Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone16ag0368 ATGAGTGATTCGAATTGTTATCTAGGAATTTCATGCTTCAGACAGTGTGAGATCTCAATTGAGCAGCAGCAATACGGTATGGATAGCCCTTCCACGATCCAAACTTCTACCCCTAATTTCTCCTCAGGGTCAATTGATGAGAACCCTAGGGTCAAATTTCTTTGTAGTTTTTTAGGGAGTGTAATGCCTCGCCCACAAGATGGGAAACTTAGGTATGTAGGTGGAGAGACGAGGATAGTGAGCGTGCCTCGAGATGTCACGTACGAGGAGTTGATGAGTAAAATGAGAGAGCTATATGAAGATGCTGCTGTGTTGAAATACCAGCAACCTGATGAGGATCTTGATGCTCTTGTCTCAGTTGTGAACAATGATGATGTGATTAACATGATGGAAGAGTATGATAAGTTGGGTTGGAGTGAGGGATTCACTAGGCTAAGAATATTCTTGTTTCCTCGTCCTGATTATGATGGTTCTTCGGTCTTTGTTGAAGGGGATGAGAAGGAATCGGAGCGGAGATATGTTGACGCTCTTAATAATTTAAATGATGTTATGGATTTTAGAAGACAACAACTGCTTGATTCGTCTGTCATCAGCCATCTCGAGGATATTCATGGGACGGACCAGTTCTTTAATCAAGTAAGTCCTTGTGGAAGTCTTCCAAGAAGTTCTGAGCTTTTGCCACAGTATAATCTTAGACACCTTAAGATTCCTCATGTGGGTCTGGGACAAAACCAACTATCTGTTTCTCAGAGGTACAACGAATTGGAAGCTCCATCGAGTCCAGCCTACTATTCTCCAAGGCATCATGGGCATACTGATTCGAGACTGGTGGGAGAATATCCATCTTCTCCTTCTTCTGGATGGTACCGTATGCAATTTTCTGATAAGTATTTTGATAGAGTGCCTGAAGAATATGCTTGCCAAGCACTGAATCACCAGCCTACATGCGAGCACCAACAACAATATGCTGAGAATGTTGTCTGTTATCCAAGTGGAGTTATTACTGGTGAAAAGTCGGGCTTCCCTGGTAACATTCTTCACCGACAAAATGATATGGATGGGATTCATGGGAGTAGGGTTTGTGAGCATTGCAGGATGAATTTCCATAGAAACCCACCTTATACAGAGCATGCCAGCATGATGAATGGACTCTCCCAAGTCTCTAATCTATGTGGCGAGTGTCATCCTTATAGGGAGGCTTCCATGATCAATTCAGATGCAAAGTTGCACCATGGGATTTTCCCCAGTGAGCATAATAACGATCACCGATCTGTCTTGAATTTCCCTAGTGGAACAAATGTCTATCATGGTTCTCCGAATTTTCATCAACAAACTGGTCCAGAATTGGGGAATGAAGTATTTCATGACCAGGGTGTGCCTGGTTTGCCGCACGTACAAACTCCTCCCCATGATGAACGAGGAGTTTTGTATGGAAATTTGCCTTACACTTATGGAGCTGATAGTCATTTACCTCCAGCATCACATGGACATGTACCTGGTATTGCTTTTAGGCGACATATTCATAATCCAGTACATGTGCCTCCCCCTTATGACGTTTCAAATCCTCATCAGGAAGTAAATGGTACTGTTAATATGGGATATATAAGGGGGCCACAAGAGGCTAGTCCAGGGTTTTGTATTCATCCGGACAGTCAAAGTACTTGGGTCGACTCCACACAAAGAATGTTTGGTTTAGATAGAACAACTGCTCCAGAATATTCATACGGGCATGCTTCGAAAATTAACCCGGATGCTCTTGGCCAGGAAAAACAGTGTTTGCTTACTCAGGGCCATATTCAACCTCCACCTGAGAGGCAGAACTTTGCCAGTCCAAGACCCTTGAAGATTCCAAGTCCCTCTTCTTTATTGATTGATGGTGGATTGGTTTCTTCTGTCCTTCCTGTCCCAAATCCACTGTCAGAAACTGACAGCAATGTTACTAAAACTATGGTGTTGGAAAGTGAGAATAGGCTTGGTGAAGGAAAGGAGGCAAGTCACGTGGAGAAGGCTGATAGCTCTAATGTCCAAGCTGTCTCTTATCCAGAAGAAAACCAACTTGCTTGTAGTAATTCTGAGGTGGCACCTCCTAAATCTTCTAATCGTAACTGCTTAAACTCTCCAGTACAAAATGGTGATGTTTTCTTACCGGCTGAAAATCTTTGTGCCCCTGCTGAGGAATCAAAACTATCTTCCAATCGATTGGGTTTACTCCCTCAGTTGATTGCTTCTGTGAAGAGAGCAGCATTAGAAGACTCTGAGGAGATGAAAGGTGTGATTGAAGATATTACACTTGAGGAGCCTGTTACAATAGCCAAGGAAGAAACCAAAAATGAAATAGTATCAATGAATGCTCAGGAGGAATCAGAGTTTGAAATAGATGATGACCATTTAAAATCTTCCAAAATTGAGCCAACAAAGGCAGAGGAAGAGGCTATTTCTAGGGGATTACAGACAATAAAAAATGATGATCTGGAGGAGATCCGGGAGCTGGGATCTGGGACATATGGAGCTGTTTATCACGGGAAATGGAAGGGCTCTGATGTAGCTATAAAAAGAATTAAAGCGAGCTGTTTCTCAGGGCGGCCATCAGAAAGAGAACGTTTGATTGCGGATTTCTGGAAGGAAGCTTTGATCTTAAGCTCTTTGCACCATCCAAATGTTGTTTCTTTCTATGGTATTGTCCGCGATGGTCCTGATGGATCCTTAGCAACTGTGACTGAGTTCATGGTAAATGGATCCTTGAAACAGTTCTTGAGAAAAAAGGACAGAACAATTGACCGTCGTAAGAGACTCATCATAGCTATGGATGCTGCATTTGGGATGGAGTATTTACATGGAAAGAACATTGTACATTTCGATTTGAAATGCGAAAATCTTTTAGTCAACATGAGAGACCCGCAAAGACCTGTTTGCAAGATTGGTGATTTGGGGTTATCAAAGGTTAGGCAACACACCTTAGTGTCGGGTGGTGTTCGTGGAACTTTACCTTGGATGGCACCTGAGCTTCTTAGTGGGAAAAGTAACATGGTAACTGAGAAGATTGATGTTTATTCATTTGGAATTGTTATGTGGGAGGTTCTCACTGGCGATGAACCTTATGCTGATATGCATTGTGCTTCTATAATCGGAGGAATAGTGAACAACACATTACGTCCAGAAACTCCAACGTGGTGTGATCCTGAATGGAAGGCTTTGATGGAAAGTTGTTGGGACTCTGATCCGTCCAAGAGACCATCTTTTGCAGAAATTCCTCAGAAGCTAAGGAACATGGCTGCTGCAATGAATCTCAAATAA 3294 42.68 MSDSNCYLGISCFRQCEISIEQQQYGMDSPSTIQTSTPNFSSGSIDENPRVKFLCSFLGSVMPRPQDGKLRYVGGETRIVSVPRDVTYEELMSKMRELYEDAAVLKYQQPDEDLDALVSVVNNDDVINMMEEYDKLGWSEGFTRLRIFLFPRPDYDGSSVFVEGDEKESERRYVDALNNLNDVMDFRRQQLLDSSVISHLEDIHGTDQFFNQVSPCGSLPRSSELLPQYNLRHLKIPHVGLGQNQLSVSQRYNELEAPSSPAYYSPRHHGHTDSRLVGEYPSSPSSGWYRMQFSDKYFDRVPEEYACQALNHQPTCEHQQQYAENVVCYPSGVITGEKSGFPGNILHRQNDMDGIHGSRVCEHCRMNFHRNPPYTEHASMMNGLSQVSNLCGECHPYREASMINSDAKLHHGIFPSEHNNDHRSVLNFPSGTNVYHGSPNFHQQTGPELGNEVFHDQGVPGLPHVQTPPHDERGVLYGNLPYTYGADSHLPPASHGHVPGIAFRRHIHNPVHVPPPYDVSNPHQEVNGTVNMGYIRGPQEASPGFCIHPDSQSTWVDSTQRMFGLDRTTAPEYSYGHASKINPDALGQEKQCLLTQGHIQPPPERQNFASPRPLKIPSPSSLLIDGGLVSSVLPVPNPLSETDSNVTKTMVLESENRLGEGKEASHVEKADSSNVQAVSYPEENQLACSNSEVAPPKSSNRNCLNSPVQNGDVFLPAENLCAPAEESKLSSNRLGLLPQLIASVKRAALEDSEEMKGVIEDITLEEPVTIAKEETKNEIVSMNAQEESEFEIDDDHLKSSKIEPTKAEEEAISRGLQTIKNDDLEEIRELGSGTYGAVYHGKWKGSDVAIKRIKASCFSGRPSERERLIADFWKEALILSSLHHPNVVSFYGIVRDGPDGSLATVTEFMVNGSLKQFLRKKDRTIDRRKRLIIAMDAAFGMEYLHGKNIVHFDLKCENLLVNMRDPQRPVCKIGDLGLSKVRQHTLVSGGVRGTLPWMAPELLSGKSNMVTEKIDVYSFGIVMWEVLTGDEPYADMHCASIIGGIVNNTLRPETPTWCDPEWKALMESCWDSDPSKRPSFAEIPQKLRNMAAAMNLK 1097
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 6068296 6074384 - Conep16aG0272500.1 Cone16ag0368 454802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone16ag0368 1097 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 912 1097 - -
