Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone16ag0371 ATGTTCTTTAATGCGGAAGCAGCAAATGCTCTGCAACCAGGACCTAAGTTGATATGGCATTATTACAAGCTTAATACAACATGCCCTTATGCCGAGGCTTACATCAAGCACCAAGTCACCTTGTATTGGCAACGTGATAAAACCATCACTGCCAAACTCCTCCGCCTACTTTCGGCCGACTGTCTCTCAAAAAACGGTTGTGATGCATCGATTCTTCTAGATGGAAAAAATTCGGAGAAGACGGCCCTGGAAAATCAACGGCTTGGAGGATTTGATCTAATTGACAAGATCAAAGTTGTTCTTGAAGATAGATGTCCTGGAGTTGTGTCTTGTGCTGATATTCTCAACTTAGCCACCAGGGATGCTGCTCACCTGACAGGTGCACCATCTTATCCTGTTTTTACTGGAAGAAAGGACGGTTTCACATCAAGTGTTAATGATGTGGACTTCCCTTCACCCTCCATTTCAGTACAACAAGCACTTCAATATTTCGAATCCAAAGGCCTAGATGTACAAGACATGACAACACTCCTAGGAGCACATACTATGGGAAAAACACATTGTCAATACATAACTGATCGTCTATACAATTACAAGGGCACTGGAAAACCCGACCCGACAATGGCCTCGTCTTTGCGGGCCCAATTGCAGAAGAAGTGCCCACGAGCAACGAAAATAAGGCAGACCAATCCAACAGTGTTTCTAAACCAACAATCCGGAGGAGCTAATTACAAGTTTACTGGGTCTTACTATACTGGGGTTCTGACTAATAAAGCAGTTTTAGCAGTTGACCAACAGCTTCTTTATGGAAATGACACCGTTCAGTTATCCAAAGAGTTTGCTCCTGCTAGTGGCTTTGAGGATTTAAGAAGGTCATTTGCCCTGTCTATGAGTAGGATGGGCAGTATCAAGGTTTTGACTGGAAATGAAGGAGAGATACGGACTAATTGTCGCCGTAGAAACTAA 966 43.48 MFFNAEAANALQPGPKLIWHYYKLNTTCPYAEAYIKHQVTLYWQRDKTITAKLLRLLSADCLSKNGCDASILLDGKNSEKTALENQRLGGFDLIDKIKVVLEDRCPGVVSCADILNLATRDAAHLTGAPSYPVFTGRKDGFTSSVNDVDFPSPSISVQQALQYFESKGLDVQDMTTLLGAHTMGKTHCQYITDRLYNYKGTGKPDPTMASSLRAQLQKKCPRATKIRQTNPTVFLNQQSGGANYKFTGSYYTGVLTNKAVLAVDQQLLYGNDTVQLSKEFAPASGFEDLRRSFALSMSRMGSIKVLTGNEGEIRTNCRRRN 321
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 6098852 6100961 + Conep16aG0272800.1 Cone16ag0371 454805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone16ag0371 321 FunFam Peroxidase 151 300 - -
Cone16ag0371 321 PANTHER PEROXIDASE 25-RELATED 21 317 IPR000823 GO:0004601(PANTHER)|GO:0004601(InterPro)|GO:0006950(PANTHER)|GO:0006979(InterPro)|GO:0009505(PANTHER)|GO:0009506(PANTHER)|GO:0020037(InterPro)
Cone16ag0371 321 Pfam Peroxidase 37 281 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone16ag0371 321 CDD secretory_peroxidase 16 319 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cone16ag0371 321 PRINTS Haem peroxidase superfamily signature 109 126 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone16ag0371 321 PRINTS Haem peroxidase superfamily signature 127 139 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone16ag0371 321 PRINTS Haem peroxidase superfamily signature 50 64 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone16ag0371 321 PRINTS Haem peroxidase superfamily signature 173 188 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone16ag0371 321 ProSiteProfiles Plant heme peroxidase family profile. 16 321 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone16ag0371 321 ProSitePatterns Peroxidases proximal heme-ligand signature. 173 183 IPR019793 -
Cone16ag0371 321 PRINTS Plant peroxidase signature 172 184 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone16ag0371 321 PRINTS Plant peroxidase signature 52 72 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone16ag0371 321 PRINTS Plant peroxidase signature 89 102 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone16ag0371 321 PRINTS Plant peroxidase signature 253 270 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone16ag0371 321 PRINTS Plant peroxidase signature 295 308 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone16ag0371 321 PRINTS Plant peroxidase signature 28 47 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone16ag0371 321 PRINTS Plant peroxidase signature 108 118 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone16ag0371 321 PRINTS Plant peroxidase signature 127 142 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone16ag0371 321 Gene3D - 21 321 - -
Cone16ag0371 321 SUPERFAMILY Heme-dependent peroxidases 23 321 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone16ag0371 321 Gene3D Peroxidase, domain 2 151 300 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone16ag0371 Cone-Chr16:6098852 Cone19ag0303 Cone-Chr19:2271999 2.74E-73 dispersed
Cone16ag0371 Cone-Chr16:6098852 Cone2ag0624 Cone-Chr2:3952389 3.94E-212 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone16ag0371 K00430 - csv:101213667 446.817