Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone16ag0765 ATGGCGATGGCGGTTGTTTTCTGGGTATTATTTCTGGCACTGAGTCAGCAACTTAACTCGGAGCCGACTCAGGACAAGCAAGCGCTTCTTGCTTTCTTGGCTCAGACGCCGCATTCGAACCGGGTCAAGTGGAACGTATCCGATTCGGCTTGCAATTGGGTTGGAGTAGGATGCGGTCCCAATCAGTCGTTTGTGTATGAGCTCCGTTTACCCGGTGTTGGGCTTCTGGGCCGGATCCCGCCCAATACAATTGGGCAGCTAAGTCAGCTCCGGGTTCTGAGTCTCCGTTCTAACCGTCTCTCCGGTGAGATCCCCTCCGATTTCTCGAATTTAACATTTCTCCGTAGTCTCTACCTTCAGGTTAATCGATTCTCTGGCGAGTTCCCGACAAGTTTGACTCGGTTGCCTCGGCTTAATCGTCTCGACTTATCCTCCAACAATTTTACTGGTACGATTCCTTTCTCGGTCAACAATCTGACTCGCCTGACCGGACTTTTCTTGGAAAATAACGGATTCTCCGGCCCACTTCCGAGCATTCCATCTGCGAATTTAAGGAGCTTCAATGTATCTAACAACAAGCTAAATGGCTCAATCCCTGAGACGTTAACGAGATTTCCTGAATCCTCCTTCGCCGGAAACTTAGATCTATGCGGCAAACCGTTATCGTCTTGCAGTCCATTAGTTCCGTCTCCCGCTCTGTCACCGTCTGAACAACCTCCGTCAAATCCAGTCAAAAAACACTCCCAGAAGCTTTCAACCGGCGCCATTATCGGAATCGTCATCGGCTGCGCTGTCGTCGCTTTCATCTTGCTTCTACTTCTCATCCTCTGCCTCCGTCGCAGAGGTCGCCGAAAACCGTCGAAAGCACCTAAACCAGTAGCTGCAGCACTATCTGCGCCCGTCGCAGAAGCAGGAACTTCGTCCTCGAAAGACGATCTTACCGCCGAATCAGTGGCGGAGGCGGAGAGAAACAAGCTAGTTTTCTTCGACGGCGGAGGTTACACCTTCGATCTAGAGGATCTATTACGAGCTTCGGCGGAGGTCCTGGGGAAAGGAAGCGTAGGGACGTCGTACAAGGCGGTGCTTGAAGAAGGCACGACAGTTGTCGTTAAGCGGTTAAAAGACGTGGTGGTTACGAAGAAAGAGTTCGAGATCCAAATGGACGCCGTCGGAAAAATCAAGCACGAAAATGTAGTTCCTCTTAGAGCTTTCTACTACTCTAAGGATGAGAAGCTCCTCGTTTTCGATTACATAGCCGCCGGTAGCCTGTCTTCTTCCCTTCACGGGAGTACAGGATCCGGTCGAACGCCACTTGACTGGGACGCCCGAAGAAAAATAGCACTCGGTGCAGCCCGAGGCCTGGCCCACCTACATGGGTCTGGCAAACTTGCCCACGGAAACATAAAATCATCCAACATCCTGCTCCGACCGGACCACATCCCGTGTCTATCAGATTTCGGATTCAACCCGCTTTTTGGGACCGCAACCCCACCGAACCGGGTTGCAGGATATCGGGCCCCGGAAGTAGTCGAGACTCGGAAGGTGACGTTCAAATCCGACGTATACAGTTTCGGCATGTTGCTGTTAGAGCTATTAACAGGAAAAGCACCGAACCAGGCATCGTTAGGCGATCAGGACGGGATCGATCTGCCTAGGTGGGTCCAGTCGGTAGTTAGGGAGGAATGGACGGCGGAGGTGTTTGACGTGGAGTTGATGAGGTATCATAATATCGAGGAGGAGATGGTGCAGCTATTGCAGATCGCGATGTCGTGTGTATCAACCGTACCGGATTCTAGACCCGGTATGGGAAATGTGGTTAAAATGATTGAGGAATTGAGTAGAAGTGGTGGTGAGACGGATGATGGGTTACGACAATCGTCGGAAGACCCTTCAAAGGGATCGGACGGTCATACGCCCCCTGCCGAGTATCGGACCTCTCCTCCACAAGGAGCAGTCACACCGTAA 1965 51.86 MAMAVVFWVLFLALSQQLNSEPTQDKQALLAFLAQTPHSNRVKWNVSDSACNWVGVGCGPNQSFVYELRLPGVGLLGRIPPNTIGQLSQLRVLSLRSNRLSGEIPSDFSNLTFLRSLYLQVNRFSGEFPTSLTRLPRLNRLDLSSNNFTGTIPFSVNNLTRLTGLFLENNGFSGPLPSIPSANLRSFNVSNNKLNGSIPETLTRFPESSFAGNLDLCGKPLSSCSPLVPSPALSPSEQPPSNPVKKHSQKLSTGAIIGIVIGCAVVAFILLLLLILCLRRRGRRKPSKAPKPVAAALSAPVAEAGTSSSKDDLTAESVAEAERNKLVFFDGGGYTFDLEDLLRASAEVLGKGSVGTSYKAVLEEGTTVVVKRLKDVVVTKKEFEIQMDAVGKIKHENVVPLRAFYYSKDEKLLVFDYIAAGSLSSSLHGSTGSGRTPLDWDARRKIALGAARGLAHLHGSGKLAHGNIKSSNILLRPDHIPCLSDFGFNPLFGTATPPNRVAGYRAPEVVETRKVTFKSDVYSFGMLLLELLTGKAPNQASLGDQDGIDLPRWVQSVVREEWTAEVFDVELMRYHNIEEEMVQLLQIAMSCVSTVPDSRPGMGNVVKMIEELSRSGGETDDGLRQSSEDPSKGSDGHTPPAEYRTSPPQGAVTP 654
