Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone16ag0330 | ATGGGTCATTTTGCTGCCAAGTCGTTCTTTGCCACGGGTTTCACAATGATACTAATAATCTCATTCACCAAGTGTATATTCCCCACCCTATTCTTATACCTATCTCCAACTACCTTCGCAATCACCATTTCCTTACCTTCACTTGCATTCTACATCTACTTGATCTCCCCCAACAACCGCTCGAATAGTACTCTTCCTCCCGGCCCTCACTCTGTACCAATATTCGGAAATTGGCTCCAAGTTGGAAATGACCTAAACCACCGCCTTCTTGCTGCCATGGTGCAGACCTACGGCTCCATATTCCTACTAAAACTCGGCTCCAAGAACTTAGTCGTTGTGTCAGACCCTGACGCAGCTAACCAAGTCCTCCACACTCAAGGCGTTGAATTTGGGTCTCGCCCCAGAAACGTCGTGTTCGATATATTTACAGGAAATGGACAAGACATGGTGTTCACAATATACGGTGATCATTGGCGGAAAATGCGTAGAATCATGACACTCCCATTTTTCACTAACAAAGTGGTAAATAATTACAGTACTATGTGGGAGGATGAAATTGACTTGGTTGTTCAAGACCTTAGAAATATCGATGAGAACATGATGAAATCAAGAGGGATCGTAATTCGGAAGCGTTTGCAGCTGATGCTGTATAATATAATGTACAGAATGATGTTTGATGCCAAGTTTGAGTCACAAGATGACCCTCTGTTCCTTGAGGCGACCCGGTTTAATTCTGAAAGAAGCAGATTGGCCCAAAGCTTCGATTACAACTACGGAGATTTCATCCCTTTGCTTCGACCGTTTTTGAGGGGGTACTTGAACAAGTGCAGGGATTTGCAGAGTAGAAGATTGGCATTTTTCAACAGCAATTACGTGGAGAAAAGAAGGAAGATAATGGCAGCCAATGGAGAAGCGCACAAAATAAGCTGTGCAATAGATCATATAATAGATGCTCAAATGAAAGGAGAAATCAGTGAAGAGAATGTACTTTACATAGTGGAGAACATAAATGTTGCAGCAATAGAGACAACGTTGTGGTCAATGGAGTGGGCTATAGCTGAACTAGTCAACCATCCAAAAGTCCAACACAAAATCCGGGCCGAAATCGAAACCAAAATCGTTGACAACATTAAAGAATCAAACCTGCATGAACTACCATACTTGATGGCAACAGTGAAAGAAACACTAAGACTACACACCCCTATACCTTTACTGGTACCACATATGAATCTTGAAGAGGCTAAGTTAGGCGGGTACACAATTCCAAAAGAGTCAAAGGTAGTGGTCAATGCATGGTGGTTGGCAAACAGCCCGGAGTGGTGGAAAGATCCGGAAGAGTTTAGGCCAGAGCGGTTCTTGGAAGAAGAGAATGGGACCGAAGCTGCGGTGGCTGGAGGAAAGGTGGATTTTAGGTACTTGCCATTTGGGATGGGTAGGCGGAGCTGCCCTGGAATTATATTGGCAATGCCCATTCTGGGTCTTGTCATTGCCAAATTGGTGAGTAAGTTTGAGTTGAAGAGTCTAGATGGGAAGGAGAAGATTGATGTGAGTGAAAAGGGAGGGCAGTTTAGCCTGCACATAGCTAACCATTCCACAGTGGTGTTTGATCCAATAAATATTGGTTAA | 1626 | 43.67 | MGHFAAKSFFATGFTMILIISFTKCIFPTLFLYLSPTTFAITISLPSLAFYIYLISPNNRSNSTLPPGPHSVPIFGNWLQVGNDLNHRLLAAMVQTYGSIFLLKLGSKNLVVVSDPDAANQVLHTQGVEFGSRPRNVVFDIFTGNGQDMVFTIYGDHWRKMRRIMTLPFFTNKVVNNYSTMWEDEIDLVVQDLRNIDENMMKSRGIVIRKRLQLMLYNIMYRMMFDAKFESQDDPLFLEATRFNSERSRLAQSFDYNYGDFIPLLRPFLRGYLNKCRDLQSRRLAFFNSNYVEKRRKIMAANGEAHKISCAIDHIIDAQMKGEISEENVLYIVENINVAAIETTLWSMEWAIAELVNHPKVQHKIRAEIETKIVDNIKESNLHELPYLMATVKETLRLHTPIPLLVPHMNLEEAKLGGYTIPKESKVVVNAWWLANSPEWWKDPEEFRPERFLEEENGTEAAVAGGKVDFRYLPFGMGRRSCPGIILAMPILGLVIAKLVSKFELKSLDGKEKIDVSEKGGQFSLHIANHSTVVFDPINIG | 541 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 16 | 4189436 | 4191856 | - | Conep16aG0267900.1 | Cone16ag0330 | 454764 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone16ag0330 | 541 | Pfam | Cytochrome P450 | 66 | 529 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone16ag0330 | 541 | Gene3D | Cytochrome P450 | 56 | 532 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone16ag0330 | 541 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 475 | 484 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cone16ag0330 | 541 | PRINTS | P450 superfamily signature | 390 | 401 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone16ag0330 | 541 | PRINTS | P450 superfamily signature | 339 | 356 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone16ag0330 | 541 | PRINTS | P450 superfamily signature | 473 | 482 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone16ag0330 | 541 | PRINTS | E-class P450 group I signature | 472 | 482 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone16ag0330 | 541 | PRINTS | E-class P450 group I signature | 328 | 345 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone16ag0330 | 541 | PRINTS | E-class P450 group I signature | 215 | 233 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone16ag0330 | 541 | PRINTS | E-class P450 group I signature | 389 | 407 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone16ag0330 | 541 | PRINTS | E-class P450 group I signature | 430 | 454 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone16ag0330 | 541 | PRINTS | E-class P450 group I signature | 482 | 505 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone16ag0330 | 541 | PRINTS | E-class P450 group I signature | 94 | 113 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone16ag0330 | 541 | PRINTS | E-class P450 group I signature | 348 | 374 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone16ag0330 | 541 | PRINTS | E-class P450 group I signature | 118 | 139 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone16ag0330 | 541 | SUPERFAMILY | Cytochrome P450 | 66 | 520 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone16ag0330 | 541 | PANTHER | TRANS-CINNAMATE 4-MONOOXYGENASE | 51 | 539 | - | GO:0004497(PANTHER) | |
| Cone16ag0330 | 541 | FunFam | Trans-cinnamate 4-monooxygenase | 55 | 532 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone16ag0330 | Cone-Chr16:4189436 | Cone9ag1520 | Cone-Chr9:11094177 | 7.02E-70 | dispersed | |
| Cone1ag0786 | Cone-Chr1:53867549 | Cone16ag0330 | Cone-Chr16:4189436 | 7.33E-38 | dispersed | |
| Cone1ag0787 | Cone-Chr1:53869225 | Cone16ag0330 | Cone-Chr16:4189436 | 3.04E-41 | dispersed | |
| Cone16ag0330 | Cone-Chr16:4189436 | Cone5ag1037 | Cone-Chr5:4531339 | 7.48E-225 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone16ag0330 | K00487 | - | csv:101205537 | 843.188 |