Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone16ag0754 ATGAAGAAGAAGACGAACTTTTCTCTCACGCCTCTCTCTATCCTCCTCCTCATATCTCTCTTTCTATCCACATTTCTCTCTCTCTCTAGCTCAGAAAAGCTCACAATCCGCCATGGAAGCAGCCTCACTGAAGCTGAAGCTCATTACATAAAGCAGCGGCAGCTTCTCTACTACAGGGATGAGTTCGGTGACCGAGGTGAAAAAATAACGATCGACCCATCTTTTGTTTTTGAAAATCAACGGCTGAGAAATGCTTACATAGCATTACAGGCCTGGAAGCAGGCTATCCTCTCTGACCCATATAATCTCACTCAAAATTGGGCCGGCCCAAATGTCTGTAGCTATGAAGGTGTTTTCTGTGCTCCGGCGCTGGATAACCGCACCATCCGTACCGTCGCTGGAATTGACCTCAACCACGGCGACATTGCAGGCTACTTGCCGGAGGAGCTAGGTCTTCTGCAAGATCTTGCATTGTTTCACATCAACTCGAACAGATTCTGCGGAACTGTTCCTCATAAGTTTAAGAAGTTGAAACTGCTCTTCGAATTGGATCTTAGTAACAACCGCTTCGCCGGAAAGTTTCCGGCGGTTGTGCTTCGGCTTCCGGCGTTGAAGTTTCTAGATCTGAGGTTTAATGAATTCGAAGGCACGGTGCCTAAGGAACTGTTCGATAAGGACTTGGACGCGATCTTTATCAATCACAATCGGTTCCGGTTCGAGCTACCGGAAAATTTTGGTAACTCGCCGGTGTCGGTTATCGTCCTTGCAAACAATAAGTTTCACGGCTGTGTTCCGGCGAGCTTGGGCAACATGACGGGGCTGAATGAGATTATTATGATGAACAATGGATTCCGATCCTGTTTGCCGCCTGAGATAGGGTTTTTGAAGAACTTGACCGTATTTGACGTGAGCTATAACGAGCTTCTCGGACCTTTACCGGAGACGATAGGCGGAATGGTTAGCATAGAGCAGTTGAATGTGGCGCATAATCTTCTCTCCGGAAGCATTCCGGAGAGTATTTGTGAACTGCCGAACCTTCAGAACTTTACGTTCTCTTATAATTTCTTCACCGGCGAGCCACCGTCGTGCTTGAGGGTGGCGGATTTCGATGACCGGAGAAATTGTTTGCCTGCGAGGCCGGTTCAGCGGTCGGAGACGCAATGTAAGTCGTTCTTGTCTAAGCCTGTGGATTGTAGTTCGTTTAGCTGTAAAAGGTTTGTTCCGTCTTTGCCGCCACCGCCTCCACCCTCACCTCCGATGGCGCTTTCGCCACCGCCGCCAGTTGTGTTTCAATCGCCGCCGCCTCCTCCACCGAAGTCTTCTAGTTCACCGGTTTACAGAAGACGTCCACCTCCACCACCTTCACCCTCTCCTCCGCCTCCAGTATACTCTCCACCGCCACCGCCACCGCCTTCTCCTCCACCTCCAGTTTACTCTCCACCACCGCCGCCCCCTTCCCCACCTCCACCTCCACCTCCACCATCCCCACCACCACCTATCTCTTCACCGCCGCCACCTCCACCTCCGCCATCACCTCCGCCCCCAGTTTACTCACCACCACCACCACCGCCCCCATCCCCTCCACCACCAGTTTATTTACCACCACCTCCTCCGTCCCCACCTCCACCCTCTCCATCTCCACCTCCACCCGTATATTGTGTTCGGCCATCTCCACCACCTCCGCCACCAAACTCACCACCTCCTCCACCAAATTCACCACCACCACCTCCCCCAATATTCTCTCCACCTCCACCCTTCTACTATTACAGCTCACCACCACCTCCACCACCCCATCACTCACCTCCTCCGCCACCCCACTCACCTCCTCCCCCACCTCACTCACCACCTCCACCTCCTCACTCCCCTCCACCACCAATTTATCCCTACCTATCCCCACCACCTCCACCGCCATCACCTCCACCACCTTCACCATCACCTCCGCCACCGCCTGTCTACTCTCCCCCTCCACCACCACCTTGTATAGAACCACCTCCACCTCCTCCACCATGCATAGAATATTCCGAACCACCACCACCACCTCCATTGCCCACTCCATACTTGCCTCCATCATCACCATCTCCTCCTCCTCCTTACGTTTATGTAAGCCCTCCTCCACCTCCTACACCTGCTTATGAGGGACCATTGCCGCCAATTCAAGGAGTCTCATACGCGTCTCCTCCCCCACCACCTTTCTATTGA 2199 53.16 