Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone16ag0380 ATGGAGAATAACATGAGAAACCAATCCCTTTTGATTCTCAGATCATTGACAATACTGCTGTTATTCGTGCTTTCAGATTGCTATGCTCAACACGAGCAACATCATCATAATCATGACCGTCATGGCGATTCAAATAATCAGAACTATCACCGCACTGGATCTTCTAATCAAAATCATGTTTATCACCGTGAATCTATCGATCAAAATCATGTTATTATGGAAAATGAGCTGGTCCAAGTTACTTTGTCGCGTCCGGATGGCAATGTTGTAGGAATTAAATATAACGGTATCAATAATTTACTCGAAACTCATAATTATGAGACTAATAGAGGATATTGGGATATCGTTTGGAATAGACCTGGACAAAACATTTCTCTCGATAGGTTAAGGGGAACCAAATACAAAGTTGTAGTGTCCAATAAAGAACAAGTAGAACTTTCATTTATCAAAACGTGGACTGTTTCCGATGGCAACAAGACAATTCCTTTAAACGTGGATAAAAGGTACGTTATCCGTCGAGGGGTGTCAGGATTTTATACATACGCAATATTTGAACGGCTTAAAGGGTTTCCAGCAATTGAGATGAGTCAAATGACAATTGTTTTTAAACTCTCAAAAGACAAGTTTCACAGTATGGCGGTATCTGACACCATACAAACGATTATGCCAATGCCACAAGATAGAGAGACAGGTCAACGCCTTAATTATGATGAGGCTATTCTTTTAACTAATCCAATCAATCCAAGACTTAAAGGAGAGGTGGATGACAAGTATCAATACACATGTGAAATTAAAGATAATAAACTTCACGGTTGGGTATCTACTAAACCTACCGTTGGATTTTGGATGATCACACCTAGTGATGAATTTCGTACCGGCGGGCCATTGAAGCAAGTCCTTACATCCCACGTAGGCCCAACTACTCTTGCTAGCTTTGCGAGCACCCATTATGTTGGATCGGAGTTGGTTATGAAATTTGAAGAAGGAGAAGCATGGAAAAAGATTTTTGGACCATTTTTTATTTATCTAAATTCTGATAATTCTAATACCGAAGAATCCGCTTTAAAAAATCTCTGGAAAGATGCAAAAAATCAGACGGTAATTGAAGTTAATAATTGGCCATATAATTTTCCACAATCAGAAGATTTTCCTTCTTCCAACCAACGAGGAAGAGTCACCGGTCAATTACTTGTCCATGATAGCTCCATGAAAAACGGACATAGGTGGGCCAATGCCGCTTTCATCGGCTTGGCAGCACCCGGAGAAGCCGGAGCTTGGCAAACAGATCAGTGCAAGGTATTATGTTTACTTTAA 1314 38.51 MENNMRNQSLLILRSLTILLLFVLSDCYAQHEQHHHNHDRHGDSNNQNYHRTGSSNQNHVYHRESIDQNHVIMENELVQVTLSRPDGNVVGIKYNGINNLLETHNYETNRGYWDIVWNRPGQNISLDRLRGTKYKVVVSNKEQVELSFIKTWTVSDGNKTIPLNVDKRYVIRRGVSGFYTYAIFERLKGFPAIEMSQMTIVFKLSKDKFHSMAVSDTIQTIMPMPQDRETGQRLNYDEAILLTNPINPRLKGEVDDKYQYTCEIKDNKLHGWVSTKPTVGFWMITPSDEFRTGGPLKQVLTSHVGPTTLASFASTHYVGSELVMKFEEGEAWKKIFGPFFIYLNSDNSNTEESALKNLWKDAKNQTVIEVNNWPYNFPQSEDFPSSNQRGRVTGQLLVHDSSMKNGHRWANAAFIGLAAPGEAGAWQTDQCKVLCLL 437
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 6163787 6165952 + Conep16aG0273700.1 Cone16ag0380 454814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone16ag0380 437 CDD RGL4_N 69 348 - -
Cone16ag0380 437 SUPERFAMILY Galactose mutarotase-like 68 348 IPR011013 GO:0003824(InterPro)|GO:0005975(InterPro)|GO:0030246(InterPro)
Cone16ag0380 437 PANTHER RHAMNOGALACTURONATE LYASE FAMILY PROTEIN 59 430 IPR051850 -
Cone16ag0380 437 Pfam Rhamnogalacturonate lyase family 55 254 IPR010325 -
Cone16ag0380 437 Gene3D - 26 362 IPR014718 GO:0030246(InterPro)
Cone16ag0380 437 MobiDBLite consensus disorder prediction 35 55 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone16ag0380 Cone-Chr16:6163787 Cone17ag1186 Cone-Chr17:8698186 1.36E-140 dispersed
Cone16ag0380 Cone-Chr16:6163787 Cone6ag1513 Cone-Chr6:11957773 2.42E-183 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone16ag0380 K18195 - csv:101215252 460.299