Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone16ag0611 ATGTCCCTCTACCCTTCTCATCCCCATTCCCTAACGAACGGTTCTCCCTCCCTCCAAAAATTTACCAGGAAAAAAAAAAAAAAAGGAGGAAAGGAGAAGGAGAAGTGGACAGCAATGGCTACAGTAACTTCGGCGGCCGGAATTCAAACCACGGCGTCCGCAATTTCCGCCACCTTCAAACACCTCGGCTTCAATCTCCATCTACCTCAAACCTACGCCATGTTCACTCACCATTCAAATCAGAGTCTTTTGAGCCGCAGCGTTGCTAGAAGAACCCTCACAGTCGCAATGGCCGGTGCTAATACTCCTCTTGAAGTCTTGGTCAAAGCCTCCGTCACTGTCCCTAACAAGCTGGGTGATTGCCCATTTTGCCAAAGGGTACTGCTGACTCTGGAAGAGAAGCATCTGCCTTATGATCCGAAGTTGGTGGATTTGACTCAGAAGCCAGAATGGTTCTTAAAGATCAATCCAGAAGGCAAAGTACCAGTGATCAAACTTGATGAGAAGTGGGTTGCAGATTCAGATGTTATTACTGAATCTCTTGAAGAAAAGTACCAAAATCCGCCTTTGGCTACTCCTCCTGAGAAGCGTGCAGTTGGTTCAAAGATATTCTCCACATTTATTGGTTTCCTTAAAAGTAAGGACCCTAATGATGAAACGGAGAAAGCATTACTTGATGAGCTTAGTTCTTTCAACGATTATATAAAAGAAAATGGTCCTTTCATCAATGGGGAAGAGATTTCTGCGGCGGATTTGTCACTTGGACCAAAGCTGTATCATCTAGAAATCGCTCTTGGTCATTACAAGAATTGGTCAATTCCAGATACCTTGTCGCATGTTAAATCCTATACCAAGAGCCTATTCTCAAGAGAGTCGTTTATTAAAACACGTGCACTGCCTGAGGATGTAATCGCCGGTTGGTATCCGAAAGTTGCTGTTTAA 942 44.27 MSLYPSHPHSLTNGSPSLQKFTRKKKKKGGKEKEKWTAMATVTSAAGIQTTASAISATFKHLGFNLHLPQTYAMFTHHSNQSLLSRSVARRTLTVAMAGANTPLEVLVKASVTVPNKLGDCPFCQRVLLTLEEKHLPYDPKLVDLTQKPEWFLKINPEGKVPVIKLDEKWVADSDVITESLEEKYQNPPLATPPEKRAVGSKIFSTFIGFLKSKDPNDETEKALLDELSSFNDYIKENGPFINGEEISAADLSLGPKLYHLEIALGHYKNWSIPDTLSHVKSYTKSLFSRESFIKTRALPEDVIAGWYPKVAV 313
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 7832131 7834823 + Conep16aG0297200.1 Cone16ag0611 455045
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone16ag0611 313 Gene3D Glutaredoxin 102 190 - -
Cone16ag0611 313 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 167 313 IPR010987 -
Cone16ag0611 313 FunFam Glutathione S-transferase DHAR3 chloroplastic 102 190 - -
Cone16ag0611 313 Gene3D - 191 313 - -
Cone16ag0611 313 SFLD Main (cytGST) 120 287 - -
Cone16ag0611 313 MobiDBLite consensus disorder prediction 1 19 - -
Cone16ag0611 313 CDD GST_N_family 121 182 - -
Cone16ag0611 313 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 111 189 IPR004045 -
Cone16ag0611 313 CDD GST_C_DHAR 190 310 - -
Cone16ag0611 313 FunFam Glutathione S-transferase DHAR3, chloroplastic 191 313 - -
Cone16ag0611 313 Pfam Glutathione S-transferase, N-terminal domain 120 189 IPR004045 -
Cone16ag0611 313 SUPERFAMILY Thioredoxin-like 119 187 IPR036249 -
Cone16ag0611 313 PANTHER GLUTATHIONE S-TRANSFERASE DHAR2-RELATED 104 310 IPR044627 GO:0010731(PANTHER)|GO:0033355(InterPro)|GO:0045174(PANTHER)|GO:0045174(InterPro)|GO:0098869(InterPro)
Cone16ag0611 313 MobiDBLite consensus disorder prediction 1 35 - -
Cone16ag0611 313 SUPERFAMILY GST C-terminal domain-like 200 310 IPR036282 -
Cone16ag0611 313 SFLD Glutathione Transferase (cytosolic) 120 287 IPR040079 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag1106 Cone-Chr11:8611417 Cone16ag0611 Cone-Chr16:7832131 1.08E-48 dispersed
Cone16ag0611 Cone-Chr16:7832131 Cone1ag1319 Cone-Chr1:56385452 4.02E-90 dispersed
Cone16ag0611 Cone-Chr16:7832131 Cone2ag0396 Cone-Chr2:2082661 9.42E-132 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone16ag0611 K21888 - csv:101203335 399.823