Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone16ag0355 | ATGGAGCTCAAGAAGGAAAAGCTTGTAAGGTTCTATTCCGATGGGAAACAACAACACGATTTGGCAGTAGTACCTGAGCCATTGCAACTTGAAACATCATCATCATCTTCATTTCTCAGATCCGAATATGGACTAGTGGTACCCGAAAGAAGTATATACAGTCAAACTTTCAGAACCGGAAAGTTAACCATTTTCCCAGTGGACAATTTGCCTTGGTCCACGAGGATTCTCGATCCAAGCAGTGAAATTGTCTTGCAATGGAACTGGGTTTTCATTGTCGCATGCTTAGTCGCTCTTTTTGTCGACCCCTTATACTTTTACTTGCCAGCTTTAGAAAAGGATGTGAACTCATCCTGTGTGAAGATAGACTCTAATTTACGGATCATTGTGACATGTTTTCGGACACTAGCGGATATTTTTTATCTGCTCCATATGGTTATAAAGTTTAGGACAGCATATGTTGCGCCTAGTTCCCGTGTTTTTGGAAGGGGGGAACTTGTTATGGACCCGAAGAAGATTGCTTGTAAGTATATTAGATCGGACTTCTTCATTGATCTTATCGCCACTCTTCCTCTTCCTCAGATTGTTATTTGGTTAATTATACCTGCGACGAGAAGCAGTCAAATGGATCACAAGAACAATGCCCTTGTATTAATTGTTCTGTTTCAATATATACCGAGATTATATTTGATCTTCCCGTTAAGTGCAGAGATAGTTAAAGCGGCTGGATTCGTAACTAAGACTGCATGGGCTGGGGCTGCTTATAATCTCTTGCTTTTTATGTTGGCTAGCCATGTTTTGGGTGCAGCATGGTACTTGCTATCTATTGACCGGTATACCTCGTGCTTGAAATCGCATTGTATAAAAGAGGAATCTCACCCTATGAAATGCCTTCTTAGTTACTTGGATTGTGATACTTTGGGCTACACTGATCGCAAGCTATGGGTAAATGCTACAACTGTTTTTAACAGCTGTGATCCTGATACAAAACATTTCAAGTATGGAATTTTTGAAAAGGCCATGACAAAAAATGTTGTCTCATCTAACTTCGTTAAGAAGTACTTCTACTGCTTATGGTGGGGCTTGCAAAACTTGAGTTCATATGGACAGAATTTATCGACAAGCACTTTCATGGGAGAGACGTTGTTTGCTATTTTAATCGCCATCTTGGGTCTTGTATTATTTGCCCATTTGATTGGAAATATGCAGACATACTTGCAATCTATTACTGTGAGGCTTGAGGAATGGAGGCTTAAGCGAAGAGACACGGAAGAGTGGATGAGACATAGACAACTCCCCGAAGATTTGAAACAGCGGGTCCGCTGTTTTGTTCAGTACAAATGGCTTGCAACTCGAGGAGTCGATGAAGAAACCATCCTCAATAGCTTACCTGCTGATCTTCGTCGTGATATCCAGTGCCACCTATGCTTAAATCTTGTCCGTCGAGTCCCATTTTTCTCTCAAATGGACGATCAACTCCTTGATGCAATATGCGAACGGCTAGTCTCCTCCCTGAGCACAGAAGGAACCTACATAGTCCGAGAAGGCGACCCCGTAACGGAGATGCTCTTCATCATCAGAGGCCGACTAGAGAGCTCCACGACCAATGGAGGCCGGACTGGTTTCTTCAACTCCATAACTTTACGGCCTGGAGACTTTTGCGGTGAAGAGCTACTCACTTGGGCCTTGCTCCCCAAATCCACTATCAACTTGCCTTCTTCAACACGAACTGTTAGGGCCCTCAATAAAGTCGAGGCCTTTGCATTACGGGCCGAAGACCTCAAATTTGTAGCCAATCAATTTAGACGCCTCCATAGCAAGAAATTGCAGCATACTTTCCGGTTTTACTCCCACCATTGGAGGACATGGGCCGCGTGCTTTATTCAGGCGGCTTGGCGTAGGCATAAGAAGAAGATGGTGGCTAAGGATTTATTGGACCGGGAAACATCAGCAGTTGGTTCGGATTCTTCTCAACAAGTGAAGATGAATTTGGGGGTTACGATTCTGGCTTCGGGGTTTGCTGCTAACACTAGGAGAGGGGCCCAGAAGGCAAAAGATGAGATGCCTAAGTTGAGAAAGCCCGACGAGCCTGACTTTTCGGCTGAGGTTGATGAAGGGTAG | 2121 | 43.89 | MELKKEKLVRFYSDGKQQHDLAVVPEPLQLETSSSSSFLRSEYGLVVPERSIYSQTFRTGKLTIFPVDNLPWSTRILDPSSEIVLQWNWVFIVACLVALFVDPLYFYLPALEKDVNSSCVKIDSNLRIIVTCFRTLADIFYLLHMVIKFRTAYVAPSSRVFGRGELVMDPKKIACKYIRSDFFIDLIATLPLPQIVIWLIIPATRSSQMDHKNNALVLIVLFQYIPRLYLIFPLSAEIVKAAGFVTKTAWAGAAYNLLLFMLASHVLGAAWYLLSIDRYTSCLKSHCIKEESHPMKCLLSYLDCDTLGYTDRKLWVNATTVFNSCDPDTKHFKYGIFEKAMTKNVVSSNFVKKYFYCLWWGLQNLSSYGQNLSTSTFMGETLFAILIAILGLVLFAHLIGNMQTYLQSITVRLEEWRLKRRDTEEWMRHRQLPEDLKQRVRCFVQYKWLATRGVDEETILNSLPADLRRDIQCHLCLNLVRRVPFFSQMDDQLLDAICERLVSSLSTEGTYIVREGDPVTEMLFIIRGRLESSTTNGGRTGFFNSITLRPGDFCGEELLTWALLPKSTINLPSSTRTVRALNKVEAFALRAEDLKFVANQFRRLHSKKLQHTFRFYSHHWRTWAACFIQAAWRRHKKKMVAKDLLDRETSAVGSDSSQQVKMNLGVTILASGFAANTRRGAQKAKDEMPKLRKPDEPDFSAEVDEG | 706 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
