Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone16ag0751 ATGGAGGAAGTGCAGGAGAAGTTCTGTAACGGAGAATCCAAGTCCTTTTCTGTAAATATTCCAAGGATCAAGTTCATAAAGCTCTTCATCAATGGTGAATTCGTCGATTCCGTTTCAGGAAAAACGATGGAGACAATTGATCCAAGAACAGAAGAAGTAATAGCAAACATAAGTGAAGGAGACAAAGAAGATGTCGATTTGGCCGTTAAAGCTGCCCGCCAAGCTTTCGACCATGGGCCTTGGCCTCGCCTCCCCGCCTTCGAGAGAGGACGTATCATGATGAGATTCGCCGACTTGATAGACAAACACGTGGACGAACTGGCATCCTTGGAAACAATCGACGCTGGGAAGCTGTATGCTACGTGCAAGATCATGGACATTCCTGGGGCGGCAGATACTCTGAGATACTACGCGGGCGCAGCGGATAAAATCCATGGGCACGTGTTCAGAATGTCACGTGAGATGCACGGGTACACTTTGCTGGAGCCCATTGGTGTTGTGGGCCATATTATTCCATGGAACTTTCCAACTACAATGTTCTTCTGCAAGGTTAGCCCAGCCTTAGCCGCTGGGTGCACCATGGTCCTCAAACCGGCTGAGCAGACCCCTCTTTCTGCTCTCTTTTATGCTAACCTCGCTAAACTGGCCGGTATACCGGACGGGGTGCTCAATGTTGTGAATGGATTAGGACCAACAGTTGGAGCTGCTATTAGTTCTCACATGGACATTGAGGCAGTGAGTTTTACTGGTTCTACTGAGGTTGGACGTGAGATAATGCACGCTTCAGCAAACAGTAATTTAAAGGTACTGTCACTTGAATTAGGAGGCAAATCCCCCCTCATTATCTTTGATGATGCTGATGTGCTTAAAGCTGCTCAACTTGCTCTATTTGGTATCCTTTTCAACAAGGGAGAGATCTGCGTGGCGAGTTCTCGAGTTTTTGTCCAAGAAGGAATTTACGATGAATTCGTTGAGAAGTTGGTGGAAGAGACAAAATCTTGGATTGTTGGAGACCCTTTTGATCCTCAAGTTAATCAAGGACCTCAGGTGGATAAGCAACAATTTGAGAAGATCCTTTCTTACATCGAACATGGGAAGAGAGAAGGAGCTACACTGTTAACTGGAGGCAAGCCCATTGGGCCGAAAGGATATTACATTGAGCCCACAATATTCACTGATGTTAAGGAAGAAATGGTGATAGCACAGGATGAAATATTTGGGCCTGTACTGTCTCTCATGAAGTTTAGGACAATTGAGGATGCAATAAAGAGTGCAAACAACACGAGGTATGGTCTAGCAGCGGGCATCTTGACCAACAATATAGATATAGCAAACAGAATGACGCGGTCAATACGGGCAGGGTCAATCTGGGTCAACTGCTATTTCGGCTTTGACCGATCCTGCCCGTTTGGAGGGTATAAAATGAGTGGGTTTGGACGAGATTCTGGACTCGAAGCCCTTCACAAATATCTCCAAGTAAAATCTGTTGTCACACCTCTTTATGATTCTCCGTGGCTTTGA 1521 46.02 MEEVQEKFCNGESKSFSVNIPRIKFIKLFINGEFVDSVSGKTMETIDPRTEEVIANISEGDKEDVDLAVKAARQAFDHGPWPRLPAFERGRIMMRFADLIDKHVDELASLETIDAGKLYATCKIMDIPGAADTLRYYAGAADKIHGHVFRMSREMHGYTLLEPIGVVGHIIPWNFPTTMFFCKVSPALAAGCTMVLKPAEQTPLSALFYANLAKLAGIPDGVLNVVNGLGPTVGAAISSHMDIEAVSFTGSTEVGREIMHASANSNLKVLSLELGGKSPLIIFDDADVLKAAQLALFGILFNKGEICVASSRVFVQEGIYDEFVEKLVEETKSWIVGDPFDPQVNQGPQVDKQQFEKILSYIEHGKREGATLLTGGKPIGPKGYYIEPTIFTDVKEEMVIAQDEIFGPVLSLMKFRTIEDAIKSANNTRYGLAAGILTNNIDIANRMTRSIRAGSIWVNCYFGFDRSCPFGGYKMSGFGRDSGLEALHKYLQVKSVVTPLYDSPWL 506
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 8521129 8525148 + Conep16aG0311300.1 Cone16ag0751 455185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone16ag0751 506 Pfam Aldehyde dehydrogenase family 34 496 IPR015590 GO:0016491(InterPro)
Cone16ag0751 506 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 30 494 IPR016162 GO:0016491(InterPro)
Cone16ag0751 506 SUPERFAMILY ALDH-like 20 501 IPR016161 GO:0016491(InterPro)
Cone16ag0751 506 FunFam Aldehyde dehydrogenase3 276 465 - -
Cone16ag0751 506 FunFam ALD5p Mitochondrial aldehyde dehydrogenase 30 290 - -
Cone16ag0751 506 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 26 498 - GO:0004029(PANTHER)
Cone16ag0751 506 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 300 311 IPR016160 GO:0016491(InterPro)
Cone16ag0751 506 FunFam Aldehyde dehydrogenase, putative 468 494 - -
Cone16ag0751 506 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 276 465 IPR016163 GO:0016620(InterPro)
Cone16ag0751 506 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 272 279 IPR029510 GO:0016491(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone16ag0751 Cone-Chr16:8521129 Cone8ag0655 Cone-Chr8:6514282 1.32E-202 dispersed
Cone16ag0751 Cone-Chr16:8521129 Cone4ag0719 Cone-Chr4:3888724 5.34E-300 wgd
Cone16ag0751 Cone-Chr16:8521129 Cone7ag0693 Cone-Chr7:3928633 4.37E-299 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone16ag0751 K12355 - mtr:11409735 794.267