Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone16ag0733 ATGGAAGACGAAGATGACGGCGTGTCACCTAGTAGTTCAACATTGTCTGATATTCCGACCAAGAAGCTTGCTAGACAGCTGGTTTTCACGGGAGAAGTATCGGAAAATGAAGCATTGCCAGAGAAACCTCCGTTTCACACGGAGTCGCAGCCAGAGATAGCAGTCATACCGGCGGTGCCTCTGGTATCTAATTCTTCAGTGAAGATCGTAAAACCGGACTCGCCAAAGTCAAGACCAAGACTGCATGTTGACACAAAAGATGCTACTCCAAAGAAGCAAAAACAGTGTAATTGTAAGCACTCGCGCTGCCTAAAGTTATATTGTGAGTGTTTTGCATCAGGAATATACTGTGATGGTTGTAATTGTGTAAATTGTTATAACAATGTTGAAAAGGAAGGTGATAGACGAGAAGCTGTAGAAGCTACTTTAGAGCGCAATCCAAATGCGTTTCGACCTAAAATTGCCAGCAGTCCACATGGAAAGCGAGAAATCAGGGAGGATGTTGGGGAGGTTCTTCTGTTGGTAAAGCACAACAAAGGATGTCATTGCAAGAAATCAGGGTGCCTGAAAAAGTACTGTGAGTGCTTCCAAGCCAACATTTTATGCTCCGAAAACTGTAAATGCATGGACTGTAAGAACTTTGAGGGAAGTGAAGAGAGACAGGCCATATTCCATGGAGAATATGGGAACAACATGGCACATATTCAGCAGGCAGCAAATGCTTCCATAACTGGAGCTATTGGGTCCTCTGGCTATGCATCCCCTCCCGTATCCAAGAGAAGGAAACATCAGGAGCTCTTCTCTGGACCCACTTCTAAGGATCCATCCAGTCATAGGCTTGGACAATTTCAACAGGCTAACCATATCAAAGCTTCCATGCCTTTGTCTTCCATCCCAGATGCTCGCAATGGTGGCAATGCAGCTCCAGGCCATGCAAAGCTTACATACAGGTCTTTATTGGCTGACATCATCCAACCACGGGACTTGAAGGAAGTTTGCTCAGTTTTAGTGGTCTTATCCAGTGAAGTTGCAAAGAAGCTAGCAGACCAAAAGAATGCTAAGGAGGAGCAAGCAAAAACTCGAACAGAAACTTCCCTTGCTTCATCAATTGAAGATAAGTTGCAGAGACAGAAGAAATCCGATGAGGAAGTTGCAGTCAATGATGATTGTTCATCAAGTGCAAACCAGGATGGTAAAATCAGCCCTAACGATTCCGATTCTGATGGTCCAGATGTGCCCAAAGAAAGGCCCATGTCTCCTGGAACATTAGCTTTGATGTGTGATGAGCAAGATACAATGTTCATGCCAGCTTCTTCCTCAAATGGATTATTGGGCACATCATCACATTCTACTTCCGGACAAGAGTTGACTGAAGTCCATGCAGAGCAGGAACTGATTGTCCTGACAAAGTTTCGAGAATGTCTTCATAAGCTCATCACTCTTGGAGAGATAAAGGAAAAGTGCTCATTTCTAGCTAGAAATTAA 1485 44.11 MEDEDDGVSPSSSTLSDIPTKKLARQLVFTGEVSENEALPEKPPFHTESQPEIAVIPAVPLVSNSSVKIVKPDSPKSRPRLHVDTKDATPKKQKQCNCKHSRCLKLYCECFASGIYCDGCNCVNCYNNVEKEGDRREAVEATLERNPNAFRPKIASSPHGKREIREDVGEVLLLVKHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFEGSEERQAIFHGEYGNNMAHIQQAANASITGAIGSSGYASPPVSKRRKHQELFSGPTSKDPSSHRLGQFQQANHIKASMPLSSIPDARNGGNAAPGHAKLTYRSLLADIIQPRDLKEVCSVLVVLSSEVAKKLADQKNAKEEQAKTRTETSLASSIEDKLQRQKKSDEEVAVNDDCSSSANQDGKISPNDSDSDGPDVPKERPMSPGTLALMCDEQDTMFMPASSSNGLLGTSSHSTSGQELTEVHAEQELIVLTKFRECLHKLITLGEIKEKCSFLARN 494
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 8445233 8449441 - Conep16aG0309500.1 Cone16ag0733 455167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone16ag0733 494 PANTHER TESMIN/TSO1-RELATED 41 488 IPR028307 GO:0005634(PANTHER)|GO:0006355(PANTHER)
Cone16ag0733 494 MobiDBLite consensus disorder prediction 347 361 - -
Cone16ag0733 494 MobiDBLite consensus disorder prediction 387 403 - -
Cone16ag0733 494 ProSiteProfiles CRC domain profile. 92 216 IPR005172 -
Cone16ag0733 494 SMART CXC_2 91 131 IPR033467 -
Cone16ag0733 494 SMART CXC_2 176 217 IPR033467 -
Cone16ag0733 494 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 179 213 IPR005172 -
Cone16ag0733 494 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 93 128 IPR005172 -
Cone16ag0733 494 MobiDBLite consensus disorder prediction 347 422 - -
Cone16ag0733 494 MobiDBLite consensus disorder prediction 372 386 - -
Cone16ag0733 494 MobiDBLite consensus disorder prediction 252 279 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone16ag0733 Cone-Chr16:8445233 Cone20ag0663 Cone-Chr20:4043960 1.77E-33 dispersed
Cone16ag0733 Cone-Chr16:8445233 Cone2ag0303 Cone-Chr2:1559684 1.31e-317 wgd
Cone16ag0733 Cone-Chr16:8445233 Cone4ag0740 Cone-Chr4:4067839 1.24E-220 wgd
Cone16ag0733 Cone-Chr16:8445233 Cone7ag0677 Cone-Chr7:3722160 1.06E-214 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
44961 PF00168 C2 2.00E-23 CL0154 Cone TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone16ag0733 - - - 0.0