Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone16ag0303 ATGGCCGATTTCCGGACCTCGACTCACCGAGCCAAGTGGATCTTCTCTCCTCAAGAGCTGGTTGACAAGTATAGAGCTGCTAACCAGGGAGCTATCCAAATGCTGGAGAAGTATGGAGCAACGTTAATGGACATACATGAAGATGGGTCGTTGTCATATCCTGATCCTCGTATTAATTCAAAAGATAATGCTGATAAACGTCCAAAACCTATAAATATTGATGAGGAACAATTTATGCGAGTATTTTACGAAAATAAACTTCAAGAAGTATGCAACAACTTTCACTTTCCTCATAAAATTCAGGCAACAGCTCTGATATATTTCAAAAGATTCTATCTACAATGGTCAGTTATGCAGCACAATCCCAAAAATATTATGTTAACCTGTATATATGCAGCTTGTAAAATAGAAGAAAATCATGTCTCGGCAGAGGAGCTTGGTAAGGGAATCTCCCAAGATCATCAAATGATTCTCAATTATGAGATGATAGTTTATCAGAGTTTAGAATTCGATCTTATTGTGTATGCACCATATCGATCGATTGAAGGCTTCATAAATGATGCAGAGGAATTCTGCCAAGCAAGTGATGACCAGCTTCAGACGCTAAAGAGAACTGCAGTGACTGAAGTAGATAAAATTATGCTTACAGATGCACCACTTCTATTCCCTCCTGGTCAGTTGGCATTGGCTGCTTTGCGTAGTTCAAATGAAGTTCACAGAGTTGTTGACTTTGAGAGATACCTAAGGAGCATTCTATCTCGCCAGAATTCTTCACATTCTATTTCTGACCTCATTGATTCTCTAAATTCAATCGACTCTTGGGTGAGCAGATATAAGTTCCCTTCCGAAAAAGACTTGAAGCACATCAACAGGAAACTGAAATCTTGTTGGGGTCTTAACCCGCAGGATGAGAGTAAGAAAAGGGAGAAGAAATCAAAGCACAAATCAAAGAAGAATTCCAGTGAAATGCATGATATGCCTCATCAGTAA 990 39.09 MADFRTSTHRAKWIFSPQELVDKYRAANQGAIQMLEKYGATLMDIHEDGSLSYPDPRINSKDNADKRPKPINIDEEQFMRVFYENKLQEVCNNFHFPHKIQATALIYFKRFYLQWSVMQHNPKNIMLTCIYAACKIEENHVSAEELGKGISQDHQMILNYEMIVYQSLEFDLIVYAPYRSIEGFINDAEEFCQASDDQLQTLKRTAVTEVDKIMLTDAPLLFPPGQLALAALRSSNEVHRVVDFERYLRSILSRQNSSHSISDLIDSLNSIDSWVSRYKFPSEKDLKHINRKLKSCWGLNPQDESKKREKKSKHKSKKNSSEMHDMPHQ 329
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 3502077 3505503 + Conep16aG0265200.1 Cone16ag0303 454737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone16ag0303 329 CDD CYCLIN_AcCycH_rpt1 3 172 - -
Cone16ag0303 329 FunFam cyclin-H1-1 61 173 - -
Cone16ag0303 329 SUPERFAMILY Cyclin-like 177 299 IPR036915 -
Cone16ag0303 329 SMART cyclin_7 85 166 IPR013763 -
Cone16ag0303 329 Gene3D - 61 173 - -
Cone16ag0303 329 FunFam Cyclin h 175 277 - -
Cone16ag0303 329 SUPERFAMILY Cyclin-like 46 174 IPR036915 -
Cone16ag0303 329 Gene3D - 175 277 - -
Cone16ag0303 329 PANTHER CYCLIN 9 321 IPR043198 GO:0000079(PANTHER)|GO:0005634(PANTHER)|GO:0006357(InterPro)|GO:0006357(PANTHER)|GO:0016538(InterPro)|GO:0016538(PANTHER)|GO:0070816(PANTHER)|GO:0070985(PANTHER)
Cone16ag0303 329 CDD CYCLIN_AcCycH_rpt2 175 296 - -
Cone16ag0303 329 Pfam Cyclin, N-terminal domain 76 172 IPR006671 -
Cone16ag0303 329 MobiDBLite consensus disorder prediction 297 329 - -
Cone16ag0303 329 Pfam Cyclin C-terminal domain 177 273 IPR031658 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone16ag0303 Cone-Chr16:3502077 Cone5ag0033 Cone-Chr5:201237 1.47E-65 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone16ag0303 K06634 - mdm:103423557 504.212