Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cone16ag0324 ATGAGTAATTTCAAGGAATCGCCGTACCGGAGACGGCGAGATTTGGAGGCCGGAAGTACAGAGGAAGAGGAGTCGTCGTCGGATCCTTTCCATATCACCAGAACGAAGCATGCTTCGGTCGAGCGTCTCAGACGCTGGAGACAAGCTGCACTCGTGCTTAATGCTTCTCGACGATTTCGTTATACGCTAGACTTGAAAAAAGAGGAAGAGAAGAAAGAAGCATTAATGAAGATCAGATCTCATGTCCAAGTCATAAGGGCTGCACATCGCTTCATAGAACTTGGGGTTAACTTGAATGGAAATGTGCCACCCGCGATTTGCAAAGGTGAATCTATTGGACAGGAGCAACTGGCGTCCCTTATGAAAGATCATAATTTATCAGTTCTGGAGGAATATGGAGGGGTTAAAGGGCTCGCTGATATGTTACAAACCAATATAGAGAAGGGGATCAGTGGAGATGATACTGATTTACAGAAACGGAAAGATATGTATGGGTCAAATACCTATCCTCAGAAAAAAGGACGGAGCTTTTGGAGGTTTCTTTGGGAAGCTTGGCAAGATCTCACTTTGATTATATTGATGATAGCTGCAGTGGCTTCTTTAGCGCTGGGCATAAAAACTGAGGGTATCAGGGAAGGTTGGTATGATGGTGGAAGCATTGCCTTTGCAGTTATTCTTGTAATTGTTGTTACAGCTATTAGTGATTACAGGCAATCTCTTCAGTTTCAGAATTTAAATGAGGAAAAGAGAAACATACGTTTGGAGGTCGTTAGGGGTGGTAGAAGAGTGGAGATTTCTATATATGACATTGTGGTCGGTGATGTTGTGCCCCTGAACATTGGCGATCAGGTTCCTGCTGATGGTATCTTAATTCTTGGTCACTCTCTTGCAATTGATGAGTCAAGCATGACTGGAGAGAGCAAGATTGTTAATAAAAATGCAAAGCAACCTTTTCTGATGTCTGGATGCAAAGTAGCTGATGGTAGTGGCACTATGCTGGTCACATGTGTTGGGATAAATACTGAATGGGGATTGCTTATGGCTAGTATTTCAGAAGACACCGGTGAGGAAACACCTTTGCAGGTGCGTCTAAATGGCGTTGCGACTTTTATTGGTATTGTTGGGCTTACTGTTGCTTTTGTTGTCTTGGTTGTCCTCATAGTCAGATACTTCACTGGCCACACAACAAATGCAGAGGGAGATCCTCAGTTTATTGCAGGCAAAACAACGGTTGGCAAAGCCATTGATGGAGTCATTAAGATCATTACTATTGCGGTCACCATTGTAGTAGTTGCAGTACCTGAAGGTCTACCATTAGCTGTCACCTTAACTCTTGCATACTCAATGAGAAAGATGATGGCGGATAAGGCATTGGTGCGAAGACTTTCTGCATGTGAGACAATGGGCTCTGCAACAACAATTTGTAGCGACAAGACTGGAACATTAACTTTGAACCAGATGGCCATTGTTGAGGCATATGCCGGTGGAAAGAAAGTTGAACATCCAGAGAACAAGTCAGAGCTCTCTCAAATGCTGTTGTCTCTACTCGTTGAAGGAATTGCGAATAATACAAATGGAAGTGTTTATTTGGCTGAGGGAGGTGAAGATGTCGAGATTTCTGGTTCACCGACAGAAAAAGCAATCCTCTCCTGGGGCCTTAAGCTGGGAATGAATTTTGAAACTGACCGATCAGAATCTTCCATTCTCCATGTTTTTCCTTTCAACTCAGAGAAAAAGCGAGGTGGTGTTGCAGTACAACAGCCTGACTCTCAAGTTCACATACACTGGAAGGGTGCTGCTGAATTAGTCCTAGCTTCATGCTCTCAGTACTTGGCCACAGACGATTGCTTGGCTGCATTGGATGAAGACAAGAAAATGTATTTCAAGAAAGCAATCGAGGATATGGCTTCTCGTAGTCTGCGTTGTGTAGCCATCGCATACAGAACTTGTGAAATGGAAAACGTTCCAGCTGATGATGAACAATTAAACAAGTGGGCACTACCAGAGGATGACCTCGTCTTGTTGGCCATTGTTGGTATAAAGGACCCTTGTCGACCTGGAGTGAAGGATGCTGTGCAGCTTTGCCAGAATGCGGGTATTAAGGTACGAATGGTCACAGGTGACAACCTGCAGACTGCTAGAGCTATCGCTTTAGAATGTGGCATACTTGGTTCAGATGCAAATGCCAATGAACCAAATCTTATTGAAGGGAGAGTCTTTCGTGAACTGTCTGATACAAGGCGAGAAGAAATTGCTGAACATATATCTGTGATGGGACGGTCCTCTCCCAATGATAAGCTTCTGCTTGTGCAAGCATTAAGAAGGAGGAAACATGTTGTTGCTGTTACTGGAGATGGAACAAATGATGCTCCTGCATTACATGAGGCAGACATTGGTCTTGCAATGGGTATCGCAGGGACTGAAGTCGCGAAGGAAAGCTCTGATATTATTATATTGGATGACAATTTTGCTTCTGTAGTTAAGGTTGTCAGGTGGGGCCGATCTGTGTATGCAAATATCCAGAAGTTCATTCAGTTTCAGTTGACGGTTAACGCTGCTGCTCTTGTCATAAATGTTGTGGCCGCAATTTCTTCAGGCGATGTTCCACTAAATGCAGTGCAGCTTCTTTGGGTTAATCTTATCATGGATACTCTTGGAGCATTGGCATTGGCAACCGAACCACCAACAGATCACCTGATGCACAGGCCGCCAGTTGGTAGAAGGGAACCTCTCATTACAAATATCATGTGGAGGAATTTGCTGATACAGGCCATGTATCAAGTGACAGTTCTTCTAGTCCTCAATTTTCGAGGGACAAGCTTATTGCACTTAGAGGGTAACACCGGTGCACAGAACAAAGTCAAGAATACACTTATATTCAACGCTTTTGTTCTCTGTCAAGTTTTTAACGAGTTCAATGCTCGCAAACCAGATGAAAAGAACATATTCAAAGGTCTTAGCAAAAATAAACTCTTTATTGGAATAGTGGGATTTACTCTTGTGTTACAGGTCATTCTCATCGAGTTTTCAGGAAAGTTTACTGATACCGTCAAGCTCAACTGGAAGCAGTGGTTGATTTGCATTATTATTGGTTTTATCAGTTGGCCTTTATGTCTTGTGGGAAAACTGATACCTGTTCCAGAAACTCCTATGTTTGAGTTCATTACAAAACGGTTTCATAGACAGAGGAATCCTCAAGAGATGGAAGCAGCTTAA 3216 43.22 MSNFKESPYRRRRDLEAGSTEEEESSSDPFHITRTKHASVERLRRWRQAALVLNASRRFRYTLDLKKEEEKKEALMKIRSHVQVIRAAHRFIELGVNLNGNVPPAICKGESIGQEQLASLMKDHNLSVLEEYGGVKGLADMLQTNIEKGISGDDTDLQKRKDMYGSNTYPQKKGRSFWRFLWEAWQDLTLIILMIAAVASLALGIKTEGIREGWYDGGSIAFAVILVIVVTAISDYRQSLQFQNLNEEKRNIRLEVVRGGRRVEISIYDIVVGDVVPLNIGDQVPADGILILGHSLAIDESSMTGESKIVNKNAKQPFLMSGCKVADGSGTMLVTCVGINTEWGLLMASISEDTGEETPLQVRLNGVATFIGIVGLTVAFVVLVVLIVRYFTGHTTNAEGDPQFIAGKTTVGKAIDGVIKIITIAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMAIVEAYAGGKKVEHPENKSELSQMLLSLLVEGIANNTNGSVYLAEGGEDVEISGSPTEKAILSWGLKLGMNFETDRSESSILHVFPFNSEKKRGGVAVQQPDSQVHIHWKGAAELVLASCSQYLATDDCLAALDEDKKMYFKKAIEDMASRSLRCVAIAYRTCEMENVPADDEQLNKWALPEDDLVLLAIVGIKDPCRPGVKDAVQLCQNAGIKVRMVTGDNLQTARAIALECGILGSDANANEPNLIEGRVFRELSDTRREEIAEHISVMGRSSPNDKLLLVQALRRRKHVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNAAALVINVVAAISSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMHRPPVGRREPLITNIMWRNLLIQAMYQVTVLLVLNFRGTSLLHLEGNTGAQNKVKNTLIFNAFVLCQVFNEFNARKPDEKNIFKGLSKNKLFIGIVGFTLVLQVILIEFSGKFTDTVKLNWKQWLICIIIGFISWPLCLVGKLIPVPETPMFEFITKRFHRQRNPQEMEAA 1071
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
16 3989076 4006641 - Conep16aG0267300.1 Cone16ag0324 454758
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cone16ag0324 1071 FunFam Calcium-transporting ATPase 800 1048 - -
Cone16ag0324 1071 MobiDBLite consensus disorder prediction 1 33 - -
Cone16ag0324 1071 Gene3D - 472 828 IPR023214 -
Cone16ag0324 1071 FunFam Calcium-transporting ATPase 38 94 - -
Cone16ag0324 1071 Pfam Cation transporting ATPase, C-terminus 868 1044 IPR006068 -
Cone16ag0324 1071 Gene3D - 485 683 IPR023299 GO:0000166(InterPro)
Cone16ag0324 1071 SUPERFAMILY Calcium ATPase, transduction domain A 254 348 IPR008250 -
Cone16ag0324 1071 PANTHER CATION TRANSPORTING ATPASE 85 1046 - GO:0005388(PANTHER)|GO:0005887(PANTHER)|GO:0019829(PANTHER)|GO:0043231(PANTHER)
Cone16ag0324 1071 FunFam Calcium-transporting ATPase 676 828 - -
Cone16ag0324 1071 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 482 680 IPR023299 GO:0000166(InterPro)
Cone16ag0324 1071 FunFam Calcium-transporting ATPase 485 683 - -
