Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone16ag0324 | ATGAGTAATTTCAAGGAATCGCCGTACCGGAGACGGCGAGATTTGGAGGCCGGAAGTACAGAGGAAGAGGAGTCGTCGTCGGATCCTTTCCATATCACCAGAACGAAGCATGCTTCGGTCGAGCGTCTCAGACGCTGGAGACAAGCTGCACTCGTGCTTAATGCTTCTCGACGATTTCGTTATACGCTAGACTTGAAAAAAGAGGAAGAGAAGAAAGAAGCATTAATGAAGATCAGATCTCATGTCCAAGTCATAAGGGCTGCACATCGCTTCATAGAACTTGGGGTTAACTTGAATGGAAATGTGCCACCCGCGATTTGCAAAGGTGAATCTATTGGACAGGAGCAACTGGCGTCCCTTATGAAAGATCATAATTTATCAGTTCTGGAGGAATATGGAGGGGTTAAAGGGCTCGCTGATATGTTACAAACCAATATAGAGAAGGGGATCAGTGGAGATGATACTGATTTACAGAAACGGAAAGATATGTATGGGTCAAATACCTATCCTCAGAAAAAAGGACGGAGCTTTTGGAGGTTTCTTTGGGAAGCTTGGCAAGATCTCACTTTGATTATATTGATGATAGCTGCAGTGGCTTCTTTAGCGCTGGGCATAAAAACTGAGGGTATCAGGGAAGGTTGGTATGATGGTGGAAGCATTGCCTTTGCAGTTATTCTTGTAATTGTTGTTACAGCTATTAGTGATTACAGGCAATCTCTTCAGTTTCAGAATTTAAATGAGGAAAAGAGAAACATACGTTTGGAGGTCGTTAGGGGTGGTAGAAGAGTGGAGATTTCTATATATGACATTGTGGTCGGTGATGTTGTGCCCCTGAACATTGGCGATCAGGTTCCTGCTGATGGTATCTTAATTCTTGGTCACTCTCTTGCAATTGATGAGTCAAGCATGACTGGAGAGAGCAAGATTGTTAATAAAAATGCAAAGCAACCTTTTCTGATGTCTGGATGCAAAGTAGCTGATGGTAGTGGCACTATGCTGGTCACATGTGTTGGGATAAATACTGAATGGGGATTGCTTATGGCTAGTATTTCAGAAGACACCGGTGAGGAAACACCTTTGCAGGTGCGTCTAAATGGCGTTGCGACTTTTATTGGTATTGTTGGGCTTACTGTTGCTTTTGTTGTCTTGGTTGTCCTCATAGTCAGATACTTCACTGGCCACACAACAAATGCAGAGGGAGATCCTCAGTTTATTGCAGGCAAAACAACGGTTGGCAAAGCCATTGATGGAGTCATTAAGATCATTACTATTGCGGTCACCATTGTAGTAGTTGCAGTACCTGAAGGTCTACCATTAGCTGTCACCTTAACTCTTGCATACTCAATGAGAAAGATGATGGCGGATAAGGCATTGGTGCGAAGACTTTCTGCATGTGAGACAATGGGCTCTGCAACAACAATTTGTAGCGACAAGACTGGAACATTAACTTTGAACCAGATGGCCATTGTTGAGGCATATGCCGGTGGAAAGAAAGTTGAACATCCAGAGAACAAGTCAGAGCTCTCTCAAATGCTGTTGTCTCTACTCGTTGAAGGAATTGCGAATAATACAAATGGAAGTGTTTATTTGGCTGAGGGAGGTGAAGATGTCGAGATTTCTGGTTCACCGACAGAAAAAGCAATCCTCTCCTGGGGCCTTAAGCTGGGAATGAATTTTGAAACTGACCGATCAGAATCTTCCATTCTCCATGTTTTTCCTTTCAACTCAGAGAAAAAGCGAGGTGGTGTTGCAGTACAACAGCCTGACTCTCAAGTTCACATACACTGGAAGGGTGCTGCTGAATTAGTCCTAGCTTCATGCTCTCAGTACTTGGCCACAGACGATTGCTTGGCTGCATTGGATGAAGACAAGAAAATGTATTTCAAGAAAGCAATCGAGGATATGGCTTCTCGTAGTCTGCGTTGTGTAGCCATCGCATACAGAACTTGTGAAATGGAAAACGTTCCAGCTGATGATGAACAATTAAACAAGTGGGCACTACCAGAGGATGACCTCGTCTTGTTGGCCATTGTTGGTATAAAGGACCCTTGTCGACCTGGAGTGAAGGATGCTGTGCAGCTTTGCCAGAATGCGGGTATTAAGGTACGAATGGTCACAGGTGACAACCTGCAGACTGCTAGAGCTATCGCTTTAGAATGTGGCATACTTGGTTCAGATGCAAATGCCAATGAACCAAATCTTATTGAAGGGAGAGTCTTTCGTGAACTGTCTGATACAAGGCGAGAAGAAATTGCTGAACATATATCTGTGATGGGACGGTCCTCTCCCAATGATAAGCTTCTGCTTGTGCAAGCATTAAGAAGGAGGAAACATGTTGTTGCTGTTACTGGAGATGGAACAAATGATGCTCCTGCATTACATGAGGCAGACATTGGTCTTGCAATGGGTATCGCAGGGACTGAAGTCGCGAAGGAAAGCTCTGATATTATTATATTGGATGACAATTTTGCTTCTGTAGTTAAGGTTGTCAGGTGGGGCCGATCTGTGTATGCAAATATCCAGAAGTTCATTCAGTTTCAGTTGACGGTTAACGCTGCTGCTCTTGTCATAAATGTTGTGGCCGCAATTTCTTCAGGCGATGTTCCACTAAATGCAGTGCAGCTTCTTTGGGTTAATCTTATCATGGATACTCTTGGAGCATTGGCATTGGCAACCGAACCACCAACAGATCACCTGATGCACAGGCCGCCAGTTGGTAGAAGGGAACCTCTCATTACAAATATCATGTGGAGGAATTTGCTGATACAGGCCATGTATCAAGTGACAGTTCTTCTAGTCCTCAATTTTCGAGGGACAAGCTTATTGCACTTAGAGGGTAACACCGGTGCACAGAACAAAGTCAAGAATACACTTATATTCAACGCTTTTGTTCTCTGTCAAGTTTTTAACGAGTTCAATGCTCGCAAACCAGATGAAAAGAACATATTCAAAGGTCTTAGCAAAAATAAACTCTTTATTGGAATAGTGGGATTTACTCTTGTGTTACAGGTCATTCTCATCGAGTTTTCAGGAAAGTTTACTGATACCGTCAAGCTCAACTGGAAGCAGTGGTTGATTTGCATTATTATTGGTTTTATCAGTTGGCCTTTATGTCTTGTGGGAAAACTGATACCTGTTCCAGAAACTCCTATGTTTGAGTTCATTACAAAACGGTTTCATAGACAGAGGAATCCTCAAGAGATGGAAGCAGCTTAA | 3216 | 43.22 | MSNFKESPYRRRRDLEAGSTEEEESSSDPFHITRTKHASVERLRRWRQAALVLNASRRFRYTLDLKKEEEKKEALMKIRSHVQVIRAAHRFIELGVNLNGNVPPAICKGESIGQEQLASLMKDHNLSVLEEYGGVKGLADMLQTNIEKGISGDDTDLQKRKDMYGSNTYPQKKGRSFWRFLWEAWQDLTLIILMIAAVASLALGIKTEGIREGWYDGGSIAFAVILVIVVTAISDYRQSLQFQNLNEEKRNIRLEVVRGGRRVEISIYDIVVGDVVPLNIGDQVPADGILILGHSLAIDESSMTGESKIVNKNAKQPFLMSGCKVADGSGTMLVTCVGINTEWGLLMASISEDTGEETPLQVRLNGVATFIGIVGLTVAFVVLVVLIVRYFTGHTTNAEGDPQFIAGKTTVGKAIDGVIKIITIAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMAIVEAYAGGKKVEHPENKSELSQMLLSLLVEGIANNTNGSVYLAEGGEDVEISGSPTEKAILSWGLKLGMNFETDRSESSILHVFPFNSEKKRGGVAVQQPDSQVHIHWKGAAELVLASCSQYLATDDCLAALDEDKKMYFKKAIEDMASRSLRCVAIAYRTCEMENVPADDEQLNKWALPEDDLVLLAIVGIKDPCRPGVKDAVQLCQNAGIKVRMVTGDNLQTARAIALECGILGSDANANEPNLIEGRVFRELSDTRREEIAEHISVMGRSSPNDKLLLVQALRRRKHVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNAAALVINVVAAISSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMHRPPVGRREPLITNIMWRNLLIQAMYQVTVLLVLNFRGTSLLHLEGNTGAQNKVKNTLIFNAFVLCQVFNEFNARKPDEKNIFKGLSKNKLFIGIVGFTLVLQVILIEFSGKFTDTVKLNWKQWLICIIIGFISWPLCLVGKLIPVPETPMFEFITKRFHRQRNPQEMEAA | 1071 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
16 | 3989076 | 4006641 | - | Conep16aG0267300.1 | Cone16ag0324 | 454758 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone16ag0324 | 1071 | FunFam | Calcium-transporting ATPase | 800 | 1048 | - | - | |
Cone16ag0324 | 1071 | MobiDBLite | consensus disorder prediction | 1 | 33 | - | - | |
Cone16ag0324 | 1071 | Gene3D | - | 472 | 828 | IPR023214 | - | |
Cone16ag0324 | 1071 | FunFam | Calcium-transporting ATPase | 38 | 94 | - | - | |
Cone16ag0324 | 1071 | Pfam | Cation transporting ATPase, C-terminus | 868 | 1044 | IPR006068 | - | |
Cone16ag0324 | 1071 | Gene3D | - | 485 | 683 | IPR023299 | GO:0000166(InterPro) | |
Cone16ag0324 | 1071 | SUPERFAMILY | Calcium ATPase, transduction domain A | 254 | 348 | IPR008250 | - | |
Cone16ag0324 | 1071 | PANTHER | CATION TRANSPORTING ATPASE | 85 | 1046 | - | GO:0005388(PANTHER)|GO:0005887(PANTHER)|GO:0019829(PANTHER)|GO:0043231(PANTHER) | |
Cone16ag0324 | 1071 | FunFam | Calcium-transporting ATPase | 676 | 828 | - | - | |
Cone16ag0324 | 1071 | SUPERFAMILY | Metal cation-transporting ATPase, ATP-binding domain N | 482 | 680 | IPR023299 | GO:0000166(InterPro) | |
Cone16ag0324 | 1071 | FunFam | Calcium-transporting ATPase | 485 | 683 | - | - | |
Cone16ag0324 | 1071 | FunFam | Calcium-transporting ATPase 9 plasma membrane-type | 329 | 499 | - | - | |
Cone16ag0324 | 1071 | Gene3D | - | 38 | 94 | - | - | |
Cone16ag0324 | 1071 | Gene3D | - | 155 | 351 | - | - | |
Cone16ag0324 | 1071 | Pfam | Cation transporter/ATPase, N-terminus | 132 | 200 | IPR004014 | - | |