MKKKTNFSLTPLSILLLISLFLSTFLSLSSSEKLTIRHGSSLTEAEAHYIKQRQLLYYRDEFGDRGEKITIDPSFVFENQRLRNAYIALQAWKQAILSDPYNLTQNWAGPNVCSYEGVFCAPALDNRTIRTVAGIDLNHGDIAGYLPEELGLLQDLALFHINSNRFCGTVPHKFKKLKLLFELDLSNNRFAGKFPAVVLRLPALKFLDLRFNEFEGTVPKELFDKDLDAIFINHNRFRFELPENFGNSPVSVIVLANNKFHGCVPASLGNMTGLNEIIMMNNGFRSCLPPEIGFLKNLTVFDVSYNELLGPLPETIGGMVSIEQLNVAHNLLSGSIPESICELPNLQNFTFSYNFFTGEPPSCLRVADFDDRRNCLPARPVQRSETQCKSFLSKPVDCSSFSCKRFVPSLPPPPPPSPPMALSPPPPVVFQSPPPPPPKSSSSPVYRRRPPPPPSPSPPPPVYSPPPPPPPSPPPPVYSPPPPPPSPPPPPPPPSPPPPISSPPPPPPPPSPPPPVYSPPPPPPPSPPPPVYLPPPPPSPPPPSPSPPPPVYCVRPSPPPPPPNSPPPPPNSPPPPPPIFSPPPPFYYYSSPPPPPPHHSPPPPPHSPPPPPHSPPPPPHSPPPPIYPYLSPPPPPPSPPPPSPSPPPPPVYSPPPPPPCIEPPPPPPPCIEYSEPPPPPPLPTPYLPPSSPSPPPPYVYVSPPPPPTPAYEGPLPPIQGVSYASPPPPPFY 732
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 8541821 8544893 + Conep16aG0311600.1 Cone16ag0754 455188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone16ag0754 732 MobiDBLite consensus disorder prediction 634 653 - -
Cone16ag0754 732 Pfam Leucine rich repeat 157 213 IPR001611 GO:0005515(InterPro)
Cone16ag0754 732 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 20 595 IPR051582 -
Cone16ag0754 732 SUPERFAMILY L domain-like 86 363 - -
Cone16ag0754 732 PRINTS Proline rich extensin signature 464 485 - -
Cone16ag0754 732 PRINTS Proline rich extensin signature 406 418 - -
Cone16ag0754 732 PRINTS Proline rich extensin signature 449 461 - -
Cone16ag0754 732 PRINTS Proline rich extensin signature 421 437 - -
Cone16ag0754 732 MobiDBLite consensus disorder prediction 668 732 - -
Cone16ag0754 732 Gene3D Ribonuclease Inhibitor 86 246 IPR032675 -
Cone16ag0754 732 MobiDBLite consensus disorder prediction 594 624 - -
Cone16ag0754 732 FunFam Leucine-rich repeat extensin-like protein 5 248 387 - -
Cone16ag0754 732 MobiDBLite consensus disorder prediction 411 578 - -
Cone16ag0754 732 FunFam Leucine-rich repeat extensin-like protein 1 86 247 - -
Cone16ag0754 732 Pfam Leucine Rich Repeat 297 319 IPR001611 GO:0005515(InterPro)
Cone16ag0754 732 Pfam Leucine Rich Repeat 321 343 IPR001611 GO:0005515(InterPro)
Cone16ag0754 732 Gene3D Ribonuclease Inhibitor 247 388 IPR032675 -
Cone16ag0754 732 Pfam Leucine rich repeat N-terminal domain 88 120 IPR013210 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone16ag0754 Cone-Chr16:8541821 Cone17ag1306 Cone-Chr17:9298742 3.56E-38 dispersed
Cone16ag0754 Cone-Chr16:8541821 Cone2ag0284 Cone-Chr2:1476204 2.43E-132 wgd
Cone16ag0754 Cone-Chr16:8541821 Cone4ag0716 Cone-Chr4:3857442 1.33E-88 wgd
Cone16ag0754 Cone-Chr16:8541821 Cone4ag1835 Cone-Chr4:13239822 4.47E-57 wgd
Cone16ag0754 Cone-Chr16:8541821 Cone7ag0673 Cone-Chr7:3656919 8.79E-89 wgd
Cone16ag0754 Cone-Chr16:8541821 Cone7ag1740 Cone-Chr7:11517867 2.49E-29 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone16ag0754 - - - 0.0