16 | 5854955 | 5859855 | + | Conep16aG0271200.1 | Cone16ag0355 | 454789 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone16ag0355 | 706 | ProSiteProfiles | cAMP/cGMP binding motif profile. | 485 | 568 | IPR000595 | - | |
Cone16ag0355 | 706 | FunFam | Cyclic nucleotide-gated ion channel 1 | 412 | 476 | - | - | |
Cone16ag0355 | 706 | Pfam | Ion transport protein | 87 | 412 | IPR005821 | GO:0005216(InterPro)|GO:0006811(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cone16ag0355 | 706 | Pfam | Cyclic nucleotide-binding domain | 508 | 597 | IPR000595 | - | |
Cone16ag0355 | 706 | SUPERFAMILY | cAMP-binding domain-like | 415 | 607 | IPR018490 | - | |
Cone16ag0355 | 706 | Gene3D | - | 84 | 411 | - | - | |
Cone16ag0355 | 706 | SUPERFAMILY | Voltage-gated potassium channels | 78 | 407 | - | - | |
Cone16ag0355 | 706 | Gene3D | Helix hairpin bin | 413 | 476 | - | - | |
Cone16ag0355 | 706 | PRINTS | EAG/ELK/ERG potassium channel family signature | 448 | 455 | IPR003938 | GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro) | |
Cone16ag0355 | 706 | PRINTS | EAG/ELK/ERG potassium channel family signature | 380 | 391 | IPR003938 | GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro) | |
Cone16ag0355 | 706 | PRINTS | EAG/ELK/ERG potassium channel family signature | 145 | 154 | IPR003938 | GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro) | |
Cone16ag0355 | 706 | PRINTS | EAG/ELK/ERG potassium channel family signature | 262 | 272 | IPR003938 | GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro) | |
Cone16ag0355 | 706 | PRINTS | EAG/ELK/ERG potassium channel family signature | 398 | 407 | IPR003938 | GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro) | |
Cone16ag0355 | 706 | Gene3D | Jelly Rolls | 483 | 603 | IPR014710 | - | |
Cone16ag0355 | 706 | CDD | CAP_ED | 485 | 616 | IPR000595 | - | |
Cone16ag0355 | 706 | MobiDBLite | consensus disorder prediction | 680 | 699 | - | - | |
Cone16ag0355 | 706 | SMART | cnmp_10 | 485 | 616 | IPR000595 | - | |
Cone16ag0355 | 706 | FunFam | Cyclic nucleotide-gated ion channel 1 | 483 | 601 | - | - | |
Cone16ag0355 | 706 | PANTHER | CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED | 66 | 685 | - | - | |
Cone16ag0355 | 706 | MobiDBLite | consensus disorder prediction | 677 | 706 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone11ag0123 | Cone-Chr11:551157 | Cone16ag0355 | Cone-Chr16:5854955 | 7.33E-116 | dispersed | |
Cone13ag0132 | Cone-Chr13:761986 | Cone16ag0355 | Cone-Chr16:5854955 | 3.64E-277 | dispersed | |
Cone16ag0355 | Cone-Chr16:5854955 | Cone17ag1085 | Cone-Chr17:8084335 | 0 | dispersed | |
Cone16ag0355 | Cone-Chr16:5854955 | Cone2ag0610 | Cone-Chr2:3700486 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone16ag0355 | K27629 | - | csv:101218643 | 1099.35 |