Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone16ag0596 | ATGGCCTTTTTCGCAACCTTGTGCTGTGGAGCTGGTTCGGACCGGGAAACAAGAGATCAGAAGAATACAGACGGCCAGAAAACGTGGAGGGTCTTTACGTTGAAGGAGCTTCAACGGGCGACTAACAATTTCAGTTATGATAACAAGGTCGGAGAAGGCGGATTTGGTAGTGTCTACCGGGGTCAGCTTCGGGATGGATCACAAATTGCAGTGAAGAGACTGAAAGCATGGAGCGACAAGGCGAATCTCGAGTTTTCCATTGAAGTTGAGATATTAGCTCGAGTTCAGCACAAGAATCTTCTAAGTCTGCAGGGCTATTGTGCTGAAGGCCGAGAGCGTTTAATTGTATATGACTACATGCCCAATCTGAGTTTACATTCTCATCTTCACGGCCGCCACTCGATTCAATCTCTCCTTAATTGGGAACGTCGGATGAAAATTGCAATCGGGTCCGCAGAGGGACTAGCGTACCTTCACAACGAAGCAACCCCACATATCCTTCACCGAGACATCAAGGCTAATAACGTACTAATAGACCAGGATTTCGAAGCTCAAGTTGCTGATTTCGGATTTGCAAAACTTATCCCAGACGGTGTCACACATGTCACGACAAAAGTCAAGGGCACACTTGGTTATATTGCTCCGGAGTATGCTATGTTCGGAAAAGCATCTGAGAATTGTGATGTTTATAGTTTCGGAATTCTCCTTCTCGAACTTATAAGCGGGAGAAGACCGATAGATCGAGTGAGTGATACAATGAAACAAATGATTGGGGATTGGGCCTTGCCATTGGCATGTGAGGGGAAGTTTGATGAAATGGTGGATCCTAGGTTGAATGGGAAGTATGTAAGGGAAGAGGTGAAAAGGGTTATTCTTGTTGCACTAGTTTGTGCTCAAATTCAGCGAGAGAGAAGGCCAACCATGGTTGAGGTGGTCAAGCTAGTGAAAGGAGAGTCTAAGGACATGTTTGCTAATGTAGAAGATGATGAATTGTTTAAGATTGATAATCATGTTGCTCCTCGTGAAGAAGACGACATAGAAGTTACGGAAAATAGCTCGGATTTTATATCCGATGAGAAGGAGTCAATAGAGTTATCTAGGACTTCTGGGTGA | 1113 | 44.65 | MAFFATLCCGAGSDRETRDQKNTDGQKTWRVFTLKELQRATNNFSYDNKVGEGGFGSVYRGQLRDGSQIAVKRLKAWSDKANLEFSIEVEILARVQHKNLLSLQGYCAEGRERLIVYDYMPNLSLHSHLHGRHSIQSLLNWERRMKIAIGSAEGLAYLHNEATPHILHRDIKANNVLIDQDFEAQVADFGFAKLIPDGVTHVTTKVKGTLGYIAPEYAMFGKASENCDVYSFGILLLELISGRRPIDRVSDTMKQMIGDWALPLACEGKFDEMVDPRLNGKYVREEVKRVILVALVCAQIQRERRPTMVEVVKLVKGESKDMFANVEDDELFKIDNHVAPREEDDIEVTENSSDFISDEKESIELSRTSG | 370 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
16 | 7751145 | 7752731 | + | Conep16aG0295700.1 | Cone16ag0596 | 455030 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone16ag0596 | 370 | PANTHER | OS01G0750732 PROTEIN | 24 | 335 | IPR050885 | - | |
Cone16ag0596 | 370 | ProSiteProfiles | Protein kinase domain profile. | 44 | 323 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone16ag0596 | 370 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 166 | 178 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone16ag0596 | 370 | ProSitePatterns | Protein kinases ATP-binding region signature. | 50 | 72 | IPR017441 | GO:0005524(InterPro) | |
Cone16ag0596 | 370 | SUPERFAMILY | Protein kinase-like (PK-like) | 25 | 314 | IPR011009 | - | |
Cone16ag0596 | 370 | MobiDBLite | consensus disorder prediction | 342 | 370 | - | - | |
Cone16ag0596 | 370 | Pfam | Protein tyrosine and serine/threonine kinase | 46 | 253 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone16ag0596 | 370 | MobiDBLite | consensus disorder prediction | 353 | 370 | - | - | |
Cone16ag0596 | 370 | Gene3D | Phosphorylase Kinase; domain 1 | 9 | 119 | - | - | |
Cone16ag0596 | 370 | FunFam | PTI1-like tyrosine-protein kinase At3g15890 | 120 | 331 | - | - | |
Cone16ag0596 | 370 | CDD | STKc_IRAK | 50 | 317 | - | - | |
Cone16ag0596 | 370 | SMART | serkin_6 | 44 | 314 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone16ag0596 | 370 | Gene3D | Transferase(Phosphotransferase) domain 1 | 120 | 332 | - | - | |
Cone16ag0596 | 370 | FunFam | PTI1-like tyrosine-protein kinase At3g15890 | 15 | 119 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone16ag0596 | Cone-Chr16:7751145 | Cone16ag0635 | Cone-Chr16:7938966 | 3.97E-216 | dispersed | |
Cone1ag1464 | Cone-Chr1:56998299 | Cone16ag0596 | Cone-Chr16:7751145 | 5.45E-62 | dispersed | |
Cone5ag0453 | Cone-Chr5:1917985 | Cone16ag0596 | Cone-Chr16:7751145 | 2.89E-63 | dispersed | |
Cone16ag0596 | Cone-Chr16:7751145 | Cone16ag0598 | Cone-Chr16:7757238 | 2.26E-89 | proximal | |
Cone13ag0880 | Cone-Chr13:7810409 | Cone16ag0596 | Cone-Chr16:7751145 | 4.96E-78 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
82218 | PF00487 | FA_desaturase | 1.20E-09 | No_clan | Cone | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone16ag0596 | - | - | - | 0.0 |