Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone16ag0342 ATGAAGAATCTTCTTAAGAAGCTACATATCATGCCTAATCAATCAGAAGACAATGAAGGGTCTACTTCGTCAAGGCATAGTAACAAGTCTATTGACAGTTCAAATTTATCCCCTGACAAGTCTTTCCCATCTGGGTCCCACCATAATCCAGAGCTTAAACCCTTATCAGGGCTATCTAATTGGTTCAACTCTGTTGCTAATAGACATAGTATTAACTCTAGTCCCCCTAATTCTTCACTTGTGACAACTAGGCATGAGAGAATGGAGCCTTCTGACTCAGTAAATAGTAGCAATGGGTTTGATGTTGTTTCGGTTTCGGATTCAGTGGCACATGATTCAGGTTCGAGTTCGAAGAATTTGAGAGGGCATGAGAAAGAGGAAGAGTATCAGATTCAACTTGCTTTGGAGATGAGTGCTAGGGAAGATCCAGAGGCTGTTCAAATTGAGGCTGTTAAGCAGATTAGTTTGGGGTCTTGTGATCCTCATAACACTCCCGCCGAAATCATTGCTTATCGATACTGGATTTACAATTCCCTTGGCTTTGATGATAAGATCTTGGATGGCTTCTATGATCTATATGAAGTCTTAACTCAATCCACCTCAGAAAGAATGCCTTCCCTTGTAGATCTACAAGGAACACCTGTATCAGAAAGTATCACTTGGGAAGCCATTCTAGTTAATAGAAGCGCTGATGCTAATTTATTAAAACTTGAACAAAAGGCACTAGAAATAGTGATAATGTCAAGGTCAGATTCTCTACTTTGGGTAGATAGAAATTTGGTCAAGAAGCTAGCCATTTTGGTTGCTGACCATATGGGTGGGCCCGTTGGGGACCCGGTTAAGATGTTTAGAAGATGGAAAACTCTTAGTCATGACTTGAAAGCAAGCCTTGGTAGCATGGTTTTGCCTATCGGTTCTTTGACTGTTGGATTGGCTCGTCATCGTGCCTTGTTGTTCAAGCTTTTGGCAGATGGTGTGGGAATTCCATGTAGATTGGTGAAAGGACAGCAATACACTGGGTCTGATGATGTAGCAATGAACTTTGTAAAGATTGATGATGGAAGAGAGTACATCGTTGATCTAATGGCCGATCCGGGCACGCTTATTCCATCAGATATTGCTGGATCACATATAGAATATGGCGAATCTTTCTTTTCTGCCACCTCATTATCTAAAGACCTAGATCCCTCTCATGCAGCCTCCTCAAGCAGTGGTGCCGAAAGTTCAATTGAAGAAAACTTGGCTTCCGGAAAATTGGATAAAAGATCCAGATTCCATATTCCTGATTCTACAATTAAAGAATCTGACGATCAGGGAAAGCTTTCTACTCAGCAAAACCCAATTGGCCTGACAAAATATACGGAGGGATTAAAAAAATCTTCAGACAATAATAAAAACCAGTCCAATCCGGAAAAAATGCAAGTGCATGATATTCCAGAGAGGCCTAATCATCTGTACTTGCACACTAGATCACCTTCATGGACTGAAGGCGTTAGTTCACCAGCTGTCCGGAAAATGAAAGTAAAAGATGTCTCGCAATATATGATCGATGCGGCAAAAGAGAATCCGAAACTGGCTCAGAAGCTTCATGATGTATTGCTCGAAAGTGGTGTCGTTGCTCCCCCAAACTTGTTCACCGAAATATACCATGAAAAAGAGGTTCGGGACGAAGATAATGACAAAGAAGATAAAAGAGCAGTTGCTCCTGTCAACTTTTTACCGCCCTTGCCACCTCCCCATAGATTTCATTCTAAATCAAACCCTATTGATAAAGGGGAAGTGTTGAATGTGAATCTGGTGAAGTTTAAGAGAGAAGTACCGGTTACAGCAGCTGCCGCTGCCGCCGCAGCAGCAGTTGTTGCATCCACAGTGGTGGTTGCAGCGGCAAAATCGAACACGGACAAGAGTTTGGAACTCCCAGTGGCAGCGGCTGCCACAGCAACTGCTGCTGCTGTGGTGGCAACAACGGCTGTGGTGAGCAGTCCAGGTTTTGAAGCACGGGGTGGTAGAGATAATGGTACGGGAGGAGAGAGTTTGGTAGGAGAGAGGGTTTCAGATAGCATGAAATCATCTGACACGGCGCTTGATGATGTGGCGGAGTGTGAAATTCAGTGGGAGGAAATCACCTTGGGTGAGAGAATCGGACTCGGATCATATGGGGAGGTGTATCGTGGAGATTGGCGTGGAACTGAGGTTGCTGTGAAGAAGTTTCTTGACCAAGGTATCTCTGGCGAATCACTTGAAGAGTTCAAAAGTGAGGTTCGAATAATGAAAAAACTAAGGCATCCTAATGTGGTTCTTTTCATGGGAGCTGTAACAAGGGCTCCCAATCTTTCAATCATTACCGAATTTCTTCCCAGGGGTAGTTTATACAGGTTAATTCACCGGCCTAATAATCAACTAGATGAACGAAGGCGTCTAAGGATGGCCCTTGATGCTGCTCGAGGTATGAATTATTTACACAACTGCAGTCCAGTTATTGTCCACCGTGATTTGAAGTCCCCAAATCTCCTTGTCGATAAAAATTGGACTGTAAAGGTATGCGATTTTGGGTTATCTCGAATGAAGCACAGTACATTTCTTTCCACAAGATCAACTGCTGGAACTGCTGAATGGATGGCTCCAGAAGTGCTAAGAAACGAACAAGCAGATGAAAAGTAA 2661 43.25 