Cone16ag0324 1071 FunFam Calcium-transporting ATPase 9 plasma membrane-type 329 499 - -
Cone16ag0324 1071 Gene3D - 38 94 - -
Cone16ag0324 1071 Gene3D - 155 351 - -
Cone16ag0324 1071 Pfam Cation transporter/ATPase, N-terminus 132 200 IPR004014 -
Cone16ag0324 1071 SUPERFAMILY HAD-like 473 888 IPR036412 -
Cone16ag0324 1071 SUPERFAMILY Calcium ATPase, transmembrane domain M 131 1046 IPR023298 -
Cone16ag0324 1071 NCBIfam HAD-IC family P-type ATPase 220 391 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Cone16ag0324 1071 NCBIfam HAD-IC family P-type ATPase 412 512 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Cone16ag0324 1071 NCBIfam HAD-IC family P-type ATPase 750 863 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Cone16ag0324 1071 NCBIfam calcium-translocating P-type ATPase, PMCA-type 123 1046 IPR006408 GO:0005388(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0070588(InterPro)
Cone16ag0324 1071 SFLD Haloacid Dehalogenase 457 835 - -
Cone16ag0324 1071 ProSitePatterns E1-E2 ATPases phosphorylation site. 477 483 IPR018303 -
Cone16ag0324 1071 SFLD p-type atpase 457 835 IPR044492 -
Cone16ag0324 1071 Gene3D - 183 1034 - -
Cone16ag0324 1071 PRINTS Sodium/potassium-transporting ATPase signature 594 612 - -
Cone16ag0324 1071 PRINTS Sodium/potassium-transporting ATPase signature 218 238 - -
Cone16ag0324 1071 PRINTS Sodium/potassium-transporting ATPase signature 468 489 - -
Cone16ag0324 1071 PRINTS P-type cation-transporting ATPase superfamily signature 299 313 - -
Cone16ag0324 1071 PRINTS P-type cation-transporting ATPase superfamily signature 807 819 - -
Cone16ag0324 1071 PRINTS P-type cation-transporting ATPase superfamily signature 783 802 - -
Cone16ag0324 1071 PRINTS P-type cation-transporting ATPase superfamily signature 475 489 - -
Cone16ag0324 1071 PRINTS P-type cation-transporting ATPase superfamily signature 676 687 - -
Cone16ag0324 1071 PRINTS P-type cation-transporting ATPase superfamily signature 698 708 - -
Cone16ag0324 1071 SMART Cation_ATPase_N_a_2 131 205 IPR004014 -
Cone16ag0324 1071 FunFam Calcium-transporting ATPase 230 351 - -
Cone16ag0324 1071 Pfam haloacid dehalogenase-like hydrolase 473 797 - -
Cone16ag0324 1071 FunFam Calcium-transporting ATPase 183 240 - -
Cone16ag0324 1071 Pfam E1-E2 ATPase 253 453 - -
Cone16ag0324 1071 Pfam Ca2+-ATPase N terminal autoinhibitory domain 27 70 IPR024750 GO:0005516(InterPro)
Cone16ag0324 1071 CDD P-type_ATPase_Ca_PMCA-like 157 916 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone16ag0324 Cone-Chr16:3989076 Cone17ag0021 Cone-Chr17:157509 0 dispersed
Cone16ag0324 Cone-Chr16:3989076 Cone2ag0665 Cone-Chr2:31727612 0 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone16ag0324 K01537 - csv:101211703 1621.68