Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone16ag0367 | ATGTTCGTCTATGAAATATTGAACTACTTGTTCACTCACTTATCTCTTTGGGATTTAGTCACAGTCCTACTAGCCCTCTTTATCATCAGTTGCATCATTCAAAAGCTCACAAACAAGGGCCCGATGTTATGGCCAGTGATGGGGATCCTACCATCCTTATTCTTTCATGTAGAAGATATCTACGATTGGGGCACTTATTCTTTGATCAAAGCACAAGGTACCTTTCATTTTAGAGGTATGTGGATGGGAAATGCTCATGGGATCATAACCTCAAATCATTCAAACATTGAGTATATGCTCAAGAAAAGATTCTACAACTTCCCAAAAGGCCATTACCTTAAAGATAGATTTCAAGATTTGCTTGGAGATGGGATTTTCAACGTTGATGGCAAATTGTGGAAGGAGCAAAGGCAATTAGCCATCTCAGAAATGCATGCGAGTTTTTTCGTCAAGCATTCTTTTCTGTCCATGAAATACTTGGTGCATGAAAAGCTTTTAAGATTGATAGAAGAGGTAGTGATTAAAAGGGTGAGTGTCGATTTTCAAGAAGTGCTTCTCCGTTTCACATTCGACAACATTTGCACGGCAGCTTTCGGGGTGGACCCGGACTGTTTGAAGATCGATTTTGATTTCCCGAAAGTTGCTTTCGCTAAAGCTTTTGAAGAAGCCACAGAGTTGAGCCTTCTAAGGTTTTTGCTACCACCTTTTGTATGGAAGCCTATGAAGTTTCTAGGGTTAGGGTATGAGAAGAGGCTTAAAAGAGCAATTGAAGTTGTTCATGAGTTTGCCGAAAAGACAGTGAGTGATAGAAGAAATGAAGTAAAAGATAAGCTTGGGATGAAACTAGATAATAGTTGTCATGATGATCTTTTGTCAAGGCTAATTACGGGGAGGAAAAACATCCAATTTTCAGACAAGTTCTTGAGAGACTTTTGCATAAATTTGATTTTAGCTGGAAGAGACACAAGTTCAGTTGCATTGGCATGGTTCTTTTGGCTCCTAAGTCAAAACCCATTTGAGGAAACAAAAATACTACTTGAAATCAAAGGAATTGTGGGCCAGAGAAAGGTGAATGCAGTCGTTTTTACTGAGGAAGAATTGGAAAAAATGGTGTATTTAAAAGCAGCGTTGACTGAGTCAATGAGACTGTACCCTCCAGTTCCAATAGAGTTTAAAGAAGTGGTTGAAGATGATGTGTTTCCTGATGGGAATATGGTGAAAAAGGGAGATAGGGTTCTTTACAGCATATACTCAATGGGGAGAATGGAGTCGATTTGGGGTAAAGATTGCTTGGAGTTCAAGCCACAAAGGTGGATCAAAGATGGGGTTTTTGCCAGTGACATAAGTAATAGTAACAATCAATTCAAGTATGTTGTGTTTAATGCTGGTCCAAGGCTCTGCTTGGGGAAGAAGTTTGCATATTTGCAGATGAAAATGGTGGCAGCTTCAATCTTGTTGAGGTACGAAGTTCAAGTTATACATCATGAAGGTCATAATGGTGTTGTTCCTAAGTTGAATACCACACTTTACATGAAGAATGGCTTGAAGGTGATCTTCAAGCCTAGGATTGGTGGACAATGCTTAAACTAA | 1590 | 39.25 | MFVYEILNYLFTHLSLWDLVTVLLALFIISCIIQKLTNKGPMLWPVMGILPSLFFHVEDIYDWGTYSLIKAQGTFHFRGMWMGNAHGIITSNHSNIEYMLKKRFYNFPKGHYLKDRFQDLLGDGIFNVDGKLWKEQRQLAISEMHASFFVKHSFLSMKYLVHEKLLRLIEEVVIKRVSVDFQEVLLRFTFDNICTAAFGVDPDCLKIDFDFPKVAFAKAFEEATELSLLRFLLPPFVWKPMKFLGLGYEKRLKRAIEVVHEFAEKTVSDRRNEVKDKLGMKLDNSCHDDLLSRLITGRKNIQFSDKFLRDFCINLILAGRDTSSVALAWFFWLLSQNPFEETKILLEIKGIVGQRKVNAVVFTEEELEKMVYLKAALTESMRLYPPVPIEFKEVVEDDVFPDGNMVKKGDRVLYSIYSMGRMESIWGKDCLEFKPQRWIKDGVFASDISNSNNQFKYVVFNAGPRLCLGKKFAYLQMKMVAASILLRYEVQVIHHEGHNGVVPKLNTTLYMKNGLKVIFKPRIGGQCLN | 529 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 16 | 6047826 | 6049415 | - | Conep16aG0272400.1 | Cone16ag0367 | 454801 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone16ag0367 | 529 | PRINTS | E-class P450 group I signature | 374 | 392 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone16ag0367 | 529 | PRINTS | E-class P450 group I signature | 467 | 490 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone16ag0367 | 529 | PRINTS | E-class P450 group I signature | 327 | 353 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone16ag0367 | 529 | PRINTS | E-class P450 group I signature | 457 | 467 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone16ag0367 | 529 | PRINTS | E-class P450 group I signature | 307 | 324 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone16ag0367 | 529 | Gene3D | Cytochrome P450 | 35 | 523 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone16ag0367 | 529 | SUPERFAMILY | Cytochrome P450 | 40 | 522 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone16ag0367 | 529 | CDD | CYP86A | 75 | 515 | - | - | |
| Cone16ag0367 | 529 | PANTHER | CYTOCHROME P450 | 28 | 515 | - | - | |
| Cone16ag0367 | 529 | Pfam | Cytochrome P450 | 68 | 497 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone16ag0367 | 529 | PRINTS | P450 superfamily signature | 375 | 386 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone16ag0367 | 529 | PRINTS | P450 superfamily signature | 458 | 467 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone16ag0367 | 529 | PRINTS | P450 superfamily signature | 318 | 335 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone16ag0367 | 529 | PRINTS | P450 superfamily signature | 467 | 478 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone16ag0367 | 529 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 460 | 469 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone11ag1211 | Cone-Chr11:9121646 | Cone16ag0367 | Cone-Chr16:6047826 | 5.94E-160 | dispersed | |
| Cone16ag0367 | Cone-Chr16:6047826 | Cone18ag0381 | Cone-Chr18:1846351 | 2.36E-158 | dispersed | |
| Cone16ag0367 | Cone-Chr16:6047826 | Cone2ag0628 | Cone-Chr2:4018481 | 0 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone16ag0367 | - | - | - | 0.0 |