Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone16ag0684 ATGGGTATGAGTTCTAACAGAGTGGAAAACCTTGCATGCATGGAAACCATAGTAAGAATCCCATCAAATGATGGTTATCATGATCGGGAAATAATTACCATAAAGCCATCGATGGAGATCCATAGGGTTTGCTCCCCTCCACCTCAGAACACCCTGCAAAAGCTCAAGCACAGGCTGTCTGAGATCTTCTTCCCTGATGATCCATTTCATAGATTCAAGAACCAAACCTGGTTCAGAAAATTTGTTCTGTGTCTTCAGGTTTTGTTCCCTATTTTTCAGTGGGGCCCTGAATACAATTTTGGTCTCCTCAAGTCTGATATTATCTCTGGCCTCACTATTGCCAGCCTTGCTATCCCTCAGGGAATTAGTTACGCAAAGCTTGCAAACTTGCCGCCAATTATTGGACTATATTCAAGCTTTGTGCCACCACTAATATACTCTCTCTTGGGGAGTTCAAGACATCTAGCTGTGGGCCCAGTTTCAATAGCTTCTCTGGTCATGGGGTCCATGCTGAGTGAGATAGTTTCTTACAGTGAAGAGCCAGCTCTTTACCTTAAACTGGCTTTCACTTCTACTTTCTTTGCCGGTTTGTTTCAGGCTTCTTTGGGTTTACTAAGGTTGGGGTTTATGATAGATTTTCTATCAAAAGCAACTCTAGTTGGGTTTACTGCTGGTGCTGCAGTCATTGTTTCATTGCAACAGCTTAAAGGGTTACTTGGGATTGTCCACTTCACTACAAAGATGCAAATTGTCTCTGTCCTCTCCTCTGTTTTCAACAAAAGAAAAGAGTGGTCCTTGGAAACGATTATCATGGGCTTCACTTTCCTTGTCTTTCTTCTCACAACAAGGCATATTAGCACGAGAAAACCGAAGCTATTTTGGGTGTCGGCAGCGGCCCCATTGACATCGGTTATCGTATCAACTCTTGTTGTCTTCCTCCTCAGATCAAAGGTTCCTAGAATCTCAATTATTGGCCACTTGCCCAAGGGATTGAATCCACCATCATCAAACATGCTCTCCTTTTCTGGTCCTCATCTAGCACTTGCTCTCAAAACTGGCCTTGTAACTGGGATCTTATCTCTCACCGAAGGAATTGCAGTTGGGAGGACGTTTGCAGCTATGAAAAACTACCAAGTTGATGGAAATAAGGAAATGATGGCTATTGGCCTTATGAACATGGCTGGTTCTTGCTCTTCATGCTATGTAACCACAGGATCGTTTTCTCGGTCAGCCGTAAACTACAATGCCGGAGCTCAAACGGCAATTTCCAATGTGATATTATCGACTGCTGTCCTAATAACCCTGCTGTTTCTCATGCCCCTTTTCCATTACACCCCGAACGTCATTTTAGCTGCAATCATCACAACTGCCGCAATCGGGTTACTTGACTACCAAGCAGCTTATCGTTTATGGAAAGTAGACAAACTCGATTTCTTGGCTTGTCTTTGTTCTTTCCTTGGAGTTCTCTTCATTTCCGTTCCCCTTGGTCTGGCAATCGCAATTGGAGTTTCGGTTTTCAAGATTCTCCTACATGTGACAAGACCGAACATTGTGACTCTAGGGAATATTCCGGGCACTCACATATACCAAAATGTGAGTAGGTACCGAGAAGCAATGCGGGTCCCATCCTTTCTGATTCTCGCCGTGGAATCTCCGATCTACTTTGCAAATTCAACTTACCTCCGAGAAAGGATTTTAAGATGGGTAAGAGAGGAAGAAGAGAGGATCAAAGCAAACAATGAGAATACACTTAAATGTGTAATCTTAGACATGACCGCTGTGACAGCAATAGACACAAGTGGTATAGAGACAATCTGTGACCTCAAAAAGATGCTGGACAAAAGATCACTGCAGCTTGTTCTAGCAAATCCTACTGGAAATGTGACTGAAAAGCTACACAAATCAAATACTTTGGAATCATTCGGGCTAAATGGGCTCTATCTGTCTGTAATTGAAGCTGTGGCTGATATCAATTCTTTGTGGAGAGCTCATTTATGA 1998 43.04 