Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone16ag0333 ATGGGAAGGGGAGGCGGTGAGAAGAGGGAAGAAACCGTGGCGGTGGCGATAGACCGGGACAAAGGAAGCCAGTATGCTCTCAAATGGACTATTGATCATCTTCTTAGCAGAGGCCAAGCTGTTACACTTCTCCATGTCAAATCAAAGCCATCTTCCATTCCCTCTCCAACTGGTAGCAATGTTTCTATTACTGATGTGAATGCAGACGTGGCCAGAGCATATAGACAGCAAATTCAGAATCAAGCCAAGGAATTGTTCCTCACTTTCCGTTGCTTTTGCACAAGAAAGGAGATAAAATGTCAGGAAGTATTACTAGAGGATACAGACATAGCCAAAACCCTAATCAACTACGTTACCACCAATTTGATCCATGTTCTGGTACTGGGTTCATCATCAAGGGGTAGCATTGTCAAAAGGTTCAAGGCAGCAGATGTTCCGAGCAGTGTTTCAAGAGCCGCACCAGATTTCTGTACTGTTTACGTGATTACCAAGGGAAAGATCTCATCGGTCCGATCGGCCACTTGTCCAGCACCTGCTCGGCCTCCGTCTCAGAACCAACTCCAGCACCAAAGCAGCAATGTTTCTGAGCTTTCAGCCGATACGAATCTACTGCAAAACCAATCACCCAGACCAACACCGGCACATCTAGCAGGGAGCTCCCAGCAAGAGGACAGTGAGATCAAGTCACCATTCACAAGGGGAAAGTCTTCAATGAACAAATCATACGAGCCTTCCCTGACTGATTCTGATATATCGTTCGTGAGCAATGGAAGACCCAGTATGGATTGCATTTTTAATCCTTACAAGTTTGAGAGTATGGATTCAACAGCTCGGCCGCCTTCATTCGTCTCAGACTTTGAAAGTACGAGCTTTGCATCGAATTCCTCTGGAAGCAAGTCTCTGGATATGGGATCTTCATGGCTACACTTATCGTCAAGCTCTAATGGAAGCGGTTCCTCATTGTCCTCACAGAATATGGATGAAGTGGAAGCTGAGATGAGGAGGCTCAGGCTAGAACTCAAACAAACCATGGACATGTATAGCACAGCATGCAAGGAAGCAATCACAGCAAAGCAGAAGGCAACGGAACTTCATCGCTGGAAAATGGAGGAAGAACAGAGATTAGAAGATGCAAGACTGGCCGAGGAGGTAGCACTAGCTCTAGCACAGAAGGAGAAAGCCAAGTGTAAAGCTGCCCTAGAGGCAGCTGAGGCTGCAAAGAGGACAGCAGAACTTGAAGCACAGAAAAGAATGAGTATAGAGAGGAATGCTTTCAAAGAATATGAAGAGAGGAAGTCAGAAGGTTTCTCACGTGGAGGTGATATCAGGTACAGGAAATACAGCATAGAGGAGATTGAAGTAGCAACTCAAGACTTCTCAGATTCTCGCAAAATCGGGGAAGGAGGTTATGGACCAGTTTATAGAGGAGAGCTAGATCACACACCTGTTGCAATAAAAGTTCTTCGTCCAGATGCAGCTCAAGGTAGGTCCCAGTTTCAACAAGAGGTTGAAGTATTAAGCTGTATAAGACATCCAAACATGGTTCTCCTCCTAGGAGCCTGTCCTGAATATGGTTGCCTGGTTTACGAATACATGGCTAATGGAAGCTTAGAAGACCGTCTATTCAGACGAGGTAACACTCCAGCTCTTCCATGGCAACTAAGATTCCGTATTGTAGCAGAAATCGGCACTAGCCTTCTTTTCCTTCATCAAACAAAGCCAGAACCGCTTGTACATAGAGATCTCAAACCCGGAAACATATTGCTCGACGGTAACTATGTGAGCAAGATTAGTGACGTTGGATTAGCCAGGCTTGTGCCTCCATCAGTTGCTAATTTTGTAACACAGTATAGAATGACTTCAACAGCAGGGACTTTCTGTTATATTGACCCGGAATACCAGCAAACAGGAATGCTGGGGATAAAATCAGATATCTACTCACTTGGGGTGATGCTTTTGCAAATAATTACGGCCAAGCCACCGATGGGTTTGACTCATCATGTTGAAAGGGCAATTGAAAAGGGAACTTTTGCTGAGATGCTTGACCCGGCTGTTACTGACTGGCCAGTTGAAGAGGCCTTGTCATATGCTAAGCTTGCTCTTCAGTGTGCAGAAATGAGAAAGAAAGACAGGCCAGACCTTGGCAAGGTGGTGCTACCAGAGCTTAATAGATTGAGAGCAATTTCTGAAGAAAGTATTAAAAGTATTTAG 2211 45.36 