTTATTGGGGCATGTCATAAGCCCATGGTTTGGTGCATTGTTACTGAGTATGCAAGGGGTGGATCAGTGAGGCAGTTCTTGGCAAACCGACGGAATCGAACCGTACCACTGAAATTAGCTGTGAAACAAGCTTTGGATGTTGCTAGGGGGATGGAATTTGTTCATGGGTTTGGATTGATCCATAGGGACTTAAAATCCGACAACCTCTTGATATTTGCTGATAAGTCCATAAAGATTGCTGATTTTGGGGTTGCGAGGATTGAGGTGGAGACTGAAGGAATGACTCCTGAGACTGGAACATACCGGTGGATGGCTCCGGAAATGCTATCAAGGTGCTTTCAGGTGGTGGGTGCACTAGACAGACGGGTTTCTTTGAAATAA 969 44.07 MLEGGPKFSGMIDLNTRHDYDLSQGFYHKLGEGTNMSIDSFASLQTSNDGGSVAMSVDNSSVGSNDSHTRILNHQGLRQRSNDNYTVQQSVNRRGRVTHALSNDALARALFDKNNPTRGLENFEQWTLNLGKLNMGEAFAQGAFGKLYRGTYNGEDVAIKILERPENDLEKAQLMEQQFQQEVKMLATLKHPNIVRFIGACHKPMVWCIVTEYARGGSVRQFLANRRNRTVPLKLAVKQALDVARGMEFVHGFGLIHRDLKSDNLLIFADKSIKIADFGVARIEVETEGMTPETGTYRWMAPEMLSRCFQVVGALDRRVSLK 322
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 2951918 2960731 - Conep16aG0261500.1 Cone16ag0266 454700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone16ag0266 322 SMART serkin_6 133 320 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone16ag0266 322 FunFam Serine/threonine-protein kinase isoform 1 123 215 - -
Cone16ag0266 322 Pfam Protein kinase domain 141 307 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone16ag0266 322 ProSitePatterns Serine/Threonine protein kinases active-site signature. 255 267 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone16ag0266 322 Gene3D Transferase(Phosphotransferase) domain 1 209 316 - -
Cone16ag0266 322 PANTHER SERINE-THREONINE PROTEIN KINASE 66 307 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
Cone16ag0266 322 ProSiteProfiles Protein kinase domain profile. 133 322 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone16ag0266 322 Gene3D Phosphorylase Kinase; domain 1 124 208 - -
Cone16ag0266 322 SUPERFAMILY Protein kinase-like (PK-like) 121 308 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone16ag0266 Cone-Chr16:2951918 Cone2ag0700 Cone-Chr2:32593335 1.10E-206 dispersed
Cone16ag0263 Cone-Chr16:2923665 Cone16ag0266 Cone-Chr16:2951918 2.46E-207 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82200 None None None None Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone16ag0266 - - - 0.0