Cone16ag0368 1097 PRINTS Tyrosine kinase catalytic domain signature 1014 1036 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone16ag0368 1097 PRINTS Tyrosine kinase catalytic domain signature 1058 1080 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone16ag0368 1097 PRINTS Tyrosine kinase catalytic domain signature 906 919 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone16ag0368 1097 PRINTS Tyrosine kinase catalytic domain signature 943 961 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone16ag0368 1097 ProSitePatterns Serine/Threonine protein kinases active-site signature. 949 961 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone16ag0368 1097 CDD PB1_UP2 54 150 - -
Cone16ag0368 1097 SUPERFAMILY Protein kinase-like (PK-like) 812 1085 IPR011009 -
Cone16ag0368 1097 ProSiteProfiles Protein kinase domain profile. 824 1094 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone16ag0368 1097 Pfam Protein tyrosine and serine/threonine kinase 826 1087 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone16ag0368 1097 SUPERFAMILY CAD & PB1 domains 67 158 - -
Cone16ag0368 1097 SMART serkin_6 824 1093 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone16ag0368 1097 Gene3D Phosphorylase Kinase; domain 1 810 910 - -
Cone16ag0368 1097 ProSitePatterns Protein kinases ATP-binding region signature. 830 851 IPR017441 GO:0005524(InterPro)
Cone16ag0368 1097 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 817 911 - -
Cone16ag0368 1097 Gene3D Transferase(Phosphotransferase) domain 1 911 1096 - -
Cone16ag0368 1097 CDD STKc_MAP3K-like 830 1087 - -
Cone16ag0368 1097 Pfam PB1 domain 66 151 IPR000270 GO:0005515(InterPro)
Cone16ag0368 1097 PANTHER SERINE-THREONINE PROTEIN KINASE 31 1091 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
Cone16ag0368 1097 Gene3D - 69 151 - -
Cone16ag0368 1097 SMART PB1_new 65 150 IPR000270 GO:0005515(InterPro)
Cone16ag0368 1097 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 70 152 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone16ag0368 Cone-Chr16:6068296 Cone4ag0386 Cone-Chr4:1751768 1.34E-157 dispersed
Cone8ag1599 Cone-Chr8:11855207 Cone16ag0368 Cone-Chr16:6068296 7.90E-24 dispersed
Cone18ag1310 Cone-Chr18:9105690 Cone16ag0368 Cone-Chr16:6068296 3.42E-94 transposed
Cone16ag0368 Cone-Chr16:6068296 Cone2ag0627 Cone-Chr2:3992967 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82205 PF06200 tify 1.30E-15 No_clan Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone16ag0368 - - - 0.0