Cone16ag0324 | 1071 | SUPERFAMILY | HAD-like | 473 | 888 | IPR036412 | - | |
Cone16ag0324 | 1071 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 131 | 1046 | IPR023298 | - | |
Cone16ag0324 | 1071 | NCBIfam | HAD-IC family P-type ATPase | 220 | 391 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
Cone16ag0324 | 1071 | NCBIfam | HAD-IC family P-type ATPase | 412 | 512 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
Cone16ag0324 | 1071 | NCBIfam | HAD-IC family P-type ATPase | 750 | 863 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
Cone16ag0324 | 1071 | NCBIfam | calcium-translocating P-type ATPase, PMCA-type | 123 | 1046 | IPR006408 | GO:0005388(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0070588(InterPro) | |
Cone16ag0324 | 1071 | SFLD | Haloacid Dehalogenase | 457 | 835 | - | - | |
Cone16ag0324 | 1071 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 477 | 483 | IPR018303 | - | |
Cone16ag0324 | 1071 | SFLD | p-type atpase | 457 | 835 | IPR044492 | - | |
Cone16ag0324 | 1071 | Gene3D | - | 183 | 1034 | - | - | |
Cone16ag0324 | 1071 | PRINTS | Sodium/potassium-transporting ATPase signature | 594 | 612 | - | - | |
Cone16ag0324 | 1071 | PRINTS | Sodium/potassium-transporting ATPase signature | 218 | 238 | - | - | |
Cone16ag0324 | 1071 | PRINTS | Sodium/potassium-transporting ATPase signature | 468 | 489 | - | - | |
Cone16ag0324 | 1071 | PRINTS | P-type cation-transporting ATPase superfamily signature | 299 | 313 | - | - | |
Cone16ag0324 | 1071 | PRINTS | P-type cation-transporting ATPase superfamily signature | 807 | 819 | - | - | |
Cone16ag0324 | 1071 | PRINTS | P-type cation-transporting ATPase superfamily signature | 783 | 802 | - | - | |
Cone16ag0324 | 1071 | PRINTS | P-type cation-transporting ATPase superfamily signature | 475 | 489 | - | - | |
Cone16ag0324 | 1071 | PRINTS | P-type cation-transporting ATPase superfamily signature | 676 | 687 | - | - | |
Cone16ag0324 | 1071 | PRINTS | P-type cation-transporting ATPase superfamily signature | 698 | 708 | - | - | |
Cone16ag0324 | 1071 | SMART | Cation_ATPase_N_a_2 | 131 | 205 | IPR004014 | - | |
Cone16ag0324 | 1071 | FunFam | Calcium-transporting ATPase | 230 | 351 | - | - | |
Cone16ag0324 | 1071 | Pfam | haloacid dehalogenase-like hydrolase | 473 | 797 | - | - | |
Cone16ag0324 | 1071 | FunFam | Calcium-transporting ATPase | 183 | 240 | - | - | |
Cone16ag0324 | 1071 | Pfam | E1-E2 ATPase | 253 | 453 | - | - | |
Cone16ag0324 | 1071 | Pfam | Ca2+-ATPase N terminal autoinhibitory domain | 27 | 70 | IPR024750 | GO:0005516(InterPro) | |
Cone16ag0324 | 1071 | CDD | P-type_ATPase_Ca_PMCA-like | 157 | 916 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone16ag0324 | Cone-Chr16:3989076 | Cone17ag0021 | Cone-Chr17:157509 | 0 | dispersed | |
Cone16ag0324 | Cone-Chr16:3989076 | Cone2ag0665 | Cone-Chr2:31727612 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone16ag0324 | K01537 | - | csv:101211703 | 1621.68 |