Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone16ag0372 ATGCAAACTAGGTATATGGAGAGGACGAACTCTATGAGGGGGAAAAGGAGCTCGGAGGGTGGAGAAGAGGAGCAACCAGAGCGGAAGCGCCCTGCCCTCGCTAGTGTAATTGTAGAAGCTCTCAAGGTGGATAGTCTACAGAAGCTTTGCTCATCTCTGGAACCCATTCTTCGTAGAGTGGTGAGTGAAGAAGTTGAACGTGCTTTGGCAAAGTTAGGCCCTGCTAGACTCAATGGAAGGTCTTCTCCAAAACGACTTGAAGGTCCTGATGGAAGAAGCCTTCAGCTGCATTTCAGGTCCAGACTAAGCCTTCCAATTTTCACTGGTGGAAAAGTGGAGGGTGAGCAGGGTGCTGCAATTCATATTGTGCTGCTTGATGCCAACTGTGATCGTGTTGTAACTTCTGGACCTGAAGCCTCAGTAAAACTAGATATTATGGTTCTTGAAGGTGACTTTAATAATGAAGATGATGAAGATTGGACACTAGAAGAATTTGAAACCCATGTGGTAAAAGAGCGTGAAGGAAGAAGGCCTTTGTTGACTGGTGATCTGCAGGTTACTCTAAAGGAGGGAGTAGGTACACTGGGTGAGCTCACTTTCACAGATAATTCAAGTTGGATAAGGAGTAGGAAATTCAGACTTGGTTTGAAGGTTGCCTCAGGGTATTCTGAAGGAATTCGCATACGTGAAGCAAAGACTGAAGCATTTACCGTGAAAGATCACAGAGGAGAATTGTACAAGAAACATTATCCTCCATCGCTAAATGATGAAGTATGGAGACTGGAAAAGGTTGGAAAGGATGGAGCATTTCATAAGAGGCTAAATAATAATCAAATATACACAGTTGAAGACTTCCTTCGACTTGTGGTCCGAGATGCACAAAAGTTACGAACTATTCTTGGAAGTGGTATGTCAAACAGGATGTGGGATTCTCTCATTGAGCATGCAAAGACATGTGTCCTGAGTGGGAAGCTTTATATTTATTATCCTGAGGATTCAAGAAATGTCGGAGTTGTTTTCAACAATATCTTTGAACTAAACGGCCTTATTGCAGCGGAGCATTATTTTTCTGCTGATTCTCTTTCTGACAGCCAAAAGGTTTATGTTGATTCGTTGGTGAAGAAAGCTTATGATAATTGGGATGATGTTATAGAGTATGATGGCAAGTCACTTTTGGGTTTCAAGCAAAGCAATAAGTCAAGCACGTCGAGAAATGACTTTGATGTGGGCCACCTTGATATCGCAGGAGCCTTGGATAATGACGCCTCACTGTCACGCCTGCCTGTTTCAGTAACTTCTGAGCAGCCTTTAGTTGATAATGGCCTACCACTTGGAGGATATAATGGTAATATGGCCACAAGATATCCAACCCAATCACAGATTAACAATACAAACTACCGTGCTCGGATTGATAACAGTGCCTCATTTGCTGCTCATGAGTTGTTTGCCAACAATTCTCACCAAGGCCATGGACCAAGAACTGATAATAGCTCTGTGGGTTTAGCCCTTGGCCCTCCTCAACCATCTATATCCTCTTTCCAGGATATCGGCTCTTCTATGCAGCAATCTAACATGAACCCATTTGATGACTGGACCCACAGCCGGGAAAAGGGAGTAGAGGACTTCTTCTCGGAGGAAGAAATCCGTGTTAGAAGCCATGAAATGCTTGAGAATGAAGATATACAGCATTTGCTTAGAATGTTTAGCATGGGAGGCCATACCTCTGTTAATGGGCCTGAAGATGGGTTTTCTCACCCTGCATTCATGCCTTCTCCTATGCCTAATTTCGATGAGGATCGTGGCCGTTCTGGAAAAGCCGTTGTTGGCTGGTTGAAGATTAAAGCTGCAATGAGGTGGGGCTTTTTTGTCCGGAAGAAAGCTGCAGAAAGGCGAGCCCAGATCGTGGAGTTGGACGATGAATAA 1923 44.1 MQTRYMERTNSMRGKRSSEGGEEEQPERKRPALASVIVEALKVDSLQKLCSSLEPILRRVVSEEVERALAKLGPARLNGRSSPKRLEGPDGRSLQLHFRSRLSLPIFTGGKVEGEQGAAIHIVLLDANCDRVVTSGPEASVKLDIMVLEGDFNNEDDEDWTLEEFETHVVKEREGRRPLLTGDLQVTLKEGVGTLGELTFTDNSSWIRSRKFRLGLKVASGYSEGIRIREAKTEAFTVKDHRGELYKKHYPPSLNDEVWRLEKVGKDGAFHKRLNNNQIYTVEDFLRLVVRDAQKLRTILGSGMSNRMWDSLIEHAKTCVLSGKLYIYYPEDSRNVGVVFNNIFELNGLIAAEHYFSADSLSDSQKVYVDSLVKKAYDNWDDVIEYDGKSLLGFKQSNKSSTSRNDFDVGHLDIAGALDNDASLSRLPVSVTSEQPLVDNGLPLGGYNGNMATRYPTQSQINNTNYRARIDNSASFAAHELFANNSHQGHGPRTDNSSVGLALGPPQPSISSFQDIGSSMQQSNMNPFDDWTHSREKGVEDFFSEEEIRVRSHEMLENEDIQHLLRMFSMGGHTSVNGPEDGFSHPAFMPSPMPNFDEDRGRSGKAVVGWLKIKAAMRWGFFVRKKAAERRAQIVELDDE 640
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 6107067 6112386 + Conep16aG0272900.1 Cone16ag0372 454806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone16ag0372 640 PANTHER OS02G0177800 PROTEIN 13 631 IPR012416 GO:0003700(PANTHER)|GO:0005516(InterPro)|GO:0005634(PANTHER)|GO:0043565(PANTHER)|GO:0080142(PANTHER)
Cone16ag0372 640 Pfam Calmodulin binding protein C-terminal domain 324 386 IPR046829 -
Cone16ag0372 640 Pfam Calmodulin binding protein-like N-terminal domain 94 241 IPR046831 -
Cone16ag0372 640 MobiDBLite consensus disorder prediction 1 31 - -
Cone16ag0372 640 MobiDBLite consensus disorder prediction 9 30 - -
Cone16ag0372 640 Pfam Calmodulin binding protein central domain 254 319 IPR046830 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone16ag0125 Cone-Chr16:706271 Cone16ag0372 Cone-Chr16:6107067 4.41E-110 dispersed
Cone16ag0372 Cone-Chr16:6107067 Cone6ag1054 Cone-Chr6:6149450 5.45E-285 dispersed
Cone16ag0372 Cone-Chr16:6107067 Cone2ag0623 Cone-Chr2:3944448 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone16ag0372 - - - 0.0