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 8626927 8629581 + Conep16aG0312800.1 Cone16ag0765 455199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone16ag0765 654 MobiDBLite consensus disorder prediction 613 631 - -
Cone16ag0765 654 Gene3D Ribonuclease Inhibitor 22 180 IPR032675 -
Cone16ag0765 654 Gene3D Transferase(Phosphotransferase) domain 1 418 629 - -
Cone16ag0765 654 SUPERFAMILY L domain-like 25 207 - -
Cone16ag0765 654 Pfam Protein kinase domain 347 607 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone16ag0765 654 MobiDBLite consensus disorder prediction 611 654 - -
Cone16ag0765 654 Pfam Leucine Rich Repeat 183 204 IPR001611 GO:0005515(InterPro)
Cone16ag0765 654 Pfam Leucine Rich Repeat 138 159 IPR001611 GO:0005515(InterPro)
Cone16ag0765 654 SUPERFAMILY Protein kinase-like (PK-like) 347 610 IPR011009 -
Cone16ag0765 654 FunFam pollen receptor-like kinase 1 312 417 - -
Cone16ag0765 654 ProSiteProfiles Protein kinase domain profile. 343 612 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone16ag0765 654 Gene3D Ribonuclease Inhibitor 184 225 IPR032675 -
Cone16ag0765 654 MobiDBLite consensus disorder prediction 228 247 - -
Cone16ag0765 654 Gene3D Phosphorylase Kinase; domain 1 308 417 - -
Cone16ag0765 654 PANTHER OS05G0588300 PROTEIN 7 619 IPR050994 -
Cone16ag0765 654 Pfam Leucine rich repeat N-terminal domain 23 58 IPR013210 -
Cone16ag0765 654 Pfam Leucine rich repeat 68 124 IPR001611 GO:0005515(InterPro)
Cone16ag0765 654 FunFam Probable inactive receptor kinase RLK902 22 180 - -
Cone16ag0765 654 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 418 622 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone16ag0765 Cone-Chr16:8626927 Cone3ag0485 Cone-Chr3:2368876 4.32E-153 dispersed
Cone9ag1522 Cone-Chr9:11106868 Cone16ag0765 Cone-Chr16:8626927 2.14E-39 dispersed
Cone16ag0765 Cone-Chr16:8626927 Cone2ag0274 Cone-Chr2:1410258 1.07e-316 wgd
Cone16ag0765 Cone-Chr16:8626927 Cone20ag0623 Cone-Chr20:3723995 6.52E-66 wgd
Cone16ag0765 Cone-Chr16:8626927 Cone4ag0703 Cone-Chr4:3675336 3.12E-230 wgd
Cone16ag0765 Cone-Chr16:8626927 Cone7ag0668 Cone-Chr7:3576910 6.39E-225 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82226 PF05701 WEMBL 6.60E-26 No_clan Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone16ag0765 - - - 0.0