Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone16ag0510 ATGGGTCCGAATAGAACGTTGAGTTCTTTGAACAATTTGACTTGGAATTTTCCTGTTGATTCTAGATTTAACTACATGGTGAGGCTTCATTTCTGTGAGTTCACACCAGAGTACGTAACCAGACCGGGTGATCGGATGTTCCGAGTGTACTTGAACAGCCAAACGGGCGGCCCAATTGTTGATGTCATTGAAATGGGAGGTGGAGTTGGATCTCCAATTTACATAGACTATGCTGTAATGGTTGGAAGTAATTTGTCTAAATTACAAGAAAGTCTGGTACTTGACCTACAGCCCACTGAAGCAGTCCTCGCAGACGCTATTTTGAGCGGAGTTGAAGTATTCAAACTGAGTAATAATAATAAGAGCCTTTCTGCACCCAATCAAGATAATTTTCTACTCCTCACACCCCCACCTCAAGAACCGTTACCCAGTACTACCAAGAATTCCAAAAAAACAATAATCTTAGCTTCTTCTATTGCTTGCAGCATTAGCTTCATTATCATAGTCTTGCTACTTGGTTTCTTAGCCATGTGGCGTTTGAAACCGAAGAAGAAGAAGAAAAAGAAGAAGAAGAAAAAGAAGAAGAAGAAAAAGAAGAAGAAGAAAAAGAAGAAGAAGAAACCCACTAACGCTAAGTATTCTTCTCTCCCTGAAGAACTGTGCCGAGATTTTACGCTCGATGAAATCAAAGAAGCAACAGATAACTTCGACGACAAGTTAATCATCGGCCGTGGAGGTTTCGGAAATGTATATAGAGGTGTTAAAAATATTGATGATCATCACAAGGCCGAAGTCGCGGCGAAGAGATTGAAAAAAGAGTCCGAACAAGGTGCTGTTGAGTTCAAGACAGAGATAAAGCTGCTCTCTGAGCTCCGATATGTCCACCTCGTCTCTCTGATAGGATATTGTCTCGAAGAAGGAGAGATGATCCTTGTTTACGAGTATATGGAAAACGGCACTCTTCGTGAACATCTGTACGGTATAGACAACGACCCTCTTTCATGGAAAAAAAGGTTAGAAATTTGCATAGGGGCGGCGAGTGGGTTAAACTACCTTCATACGGGCAGGGAGCAACCTATTATCCATCGTGATGTGAAGACGACAAACATTCTTTTGGACGAGAATATGGTCGCTAAGGTTTCTGATTTCGGGTTGTCCAAAATGGGTCAGAACAATAACGCGGTCAGCACGATGGTCAAAGGTACGTGGGGTTATTTGGATCCGGATTATCACCGACATAATCGTGTCACGGAAAAGGCCGACGTGTACTCATTTGGCGTCGTTTTTCTTGAAGTGTTATGTGCAAGAAAACCTTTTGACCGGAGTTTGGAGGATCACGAGCAGTGTAACTTGGCGTTGTGGGCCCGTAAATGTATGGCGGGAGGTATGGTGTATGAGATCATCGATCCTTATCTGATGGCTAGGATTGCGCCAGAGTGTTTCGAGCAATACGTGGACCTCGTTGACAAGTGTTTACGTGATCAGATAATCCAACGGCCGTCGATGAAGGATGTAATGGAGTCGCTTCAATTCATGTTGAAGTTGCAGGAAGAAGCGGATGTGAGGATGGATGAAAATAGTCCACGTGGCGAACATGTTTATCCTGAGGTGACTGGTTTTGTGCCTACGTCAGACAGTTTCATGGGGCTTGTGGATGATGTCGTGGAGGAGGCCGGAGACATGTCTGATGATGATTCTCAGGCTGGGACCATGTTTACGACGACGTTGACTGGGAGTGAGATGACTGGAGCGAGCAATCATATAGGCCACCGTAGAGTTCGACGTGACTCCACTACTTTGTGGGAGAAATTATGCAACTTCTTTTGA 1827 44.06 MGPNRTLSSLNNLTWNFPVDSRFNYMVRLHFCEFTPEYVTRPGDRMFRVYLNSQTGGPIVDVIEMGGGVGSPIYIDYAVMVGSNLSKLQESLVLDLQPTEAVLADAILSGVEVFKLSNNNKSLSAPNQDNFLLLTPPPQEPLPSTTKNSKKTIILASSIACSISFIIIVLLLGFLAMWRLKPKKKKKKKKKKKKKKKKKKKKKKKKKPTNAKYSSLPEELCRDFTLDEIKEATDNFDDKLIIGRGGFGNVYRGVKNIDDHHKAEVAAKRLKKESEQGAVEFKTEIKLLSELRYVHLVSLIGYCLEEGEMILVYEYMENGTLREHLYGIDNDPLSWKKRLEICIGAASGLNYLHTGREQPIIHRDVKTTNILLDENMVAKVSDFGLSKMGQNNNAVSTMVKGTWGYLDPDYHRHNRVTEKADVYSFGVVFLEVLCARKPFDRSLEDHEQCNLALWARKCMAGGMVYEIIDPYLMARIAPECFEQYVDLVDKCLRDQIIQRPSMKDVMESLQFMLKLQEEADVRMDENSPRGEHVYPEVTGFVPTSDSFMGLVDDVVEEAGDMSDDDSQAGTMFTTTLTGSEMTGASNHIGHRRVRRDSTTLWEKLCNFF 608
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 7157368 7159194 + Conep16aG0286900.1 Cone16ag0510 454944
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone16ag0510 608 MobiDBLite consensus disorder prediction 128 147 - -
Cone16ag0510 608 Coils Coil 183 207 - -
Cone16ag0510 608 Gene3D Transferase(Phosphotransferase) domain 1 316 532 - -
Cone16ag0510 608 FunFam receptor-like protein kinase FERONIA 193 315 - -
Cone16ag0510 608 SMART serkin_6 236 512 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone16ag0510 608 MobiDBLite consensus disorder prediction 182 210 - -
Cone16ag0510 608 ProSitePatterns Protein kinases ATP-binding region signature. 242 268 IPR017441 GO:0005524(InterPro)
Cone16ag0510 608 FunFam Receptor-like protein kinase FERONIA 316 530 - -
Cone16ag0510 608 Pfam Malectin-like domain 11 115 IPR024788 -
Cone16ag0510 608 Pfam Protein tyrosine and serine/threonine kinase 242 509 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone16ag0510 608 Gene3D Phosphorylase Kinase; domain 1 188 315 - -
Cone16ag0510 608 MobiDBLite consensus disorder prediction 182 213 - -
Cone16ag0510 608 Gene3D - 4 117 - -
Cone16ag0510 608 PANTHER OS01G0750732 PROTEIN 131 529 IPR050885 -
Cone16ag0510 608 SUPERFAMILY Protein kinase-like (PK-like) 212 515 IPR011009 -
Cone16ag0510 608 ProSiteProfiles Protein kinase domain profile. 236 512 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone16ag0510 608 ProSitePatterns Serine/Threonine protein kinases active-site signature. 360 372 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone16ag0510 Cone-Chr16:7157368 Cone2ag0498 Cone-Chr2:2703256 5.86E-281 dispersed
Cone16ag0510 Cone-Chr16:7157368 Cone16ag0511 Cone-Chr16:7168845 3.18E-21 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82210 PF00344 SecY 3.90E-90 No_clan Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone16ag0510 - - - 0.0