Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone16ag0349 ATGAGAGAAGGGTCTGCAACAATTGGAGATATCGAATTTATGGATAATTTGAGTTGGATTCGGAGTAGGAAGTTCAGACTCAGTGCGAGAGTGGTCCCTGGCTCCAATTATCAAGGTGTTAGGATACGTGAAGCAATGACCGAACCATTCACTGTGAAAGATCATCGTGGAGAATTGTACAAAAAGCATCACCCACCAAGGTTGGAAGATGACGTTTGGCGACTAGAGAAAATTGGTAAGGAAGGTGCTTTTCACAAGAAGTTATCCAAAGAGGGCATCAACACAGTCCAAGACTTTCTAAAGCTGTCCATTGTTCACCCACAAAAGCTCAAAAAGATTTTAGGAGTTGGTGTGTCTGATAAAATATGGGAAGTAACGCTAAAACATGCGAAGACATATGTTATGGGATCCAAACTTTACATTCTAAGAGGATCTGATCATATGCTCATATTTAACCCCATCTGA 465 40.86 MREGSATIGDIEFMDNLSWIRSRKFRLSARVVPGSNYQGVRIREAMTEPFTVKDHRGELYKKHHPPRLEDDVWRLEKIGKEGAFHKKLSKEGINTVQDFLKLSIVHPQKLKKILGVGVSDKIWEVTLKHAKTYVMGSKLYILRGSDHMLIFNPI 154
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 4841641 4843256 + Conep16aG0270600.1 Cone16ag0349 454783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone16ag0349 154 PANTHER OS02G0177800 PROTEIN 1 153 IPR012416 GO:0003700(PANTHER)|GO:0005516(InterPro)|GO:0005634(PANTHER)|GO:0043565(PANTHER)|GO:0080142(PANTHER)
Cone16ag0349 154 Pfam Calmodulin binding protein-like N-terminal domain 1 55 IPR046831 -
Cone16ag0349 154 Pfam Calmodulin binding protein central domain 68 132 IPR046830 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone16ag0349 Cone-Chr16:4841641 Cone6ag1054 Cone-Chr6:6149450 3.52E-57 dispersed
Cone16ag0349 Cone-Chr16:4841641 Cone2ag0732 Cone-Chr2:33001012 3.78E-96 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone16ag0349 - - - 0.0