Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone16ag0385 ATGGGTGGAGGGGGGTTAGATGAATACAAGCCAGCAATGGTTATGTTTGCACTGCAATTCACTTATGCAGGACTTGCTCTCATTACTAGAGCTGCTCTTGTTCAAGGAATGAGTCCTCCAGTCTTTATCTTTTATAGACAAGCCATAGCCACTTTGGTCGTTGCACCTATTTCCTATATTTCAAGGAGAAAATATTCCAATGGTTGTTCAATGGGGTTGAGGAGCTTTTCTCTTATATTTTTGTCCTCTCTAATTGGGGTTACAATAAACCAAAATGTTTATTTTGAGGGTATATATTTGTCTTCATCATCCATGGCAAGTGCAATGGGAAATCTTGTTCCAGCAGTCACATTTGTGATAGCAACAATTACCAGATTGGAGTCATTGGATCTAAAACGCTTGAGGAGCGTTGCAAAGATTATTGGGACATCAATCTGTGTAAGTGGAGCTGTGTCCATGGCCTTGCTTAGGGGTCCCAAGCTACTCAATTCTTTCTTCGCAAGGGAAGCTTATCAGAATTGGCTTCTGGGTTGCCAATTTCTCTTTGCAAGCTGTTGTTGCTGGTCGCTTTGGCTCATTTTGCAGGTTCCTTGCTCTGCAAGTTATCCAGATCACCTCTCTCAGTCAGCTTGGATGTGTTTCTTTGCAACAATTCAATCGGCCATTGTCGCTCTATTCCTAGAGCGGGACCCACGAGCCTGGAATATGCATTCCAATCTTCAAATCTTTTGTTGTTTGTACGCTGGAATCATTGGATCTGGGGTTTCAGTCTTTCTCCAAACGTGGTGCGTTTCACGGAGGGGCCCACTTTTCACTGCAATGTTCAACCCTCTCTGCACAGTTATTGTGACTATACTCGCAGCCCTCTTTCTTCATGAAGAGATTTATACTGGCAGCTTGCTGGGTGCAGTTGGAGTGATCATTGGTTTATATGTTGTGCTATGGGGTAAGGCCAAAGACATTGTAGAGGCTAAGGAAGAAGCTTCCAAGCCTCAAAATGATGATCAGAGCAAACAAGAGGGCCATGAAGAAGAATATTTGCGAATAACAAGTTGTAGAATTGATTTGGAGGAACCTCTCTTGTATTCACATTCTAGTAATTCTATTCTACCTGCTGCCTAA 1122 42.78 MGGGGLDEYKPAMVMFALQFTYAGLALITRAALVQGMSPPVFIFYRQAIATLVVAPISYISRRKYSNGCSMGLRSFSLIFLSSLIGVTINQNVYFEGIYLSSSSMASAMGNLVPAVTFVIATITRLESLDLKRLRSVAKIIGTSICVSGAVSMALLRGPKLLNSFFAREAYQNWLLGCQFLFASCCCWSLWLILQVPCSASYPDHLSQSAWMCFFATIQSAIVALFLERDPRAWNMHSNLQIFCCLYAGIIGSGVSVFLQTWCVSRRGPLFTAMFNPLCTVIVTILAALFLHEEIYTGSLLGAVGVIIGLYVVLWGKAKDIVEAKEEASKPQNDDQSKQEGHEEEYLRITSCRIDLEEPLLYSHSSNSILPAA 373
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 6234013 6236276 + Conep16aG0274200.1 Cone16ag0385 454819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone16ag0385 373 PANTHER WAT1-RELATED PROTEIN 13 330 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Cone16ag0385 373 Pfam EamA-like transporter family 14 142 IPR000620 GO:0016020(InterPro)
Cone16ag0385 373 Pfam EamA-like transporter family 176 314 IPR000620 GO:0016020(InterPro)
Cone16ag0385 373 SUPERFAMILY Multidrug resistance efflux transporter EmrE 45 151 - -
Cone16ag0385 373 SUPERFAMILY Multidrug resistance efflux transporter EmrE 211 318 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone16ag0385 Cone-Chr16:6234013 Cone4ag1395 Cone-Chr4:11243721 2.44E-77 dispersed
Cone16ag0385 Cone-Chr16:6234013 Cone16ag0386 Cone-Chr16:6240361 8.60E-27 tandem
Cone16ag0385 Cone-Chr16:6234013 Cone2ag0600 Cone-Chr2:3590568 1.67E-70 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone16ag0385 - - - 0.0