MGMSSNRVENLACMETIVRIPSNDGYHDREIITIKPSMEIHRVCSPPPQNTLQKLKHRLSEIFFPDDPFHRFKNQTWFRKFVLCLQVLFPIFQWGPEYNFGLLKSDIISGLTIASLAIPQGISYAKLANLPPIIGLYSSFVPPLIYSLLGSSRHLAVGPVSIASLVMGSMLSEIVSYSEEPALYLKLAFTSTFFAGLFQASLGLLRLGFMIDFLSKATLVGFTAGAAVIVSLQQLKGLLGIVHFTTKMQIVSVLSSVFNKRKEWSLETIIMGFTFLVFLLTTRHISTRKPKLFWVSAAAPLTSVIVSTLVVFLLRSKVPRISIIGHLPKGLNPPSSNMLSFSGPHLALALKTGLVTGILSLTEGIAVGRTFAAMKNYQVDGNKEMMAIGLMNMAGSCSSCYVTTGSFSRSAVNYNAGAQTAISNVILSTAVLITLLFLMPLFHYTPNVILAAIITTAAIGLLDYQAAYRLWKVDKLDFLACLCSFLGVLFISVPLGLAIAIGVSVFKILLHVTRPNIVTLGNIPGTHIYQNVSRYREAMRVPSFLILAVESPIYFANSTYLRERILRWVREEEERIKANNENTLKCVILDMTAVTAIDTSGIETICDLKKMLDKRSLQLVLANPTGNVTEKLHKSNTLESFGLNGLYLSVIEAVADINSLWRAHL 665
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 8169836 8173427 + Conep16aG0304500.1 Cone16ag0684 455118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone16ag0684 665 Gene3D STAS domain 514 659 IPR036513 -
Cone16ag0684 665 ProSitePatterns SLC26A transporters signature. 132 153 IPR018045 GO:0008271(InterPro)|GO:0008272(InterPro)
Cone16ag0684 665 Pfam Sulfate permease family 103 482 IPR011547 GO:0016020(InterPro)
Cone16ag0684 665 ProSiteProfiles STAS domain profile. 534 657 IPR002645 -
Cone16ag0684 665 SUPERFAMILY SpoIIaa-like 539 655 IPR036513 -
Cone16ag0684 665 CDD STAS_SulP_like_sulfate_transporter 535 650 - -
Cone16ag0684 665 NCBIfam sulfate permease 90 653 IPR001902 GO:0016020(InterPro)|GO:0055085(InterPro)
Cone16ag0684 665 PANTHER SULFATE TRANSPORTER 78 655 IPR001902 GO:0005887(PANTHER)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cone16ag0684 665 FunFam Sulfate transporter 31 514 659 - -
Cone16ag0684 665 Pfam STAS domain 537 652 IPR002645 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone16ag0684 Cone-Chr16:8169836 Cone19ag0765 Cone-Chr19:6216865 3.35E-272 dispersed
Cone16ag0684 Cone-Chr16:8169836 Cone17ag0187 Cone-Chr17:889603 0 wgd
Cone16ag0684 Cone-Chr16:8169836 Cone2ag0336 Cone-Chr2:1768979 1.57E-184 wgd
Cone16ag0684 Cone-Chr16:8169836 Cone20ag1225 Cone-Chr20:8126898 0 wgd
Cone16ag0684 Cone-Chr16:8169836 Cone7ag0674 Cone-Chr7:3672639 5.05E-189 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone16ag0684 K17471 - cit:102621812 1065.45