MKNLLKKLHIMPNQSEDNEGSTSSRHSNKSIDSSNLSPDKSFPSGSHHNPELKPLSGLSNWFNSVANRHSINSSPPNSSLVTTRHERMEPSDSVNSSNGFDVVSVSDSVAHDSGSSSKNLRGHEKEEEYQIQLALEMSAREDPEAVQIEAVKQISLGSCDPHNTPAEIIAYRYWIYNSLGFDDKILDGFYDLYEVLTQSTSERMPSLVDLQGTPVSESITWEAILVNRSADANLLKLEQKALEIVIMSRSDSLLWVDRNLVKKLAILVADHMGGPVGDPVKMFRRWKTLSHDLKASLGSMVLPIGSLTVGLARHRALLFKLLADGVGIPCRLVKGQQYTGSDDVAMNFVKIDDGREYIVDLMADPGTLIPSDIAGSHIEYGESFFSATSLSKDLDPSHAASSSSGAESSIEENLASGKLDKRSRFHIPDSTIKESDDQGKLSTQQNPIGLTKYTEGLKKSSDNNKNQSNPEKMQVHDIPERPNHLYLHTRSPSWTEGVSSPAVRKMKVKDVSQYMIDAAKENPKLAQKLHDVLLESGVVAPPNLFTEIYHEKEVRDEDNDKEDKRAVAPVNFLPPLPPPHRFHSKSNPIDKGEVLNVNLVKFKREVPVTAAAAAAAAAVVASTVVVAAAKSNTDKSLELPVAAAATATAAAVVATTAVVSSPGFEARGGRDNGTGGESLVGERVSDSMKSSDTALDDVAECEIQWEEITLGERIGLGSYGEVYRGDWRGTEVAVKKFLDQGISGESLEEFKSEVRIMKKLRHPNVVLFMGAVTRAPNLSIITEFLPRGSLYRLIHRPNNQLDERRRLRMALDAARGMNYLHNCSPVIVHRDLKSPNLLVDKNWTVKVCDFGLSRMKHSTFLSTRSTAGTAEWMAPEVLRNEQADEK 886
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 4435812 4443406 + Conep16aG0269900.1 Cone16ag0342 454776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone16ag0342 886 MobiDBLite consensus disorder prediction 69 84 - -
Cone16ag0342 886 ProSitePatterns Serine/Threonine protein kinases active-site signature. 827 839 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone16ag0342 886 ProSitePatterns Protein kinases ATP-binding region signature. 714 736 IPR017441 GO:0005524(InterPro)
Cone16ag0342 886 SMART serkin_6 708 886 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone16ag0342 886 MobiDBLite consensus disorder prediction 395 411 - -
Cone16ag0342 886 MobiDBLite consensus disorder prediction 664 692 - -
Cone16ag0342 886 Pfam Ethylene-responsive protein kinase Le-CTR1 166 369 - -
Cone16ag0342 886 MobiDBLite consensus disorder prediction 14 44 - -
Cone16ag0342 886 MobiDBLite consensus disorder prediction 437 473 - -
Cone16ag0342 886 MobiDBLite consensus disorder prediction 1 53 - -
Cone16ag0342 886 SUPERFAMILY Protein kinase-like (PK-like) 695 884 IPR011009 -
Cone16ag0342 886 MobiDBLite consensus disorder prediction 414 436 - -
Cone16ag0342 886 FunFam Serine/threonine-protein kinase isoform 1 699 786 - -
Cone16ag0342 886 ProSiteProfiles Protein kinase domain profile. 708 886 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone16ag0342 886 PANTHER SERINE-THREONINE PROTEIN KINASE 81 886 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
Cone16ag0342 886 Pfam Protein tyrosine and serine/threonine kinase 708 884 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone16ag0342 886 MobiDBLite consensus disorder prediction 69 100 - -
Cone16ag0342 886 Gene3D Transferase(Phosphotransferase) domain 1 787 886 - -
Cone16ag0342 886 Gene3D Phosphorylase Kinase; domain 1 701 785 - -
Cone16ag0342 886 CDD STKc_MAP3K-like 714 886 - -
Cone16ag0342 886 MobiDBLite consensus disorder prediction 395 478 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone16ag0342 Cone-Chr16:4435812 Cone4ag1661 Cone-Chr4:12479695 4.39E-173 dispersed
Cone19ag0331 Cone-Chr19:2671450 Cone16ag0342 Cone-Chr16:4435812 3.10e-310 transposed
Cone16ag0342 Cone-Chr16:4435812 Cone2ag0700 Cone-Chr2:32593335 1.56E-26 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82204 PF00201 UDPGT 1.20E-14 CL0113 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone16ag0342 - - - 0.0