Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone16ag0292 ATGGCGTCAGATTCTTCTTCTGAAGGACTGGCTCTTGATCCTTCAAAATTGAGCAAGTTGACGGTAGAGCAGAAGAAAGAACTTGTATACGAAATATCAGATCGGCCGAATGATGCTTCTGAAGTTTTGCAATCATGGAGCCGTCAGGATATTCTCCAAATCCTGTGTGCAGAAATGGGAAAAGAAAGGAAGTATACTGGAATGACAAAACTAAAGATGGTAGAGAATCTTCTCAGGATTGTATCCGAAAAGAAATTAGGGGTTCTTGAGGTATCAGGGAAGACTGAACTGCAGTCTTCTCCTTCATCTGGCGAGAGAACTATCCAAAGATTGAAGAAAACCGATCATTCATCTTTGTTACAAGTTCCTATGAGCAACTTTTCTGTGAATAATGCTGGTACTAATTCTGGTAGTACAGCGTACTGCAAAAACTCTGCCTGTAGAGCTACTTTAAATTGGAGTGATAAGTTTTGCAGGAGGTGTTCATGTTGCATTTGTCACAAGTATGATGACAATAAGGATCCAAGCCTATGGTTAATCTGTAGCTCAGAGCCTCCATTTGAAGGTGATTCATGTGGGATGTCTTGTCATCTTGAGTGTGCATTAAATGATGAAAGTTCAGGTATTGGACGAGGAGAAAAGCCAAAAAGAATGGAGGGGAGCTTTTGTTGTGTATCTTGTGGGAAGCCAAATGATTTGCTCGGATGCTGGAGAAAACAACTTATGCAGGCAAAGGATACCAGAAAGGTGGATGTACTCTGTTATCGCATCTCTTTATGCCAAAAGCTTCTCAATGGAACAAAAAAGTACAAAAATATTCATGATATTGTAGATGAAGCCATGAAGAACCTTGAAAGCGAAGTTGGCCCTTTTTCCGGTTTTTCTTTTAAAATGGGTAGAGGTATAGTGAACAGGCTGTCTTCAGGACCAGAGGTCCAGAAACTTTGCGCTTTTGCCATTGAATCTCTAGATTCGGTGATTTCCGAAAAACTGTCCCTTCACATACCTGATCCTATCCTTAAAGATTTAGAACCAATTGTTCAAGACATAATTGGATTTGAAGATGTCCAAGCAACATCCCTTACTGTTGTTTTCCTATATAAAGAAACTGCATCGGATCAAAAAATAATTAGAGGCACCTTATGGCATAGAAAGGCAAGTGATACAGAATACCCAGATGAACCAACTTGTACATTATTTGCATCAAATGCTCGGTTTGTTGTAAGAGGGCTAGTCCCCTCTACACCTTATCTATTCAAAACAGTTCTTTTGGACGGGTCAAGAGAATTGGGAATGTTCCAAGTTGAGTCCTCAACAGGCAGCAGCGATGAAGAGGCTGAAAGAAGTCGAAGTCAAAGTCAAAGTCCAGCTACTAACTCTAGTGACCTTTCTAATTCTAACCCTTCCTCAGTTGAAGATGAAACATACACTCCTGCTCCTCCTTATTGTGATAATATGGGTATTGAAGTAAAAAACACAGATGGAAAAGGGGCTATTGATGCTTTAAAGCACTCGGAAGAGGATATGAATAATACAGATAATGGTTCGGATGATAATTCCCTTGTTCAGACAGGAATGGAATGTGTTCCATTTATTAACGGCAGTAGCTCTCAAGCTGTCTTGCCCATTACTCCTTGCAAGTTGGAAGTAGTAGTAGCCAAGGATGATGGTCTTGACAATGGTGGGACTCAAAAAGGAGGAGGTGGACCCCATGATGGTAGCACGTCGAAGAAGAAGAAGAGGAGAAAAGGAGAAGAAGATGATGATGATGATAATGAGTGTGGGCCCGCAAATGGTATTTCCTCAGATGGTGATTTGGAGTATTATGTGAAGACAATAAGGTGGTTAGAATGTGAGGGACATATAGATCGGAATTTCAGACAGCAGTTTCTGACATGGTATAGCTTGAGGGCGACCCCACAAGAAGTGCGGATCGTGAAGGTGTTTGTGGATACTTTTATGGAAGACCCGGCATCTCTTGCTGAACAACTTATAGATACGTTTTCGGATTGCGTTTTGACCGTTAGAAAACGGTCTCATTTACCATCTGGGTTGTGCATGAAGCTTTGGCATTGA 2076 41.09 MASDSSSEGLALDPSKLSKLTVEQKKELVYEISDRPNDASEVLQSWSRQDILQILCAEMGKERKYTGMTKLKMVENLLRIVSEKKLGVLEVSGKTELQSSPSSGERTIQRLKKTDHSSLLQVPMSNFSVNNAGTNSGSTAYCKNSACRATLNWSDKFCRRCSCCICHKYDDNKDPSLWLICSSEPPFEGDSCGMSCHLECALNDESSGIGRGEKPKRMEGSFCCVSCGKPNDLLGCWRKQLMQAKDTRKVDVLCYRISLCQKLLNGTKKYKNIHDIVDEAMKNLESEVGPFSGFSFKMGRGIVNRLSSGPEVQKLCAFAIESLDSVISEKLSLHIPDPILKDLEPIVQDIIGFEDVQATSLTVVFLYKETASDQKIIRGTLWHRKASDTEYPDEPTCTLFASNARFVVRGLVPSTPYLFKTVLLDGSRELGMFQVESSTGSSDEEAERSRSQSQSPATNSSDLSNSNPSSVEDETYTPAPPYCDNMGIEVKNTDGKGAIDALKHSEEDMNNTDNGSDDNSLVQTGMECVPFINGSSSQAVLPITPCKLEVVVAKDDGLDNGGTQKGGGGPHDGSTSKKKKRRKGEEDDDDDNECGPANGISSDGDLEYYVKTIRWLECEGHIDRNFRQQFLTWYSLRATPQEVRIVKVFVDTFMEDPASLAEQLIDTFSDCVLTVRKRSHLPSGLCMKLWH 691
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 3324905 3328865 + Conep16aG0264100.1 Cone16ag0292 454726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone16ag0292 691 MobiDBLite consensus disorder prediction 558 599 - -
Cone16ag0292 691 Pfam PHD - plant homeodomain finger protein 142 261 IPR032881 -
Cone16ag0292 691 MobiDBLite consensus disorder prediction 435 490 - -
Cone16ag0292 691 MobiDBLite consensus disorder prediction 451 474 - -
Cone16ag0292 691 CDD PHD_VIN3_plant 162 227 - -
Cone16ag0292 691 PANTHER VIN3-LIKE PROTEIN 2-RELATED 13 477 IPR044514 GO:0010048(InterPro)|GO:0040029(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone16ag0292 Cone-Chr16:3324905 Cone17ag1181 Cone-Chr17:8664975 8.53E-125 dispersed
Cone16ag0292 Cone-Chr16:3324905 Cone2ag0714 Cone-Chr2:32768870 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone16ag0292 - - - 0.0