Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone16ag0705 ATGGCCAAGATTGCATTTGGACGATTCAATGATTCCTTCGGCTTACCTTCTTTCAAAGCTTATGTAGCTGAGTTCATCTCCACCTTGCTCTTTGTCTTTGCCGGCGTGGGCTCAGCCATAGCTTACAATAAGTTGACATCAAATGCAGCCCTTGATCCGGCGGGGTTAGTTGCGATTGCAATTGCTCATGCTTTTGCTCTCTTTGTGGCGGTGTCTGTGGGTGCTAATATCTCAGGTGGTCATGTCAACCCAGCTGTCACCTTCGGATTGGCTCTTGGTGGCCAGATCACCATCCTCACTGGCATCTTCTACTGGATCGCTCAGCTTCTTGGCTCCATTGTTGCTTGCTTCCTCCTCCAATATGTCAGTGGAGGCTTGACAATTCCAACCCATAGTCTTGCCTCTGGAGTGGGAGCATTTGAAGGAGTGGTCTTTGAGATCATCATCACCTTTGGTTTAGTCTACACTGTCTATGCAACAGCAGCTGATCCCAAGAAGGGCGCTTTGGGCACGATAGCTCCCATTGCCATCGGTTTCATTGTCGGTGCAAACATCTTGGCTGCCGGCCCATTTTCCGGTGGATCGATGAACCCGGCCCGGTCCTTCGGGCCTGCCGTCGTTAGCGGAGACTTCCACGACAACTGGATCTACTGGGTTGGACCCTTGATTGGTGGTGGCATAGCTGGGCTCATCTATGGAAATGTGTTCATTCACTCTCATGAGCATGCTCCCTTGTCGGGGGGTGATTATTGA 753 51.0 MAKIAFGRFNDSFGLPSFKAYVAEFISTLLFVFAGVGSAIAYNKLTSNAALDPAGLVAIAIAHAFALFVAVSVGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVACFLLQYVSGGLTIPTHSLASGVGAFEGVVFEIIITFGLVYTVYATAADPKKGALGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVSGDFHDNWIYWVGPLIGGGIAGLIYGNVFIHSHEHAPLSGGDY 250
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 8283798 8285124 + Conep16aG0306600.1 Cone16ag0705 455139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone16ag0705 250 CDD MIP 19 235 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cone16ag0705 250 PANTHER AQUAPORIN-8 1 241 IPR034294 GO:0006833(PANTHER)|GO:0015250(PANTHER)|GO:0016020(PANTHER)
Cone16ag0705 250 PRINTS Major intrinsic protein family signature 178 200 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cone16ag0705 250 PRINTS Major intrinsic protein family signature 145 163 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cone16ag0705 250 PRINTS Major intrinsic protein family signature 100 119 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cone16ag0705 250 PRINTS Major intrinsic protein family signature 63 87 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cone16ag0705 250 PRINTS Major intrinsic protein family signature 19 38 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cone16ag0705 250 PRINTS Major intrinsic protein family signature 215 235 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cone16ag0705 250 Pfam Major intrinsic protein 17 232 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cone16ag0705 250 NCBIfam MIP family channel protein 23 232 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cone16ag0705 250 ProSitePatterns MIP family signature. 81 89 IPR022357 -
Cone16ag0705 250 Gene3D Glycerol uptake facilitator protein. 2 250 IPR023271 -
Cone16ag0705 250 FunFam Probable aquaporin TIP1-1 2 249 - -
Cone16ag0705 250 SUPERFAMILY Aquaporin-like 16 243 IPR023271 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone15ag0870 Cone-Chr15:6663624 Cone16ag0705 Cone-Chr16:8283798 5.43E-74 dispersed
Cone16ag0705 Cone-Chr16:8283798 Cone1ag0665 Cone-Chr1:6272582 1.19E-99 dispersed
Cone16ag0705 Cone-Chr16:8283798 Cone3ag0242 Cone-Chr3:1297684 4.26E-102 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone16ag0705 K09873 - mdm:103405434 425.631