MGRGGGEKREETVAVAIDRDKGSQYALKWTIDHLLSRGQAVTLLHVKSKPSSIPSPTGSNVSITDVNADVARAYRQQIQNQAKELFLTFRCFCTRKEIKCQEVLLEDTDIAKTLINYVTTNLIHVLVLGSSSRGSIVKRFKAADVPSSVSRAAPDFCTVYVITKGKISSVRSATCPAPARPPSQNQLQHQSSNVSELSADTNLLQNQSPRPTPAHLAGSSQQEDSEIKSPFTRGKSSMNKSYEPSLTDSDISFVSNGRPSMDCIFNPYKFESMDSTARPPSFVSDFESTSFASNSSGSKSLDMGSSWLHLSSSSNGSGSSLSSQNMDEVEAEMRRLRLELKQTMDMYSTACKEAITAKQKATELHRWKMEEEQRLEDARLAEEVALALAQKEKAKCKAALEAAEAAKRTAELEAQKRMSIERNAFKEYEERKSEGFSRGGDIRYRKYSIEEIEVATQDFSDSRKIGEGGYGPVYRGELDHTPVAIKVLRPDAAQGRSQFQQEVEVLSCIRHPNMVLLLGACPEYGCLVYEYMANGSLEDRLFRRGNTPALPWQLRFRIVAEIGTSLLFLHQTKPEPLVHRDLKPGNILLDGNYVSKISDVGLARLVPPSVANFVTQYRMTSTAGTFCYIDPEYQQTGMLGIKSDIYSLGVMLLQIITAKPPMGLTHHVERAIEKGTFAEMLDPAVTDWPVEEALSYAKLALQCAEMRKKDRPDLGKVVLPELNRLRAISEESIKSI 736
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 4250297 4253650 - Conep16aG0268200.1 Cone16ag0333 454767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone16ag0333 736 PANTHER OS02G0152300 PROTEIN 13 731 IPR051348 -
Cone16ag0333 736 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 436 531 - -
Cone16ag0333 736 SMART serkin_6 459 722 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone16ag0333 736 Gene3D Phosphorylase Kinase; domain 1 431 531 - -
Cone16ag0333 736 MobiDBLite consensus disorder prediction 172 250 - -
Cone16ag0333 736 SUPERFAMILY Protein kinase-like (PK-like) 442 718 IPR011009 -
Cone16ag0333 736 FunFam U-box domain-containing protein 51 532 732 - -
Cone16ag0333 736 Coils Coil 326 346 - -
Cone16ag0333 736 ProSiteProfiles Protein kinase domain profile. 459 722 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone16ag0333 736 Pfam Protein kinase domain 460 714 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone16ag0333 736 Pfam Universal stress protein family 12 154 IPR006016 -
Cone16ag0333 736 MobiDBLite consensus disorder prediction 178 250 - -
Cone16ag0333 736 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 12 162 - -
Cone16ag0333 736 ProSitePatterns Serine/Threonine protein kinases active-site signature. 577 589 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone16ag0333 736 Gene3D Transferase(Phosphotransferase) domain 1 532 735 - -
Cone16ag0333 736 Coils Coil 386 413 - -
Cone16ag0333 736 CDD STK_N 12 165 - -
Cone16ag0333 736 Gene3D HUPs 11 164 IPR014729 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone15ag0879 Cone-Chr15:6748632 Cone16ag0333 Cone-Chr16:4250297 3.76E-128 dispersed
Cone16ag0333 Cone-Chr16:4250297 Cone20ag0626 Cone-Chr20:3739895 7.91E-246 dispersed
Cone19ag0162 Cone-Chr19:930016 Cone16ag0333 Cone-Chr16:4250297 9.95E-10 dispersed
Cone9ag1438 Cone-Chr9:10695199 Cone16ag0333 Cone-Chr16:4250297 9.06E-32 dispersed
Cone16ag0333 Cone-Chr16:4250297 Cone20ag1403 Cone-Chr20:8955612 1.34E-264 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82202 PF00254 FKBP_C 3.50E-18 CL0487 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone16ag0333 - - - 0.0